Pimephales promelas (fathead minnow): 120478774
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Entry
120478774 CDS
T08155
Symbol
vps53
Name
(RefSeq) vacuolar protein sorting-associated protein 53 homolog isoform X1
KO
K20299
vacuolar protein sorting-associated protein 53
Organism
pprm
Pimephales promelas (fathead minnow)
Brite
KEGG Orthology (KO) [BR:
pprm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pprm04131
]
120478774 (vps53)
Membrane trafficking [BR:
pprm04131
]
Protein recycling
Others
EARP complex
120478774 (vps53)
Endosome - Golgi transport
Tethering complex
GARP complex
120478774 (vps53)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Vps53_N
VPS53_C
Vps54_N
COG4_N
FBF1
GrpE
Laminin_II
Sec8_N
hAT-like_RNase-H
COG3_N
O_Spanin_T7
FUSC
Med11
ING
VPS51_Exo84_N
Motif
Other DBs
NCBI-GeneID:
120478774
NCBI-ProteinID:
XP_039526825
LinkDB
All DBs
Position
Unknown
AA seq
832 aa
AA seq
DB search
MMEDEELEFVEDLEAILHLTPEVQLAIEQVFPSQDPLDRADFNAVEYINTLFPTEQSLAN
IDDVVNNIRLKIRRLDDNIRTVVRGQTNVGQDGRQALEEAQKAIQQLFGKIKDIKDKAEK
SEQMVKEITRDIKQLDHAKRHLTTSITTLNHLHMLAGGVDSLEAMTRKRQYGEVANLLQG
VVNVLEHFQKYMGIPQIRQLSERVKAAQSELGTQILADFEETFPAQGSKKSGGPSIVLRD
ACLVANVLDPRIKQEIIKKFIRQHLSEYLVLFQENQDVAWLDKIDRRYAWIKRQLVDYEE
KYGRMFPEEWWMTERIAVEFCQITRIELAKLMRTRAREIEVKLLLFAIQRTTNFEGLLAK
RFSGCTLNDGPGQKKPETPLEPTNPFLEDESGEDNVSEKEEDLDRPKKPKAPDNPFHGIV
SKCFEPHLYVYIESQDKNLGELIDRFVADFRAQGPPKSGTDEGGAVLPSCADLFVYYKKC
MVQCSQLSTGEPMIALSTIFQKYLREYAWKILSGNLPKTSTNSGGLTISSLLKEKEGSEA
AKFTMEELCLICSILSTAEYCLATTQQLEEKLKEKVDKSLMERINLTGEMDTFSTVISNS
IQLLVQDLDAACDPALTAMSKMPWQSVEHVGDQSPYVTSVIMHIKQNVPIIRDNLASTRK
YFTQFCIKFTNSFIPKFINHLFRCKPISMVGAEQLLLDTHSLKTVLLDLPSIGSQVVRKA
PASYTKIVVKGMTRAEMILKVVMAPHEPSVVFVDNYIKLLADSNPETFQKILDMKGLKRS
EQSTMLELFRQRLPTPPSGPDGGPSLSFSAPTPEQESSRIRKLEKLIKKRIQ
NT seq
2499 nt
NT seq
+upstream
nt +downstream
nt
atgatggaggatgaagaattagagtttgtggaagatttggaggcgatattacaccttact
ccagaagtgcagctggccattgagcaggttttccccagccaagaccctttggatcgagct
gacttcaatgctgttgaatacattaataccttgtttccaacagagcagtcattggcgaac
atagacgatgtggtgaataacatccgacttaaaatcagacggttggacgacaacatcagg
acagtggtgaggggacagactaatgtgggacaagatggcagacaggcattggaggaggcc
cagaaagccatccagcaactctttggcaaaatcaaagacatcaaagacaaagcggagaaa
tcggagcaaatggtgaaagagatcacacgggacatcaagcagttggaccatgcaaagcgt
cacctgacgacttctataaccaccctcaatcacctgcacatgctggctggcggtgtggac
tctcttgaagctatgactcgaaagaggcagtatggggaggtggccaatctccttcagggt
gtagtcaacgtgcttgagcacttccagaagtacatgggcatcccccagatacgccagctc
tcagagagagttaaagccgcacagagcgagcttggtacacagatattggctgacttcgag
gagacttttcctgcccaggggtcaaagaaatctggtggtcctagcattgttctcagagat
gcctgcttggtggcgaatgtcctggatcctcggattaagcaggagatcatcaaaaagttc
atcaggcagcacctgtcagaatacctagttctcttccaagagaaccaggatgtggcatgg
ctcgacaaaatagaccgtcgttatgcgtggatcaagcgtcagctcgtggactatgaagag
aagtatggacgaatgttccctgaggagtggtggatgaccgagcgcattgctgtagagttc
tgtcagatcaccagaatcgagctagccaagctgatgcgaacccgtgccagggagatcgag
gtcaagcttttgctcttcgctattcaaaggaccaccaatttcgagggactgctggctaag
cgcttctcggggtgcaccttgaacgacgggcccgggcagaaaaaacctgagacgcctcta
gagccaacaaacccctttctggaagacgagtcaggagaggacaacgtatcagaaaaggag
gaagatctggatagaccaaagaagcccaaggctccagacaaccccttccacggcattgtg
tccaagtgctttgagcctcatctctacgtttacatcgagtcgcaggataaaaatctcgga
gagctgatcgaccgctttgttgctgattttcgggcacagggtccccctaaatcaggtaca
gatgagggaggtgctgtgcttcccagctgtgcagatctcttcgtgtactacaagaagtgt
atggtgcagtgctcgcaactgagcaccggagaacccatgattgctctgagcaccatcttc
cagaagtatctgcgcgagtatgcctggaagatcctctctggaaacctacccaagaccagc
accaatagtggtggtctgaccatcagcagcctgctgaaggagaaagagggatcagaagcg
gccaagttcaccatggaagagctttgtctcatttgcagcatcctaagcacagccgaatac
tgcctggctaccacacagcagctggaggagaagctcaaggaaaaggtggacaagtcattg
atggagagaatcaacttaactggggagatggacacctttagcacggttatctcaaacagt
atccagcttttggtgcaggacctggatgctgcatgtgatccagcccttacagctatgagc
aagatgccatggcagagtgtggaacatgtgggagaccaaagcccgtacgtgacctctgta
atcatgcacatcaaacaaaatgtgcccatcattagagacaacctggcctccacccggaaa
tacttcacgcagttctgcattaagttcaccaactccttcattccaaagttcatcaaccac
ctattcaggtgtaaaccaatcagcatggttggagcagaacagctactcctggacacgcat
tccctcaagaccgttcttctagacctcccttccattggctctcaggtggtccgtaaagcc
ccggccagctacaccaaaatagtggttaaaggaatgactcgagcggagatgatcctcaag
gtggtcatggcccctcacgaaccatctgtggtctttgtggacaactacatcaagctcctt
gctgacagcaaccctgagactttccagaagatactagatatgaagggtctgaaacggagt
gagcagagcaccatgctggagcttttcagacagaggttgcccactccgccctcaggacca
gacggtggcccatcattgtccttcagtgcccccacccctgaacaagagtcttcccgtatc
cgcaaactggaaaagctcattaaaaagagaattcagtaa
DBGET
integrated database retrieval system
