Pimephales promelas (fathead minnow): 120478952
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Entry
120478952 CDS
T08155
Symbol
trpc2a
Name
(RefSeq) short transient receptor potential channel 2
KO
K04965
transient receptor potential cation channel subfamily C member 2
Organism
pprm
Pimephales promelas (fathead minnow)
Brite
KEGG Orthology (KO) [BR:
pprm00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
pprm04040
]
120478952 (trpc2a)
Ion channels [BR:
pprm04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
120478952 (trpc2a)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ion_trans
TRP_2
PKD_channel
Ank_2
Ank
Ank_3
Motif
Other DBs
NCBI-GeneID:
120478952
NCBI-ProteinID:
XP_039527089
LinkDB
All DBs
Position
Unknown
AA seq
852 aa
AA seq
DB search
MENLTQDNWREIVNKKLHFPPELIPAIQEGNMASVDSLLSLGDGIIRQLEESEDRLWREA
LNLSIRLGAEDIMTSLLLGVKFDFRQIHEALLVAVDTNQPRFVKHLLDRLDQEKGNKMDV
RSFSMAIFDHSIDDSQFAPGVTPLTLACQKDLYEIVSMLTQRGHDIPMPHSISCACLECR
NGRQYDLLKFSLSRINTYRGIASRAYLSITSEDAMLSAFHHSRELRKLSKKEPEFKPQYL
ALEQLCQEFAVELLGMCRNQSEVSTILNSAEGDSEDEELGLDEQTFEEGIPNLARLRQAV
NYNQKQFVTHPICQQVLSSIWCGSLSGWRGSRTAWKLLVSLTIFITMPVLCLVYWIAPKS
KLGKLLKVPVIKFLLHSSSYMWFLITLLTESIFMEIYRGDYASRKQDILYTSLHMIWVAG
FFWFECKEVWLEGLKSYFLDLWNILDMMVLSMYLASFTLRILIMLKGHFLCQDSSTQELC
DYFTNTVREDWKQEDPQLIAETLFAVTSMLSFTRLAYILPAHESLGTLQISMGRMIDDMM
RFMFILMIIGTAFLCGINNVYVPYVASAHLGRFNDTFNFLFWTMFGMANQEYVDMHEYAL
AEFVGRIFYGVFTLLIVIVLLNMLIAMISNSFQRIEDDADVEWKFARSKLYLSYFREGLT
MPVPFNIIPSPKALFYVLRSIFQKICCCCKKKAPEYPPITSLSSNTLNNSGQGEGRVPYR
LQVTKALVHRYIEAARREFEESKRKDVGNRITELNKVVGRLHSEMKDFHQKLQWRRKSQP
DQANILGKYIMGARNNFRDFDNNEAMGCQNTGVHMSMQHTEEEDEEEKKGEIVSEEGEEA
VPGEESASTPDV
NT seq
2559 nt
NT seq
+upstream
nt +downstream
nt
atggaaaaccttacgcaagacaattggcgggagattgtgaacaaaaagcttcactttcca
ccagagctgatccctgctatccaagagggcaacatggcctcggtggacagtctcctctcc
cttggcgatgggatcatccgtcaactggaagagtctgaggatcggttatggagggaagcg
ttgaacctctccatccgactgggcgccgaagacatcatgacttcccttcttttgggagtc
aagtttgacttccgtcagattcatgaagctctactggtggctgtcgacaccaaccagcca
cgattcgtcaaacacctcctggaccgcctggatcaagaaaaaggcaataagatggacgtt
cgttcctttagcatggccatcttcgaccactccatcgacgattctcagttcgcaccggga
gtgacgccactaacgctggcctgtcagaaggacctgtatgagatcgtatctatgctgacc
cagagaggtcatgatattcccatgcctcactcaatctcgtgcgcgtgcttggagtgccgt
aacggacgacaatacgacttgctcaagttctcgctgtcccgtataaatacgtacagaggc
attgccagccgcgcatatttgtcgatcacctcggaagacgccatgctcagcgctttccac
cacagccgagaactacgcaaactgtctaagaaagaaccagaatttaagcctcagtacctg
gctttggaacagctgtgtcaggagtttgctgtggagcttttgggaatgtgccggaaccag
agtgaggtctccaccatcctcaacagtgctgagggggacagcgaggatgaagaactaggc
ctagatgaacagacatttgaggaaggcatccccaacctcgctcgtcttcgccaggccgta
aactacaatcaaaaacagtttgtgactcatcccatctgccagcaagtgctctcctccatt
tggtgcgggagcctgtccggttggaggggaagtcgaactgcttggaaactgctggtgtct
ttaaccattttcattaccatgccggttctatgccttgtctactggatcgccccaaagtcc
aagctgggtaaattgctgaaggttcctgtgattaagttcctgttacactcttcatcatac
atgtggttcctcatcactcttttgacggagtctattttcatggagatctaccgtggcgat
tacgcctcccggaagcaggacattctctatacctctcttcacatgatatgggttgcaggt
ttcttctggtttgagtgtaaggaagtttggctcgagggtttgaagagttacttcttggat
ttatggaacattctggatatgatggtgctgagcatgtatctggcgtccttcacactgcgc
attctcatcatgctaaagggacatttcctctgtcaggactccagcacacaagagctgtgt
gactatttcaccaacacagtacgagaggactggaaacaggaggatcctcagctgatcgca
gagactctctttgccgtgaccagcatgttgagtttcacacgtctcgcctacattctgccg
gcccatgaatccctgggaaccctgcagatatccatgggaagaatgatcgatgacatgatg
aggttcatgttcatcctcatgattataggaacagcatttttgtgcggaataaacaacgta
tacgtcccatatgttgcttctgcacatcttggcagatttaatgacacatttaacttcctc
ttctggaccatgtttggaatggcaaaccaagaatatgtagacatgcatgagtacgctctg
gctgagtttgtaggaaggatcttctacggggtattcacgctgctcatcgtaatagtgctc
ctgaacatgcttattgccatgatctcaaactcatttcagaggattgaggatgatgcagat
gtcgagtggaagtttgctcggtctaaactctacctcagctactttagggagggtctaact
atgccagttccctttaatatcatcccatctccaaaggctctcttttatgtcttaagaagc
atcttccaaaagatttgctgctgctgtaagaagaaagccccagaatatcctcccatcaca
tctttgtctagcaataccctgaataacagcggtcaaggtgagggcagagtgccataccgc
ctgcaggtcaccaaggctctagtgcaccgctatattgaagccgcacgcagagagtttgaa
gagagcaagcgtaaagatgtggggaacagaatcaccgagctgaataaagttgtgggccgg
ctgcacagcgagatgaaggacttccaccagaagctgcagtggcgacgcaaaagccagccg
gaccaggccaacattctgggcaaatacatcatgggggcgagaaacaatttccgtgacttt
gataacaatgaggccatggggtgtcaaaatacaggtgtgcacatgagtatgcagcacaca
gaagaagaggatgaggaggagaagaaaggagagatcgtctcagaggagggggaggaggcc
gtcccgggagaagaaagtgctagcactcctgatgtatga
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