Pimephales promelas (fathead minnow): 120478845
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Entry
120478845 CDS
T08155
Symbol
sars2
Name
(RefSeq) serine--tRNA ligase, mitochondrial
KO
K01875
seryl-tRNA synthetase [EC:
6.1.1.11
]
Organism
pprm
Pimephales promelas (fathead minnow)
Pathway
pprm00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
pprm00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
120478845 (sars2)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
pprm01007
]
120478845 (sars2)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pprm03016
]
120478845 (sars2)
Enzymes [BR:
pprm01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.11 serine---tRNA ligase
120478845 (sars2)
Amino acid related enzymes [BR:
pprm01007
]
Aminoacyl-tRNA synthetase
Class II (C/G)
120478845 (sars2)
Transfer RNA biogenesis [BR:
pprm03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
120478845 (sars2)
Prokaryotic type
120478845 (sars2)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
tRNA-synt_2b
Seryl_tRNA_N
DUF2031
Map3k7cl
Motif
Other DBs
NCBI-GeneID:
120478845
NCBI-ProteinID:
XP_039526937
LinkDB
All DBs
Position
Unknown
AA seq
513 aa
AA seq
DB search
MASSVRAATRCCSFYLLTSSRLNVSSGFRWSYRPCSSRPVRSSLYEHVREGYSHKPELDM
QRVCEETDAVTAEVENRKGDLRAADVKVIVSVWKKLQKVQKEISDLEKRKLVISGKVRAL
VDEHDKSTLSSLEEYNSAREEGRALREKLSQLYLQESELEKEHYCRALRLPNRTHPSVPI
GDESQARVVELVGQRREFDFKPKGHLEIGEGLDIIRQRRLAHVSGHRSYYLRGAGARLQF
ALQNFTMDLLQKLGFIPMVVPDMLKSVVFEGCGMQPHAHKSQVYSLDPSRFSDLNLAGTG
EVGVAGYFMDHAVNLKDLPVRTVCSSTCYRAETDTGRETWGLYRVHHFNKIEMFGVTSNE
TGEESSQLLDEFVMLQKEIFSSLKLHYRVLDMPTQELGPPAFRKYDIEAWMPGRGSFGEI
SSASNCTDYQSRRLNILYEGNDGNPKYAHTVNATACAIPRTIIAILETHQTKEGTVQIPE
VLQHYLGLDVIEKPKYTPIKYMGPNQPKRHTSK
NT seq
1542 nt
NT seq
+upstream
nt +downstream
nt
atggcgtcctctgtaagggcagctacacggtgttgctctttttatctgctcacgtcttcg
agactaaatgtcagcagtggatttagatggtcctaccgaccttgctcctctcgaccggtc
aggagcagcctctatgagcatgtacgggaagggtacagtcacaaacccgagctggacatg
cagcgtgtgtgcgaagagacagatgcggtgacagcggaggtggaaaatcggaaaggagat
ctgcgggcagctgatgtcaaagttatagtctcagtctggaagaaactacagaaggtgcaa
aaagaaatatcagatttggaaaagagaaagcttgtgatcagtggcaaagtccgcgctctt
gtagatgaacatgacaaatccactttgtctagtcttgaagagtacaacagtgcgagagaa
gaaggcagagcactcagggagaaacttagtcagttgtatctgcaagagagtgagctggag
aaagaacattactgccgtgctctacgactgcccaacagaacacatccaagtgtgcccatc
ggagatgagagccaggcaagagtggttgaattggttggtcagagacgagaatttgatttc
aaaccaaaaggccacctggaaattggagagggtcttgacatcataagacagagacgtctt
gcccatgtgtcagggcacagatcatactacttgagaggggcaggggccagacttcagttt
gccttgcaaaattttactatggatcttcttcagaaattgggctttattcccatggttgtt
cctgacatgttgaaatcagtggtttttgaaggttgtgggatgcagcctcatgctcataaa
tcacaggtgtactctctggatccatcacgcttttctgaccttaatcttgctggaacaggg
gaagtaggagtggcaggatatttcatggatcatgctgtaaatttgaaggatttacctgtc
aggaccgtctgtagtagcacatgttatcgagcagaaacggatactggaagagagacctgg
gggctctacagagttcaccattttaacaagattgaaatgttcggtgtgacttcgaatgag
acgggagaggagagttcccaattgctggatgaatttgtcatgttacagaaggagattttc
tcttccctaaagcttcattacagagtcttggatatgcccactcaagaattggggcctccg
gccttccgaaagtatgatattgaggcatggatgccaggacgtggcagctttggagagatc
tccagtgcctcaaactgcacagactaccagagccgacgtcttaacattctctatgaggga
aatgatggaaaccctaagtatgcgcacacagtaaatgctacagcttgtgctattccacgt
accatcattgccattttggagacacaccaaaccaaggaagggacggttcagattcctgaa
gtcttgcagcattatcttggcttggatgtgatagaaaaacctaaatacactcctattaaa
tatatgggaccaaaccaacccaagcgacatacctcaaaataa
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