Pimephales promelas (fathead minnow): 120478741
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Entry
120478741 CDS
T08155
Symbol
npas1
Name
(RefSeq) neuronal PAS domain-containing protein 1
KO
K09098
neuronal PAS domain-containing protein 1/3
Organism
pprm
Pimephales promelas (fathead minnow)
Brite
KEGG Orthology (KO) [BR:
pprm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pprm03000
]
120478741 (npas1)
Transcription factors [BR:
pprm03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Factors with PAS domain
120478741 (npas1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PAS_3
bHLH_HIF1A
PAS
PAS_11
PAS_9
PAS_4
HLH
Motif
Other DBs
NCBI-GeneID:
120478741
NCBI-ProteinID:
XP_039526778
LinkDB
All DBs
Position
Unknown
AA seq
764 aa
AA seq
DB search
MAAMPFVSEGKCVSVEWDFLQGLLAKPPTLPCLQNLRKEKSRNAARSRRGKENFEFFELA
KMLPLPGAITSQLDKASIIRLTISYLHMRHFASQGDPPWSPLMEGENNCNKVRRTSHSLV
TDLFEQHMGAHLLQSLDGFVFVVSQEGRFLYISETVSIYLGLSQVELTGSSVFDYIHPAD
HVEMAERLGIRPHLRAEAGCQTSHESASSSASASSLAGTPEPAPSSPCSPVREFSERGFF
IRMKSTLTKRGLHVKSSGYKVIHVTGRIRCRPALVPGSARPLHRPMGLVALAHTLPPSTL
NEVRMESNMFVFRVNMDLQISYCENRISEYMDLSPAEVVGQTCYNFIHAEDLDTIRLSHE
DLLRKGQVVTGYYRWLQKRGGYLWIQSCATVSINHKAPHERNVIWVNYVLSRTELADMPL
DLSQLPESLRAERLQASSSPRDTSPKAQGSTATQPLKGRAETDHKGKEPFSHTAASQSEN
TRKRSHQSDPESGPPEVRRRIEVFRQREDSPCTSSDQASDSEVEEDDERVSEWDHNPSSK
RVKSEDNKQGNGANGAGKIHNGRAVIQHLKSVVTSSGSNIKTEQEVIGTTLGAGSGRRWS
QPQHSGVGTNGSSPPSQPPTEAPPKGLFNPPSPTLSPPILASSLPRDERSIHGGRAPDFE
LLQRLTASGAAGRVLFHPLALGPQGPQSLYAPSTIRYAPPEMPTAHADGHHSDHVVKTPA
FFPHLQRIASLPPFSGFSPAEPTFPPSLPFCMNGLRGAAGTDED
NT seq
2295 nt
NT seq
+upstream
nt +downstream
nt
atggcggccatgccgttcgtcagcgaggggaagtgtgtgagtgtggagtgggatttctta
cagggactactcgccaaaccacccaccttaccctgcttgcagaatttgaggaaggagaag
tctcgcaatgcagctcgttctcggcggggtaaagagaacttcgagttctttgagctggcg
aagatgcttcctctccccggggcgattaccagccagctggacaaggcctccatcatccgc
ctcaccatcagttacctgcacatgagacactttgccagccagggagacccaccctggagc
cctctaatggagggagagaacaactgcaacaaggtacgaagaacaagtcattcgttggtc
actgacttatttgaacagcacatgggagctcatctactacagtctctggatggatttgtg
ttcgtggtcagtcaagaaggcagatttctgtatatctcagagactgtgtccatctacctt
ggcctttcacaggtggagttgactggcagtagcgtgttcgattacatccaccctgcggat
catgtcgagatggcagagcgtcttggcattaggccacacctccgagccgaggcaggctgt
cagacgtcccatgagagtgcttcaagctccgcctccgcttcctcactggctggcactcca
gaaccagctccatccagcccctgttctccagttagagagttttcagaacgtggcttcttc
atccggatgaaatccaccctcaccaagcgtggcctccatgttaaatcctcaggctataaa
gtgattcatgtgacaggtcggattcggtgtcggccagccctggtgccaggctccgcccgc
cccttgcatcggccaatgggattggttgccctggcgcacacgcttccgccctccacgctg
aatgaggtgcgcatggaaagcaacatgtttgtcttccgcgtcaacatggacctgcagatc
agctactgcgagaacaggatttcagagtatatggacctgagcccagctgaggtggttggc
caaacctgctacaactttatccatgcggaagacctggacaccatcagactgagccatgaa
gacttgctgcggaaagggcaggttgtgacggggtattatcggtggctgcagaagagagga
gggtatctgtggattcagtcctgtgccaccgtgtccattaaccacaaagcgccccatgag
cgtaacgtcatctgggtcaactatgttctcagtcgaacagagctggcagacatgcctctg
gacttatcacaactcccagaaagcctgagggcagaacggcttcaagcgagctcctcccca
cgtgacacctctccaaaggcacaaggctccacggcgacacagccattgaaaggcagggcc
gagacagaccacaaagggaaggaacccttttcgcacactgctgccagccaatcggagaac
accaggaagagatcgcaccagtctgaccctgaaagtggtccacccgaggtaaggaggcgg
attgaagtgtttcgtcagagagaagacagcccgtgtacctcctcggaccaagccagcgac
agcgaggtggaagaggacgatgagagagtgagcgagtgggaccacaacccctccagcaaa
cgggtgaagagcgaagacaacaaacaaggcaatggggccaacggagcaggaaagatccac
aacggccgcgctgtgatccagcatcttaagagcgtggtgaccagttctgggtccaatatt
aagactgaacaagaagtgataggaacaactcttggtgcaggttctgggaggcgctggagc
caacctcagcacagtggtgtaggaaccaatggcagcagtccaccttcccaacctccaaca
gaagctccacccaagggtctgttcaaccccccgtccccgactctgtctccacccatctta
gcctcgtccctgccgagagatgaacggtccatccacggggggcgcgctccagacttcgag
ctcctgcagagactgactgcgagtggggctgcgggacgtgtgctctttcaccccctggct
cttggcccacaggggcctcagagtctctacgctcccagcaccatccgctacgccccacct
gagatgcccacagctcacgctgacgggcaccactcggaccacgtggtcaaaactcccgct
ttctttccacacctgcagaggatcgcgtctctgcctccttttagcggcttttctccagcc
gaacccacctttcctccatctctgcccttctgtatgaacggactgaggggggcggcaggg
acagatgaggattga
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