Pimephales promelas (fathead minnow): 120478977
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Entry
120478977 CDS
T08155
Symbol
zgc:114130
Name
(RefSeq) mRNA decay activator protein ZFP36L1
KO
K18753
butyrate response factor
Organism
pprm
Pimephales promelas (fathead minnow)
Pathway
pprm04218
Cellular senescence
Brite
KEGG Orthology (KO) [BR:
pprm00001
]
09140 Cellular Processes
09143 Cell growth and death
04218 Cellular senescence
120478977 (zgc:114130)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pprm03019
]
120478977 (zgc:114130)
Messenger RNA biogenesis [BR:
pprm03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
120478977 (zgc:114130)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-CCCH
zf_CCCH_4
Torus
zf-CCCH_2
zf-CCCH_4
zf-CCCH_9
zf-CCCH_UNK-like_4th
Zn_finger_prot
Motif
Other DBs
NCBI-GeneID:
120478977
NCBI-ProteinID:
XP_039527144
LinkDB
All DBs
Position
Unknown
AA seq
416 aa
AA seq
DB search
MKTTRELRGITEESSNKVLVRTMPSYALNQFIDLDDVLCKHLLNLDLREPMKTSAQAAAV
GYRKPDSPCTLSSTGSGLSIDSIESGSMNTNYWGTQKVSSQSKWGKMPFWAERSVSMVEG
NTGSLGWSSAEPSHLKQSSVASGAVSLSNSTSSITATSSRYKTELCRTFAERGLCKYGSK
CQFAHGPDELRDLNRHPKYKTEPCRTFHSIGFCPYGIRCHFVHNAEDDFAQSRAQTSNPT
VQRPPLLRQSFSFAGFPTAPQPLEAPSSFLRAPSASTPSSAMSDLLSLAFPDIDPNTLLD
QARELHPQFLPSPDSGYSHSGLTPTLSPTQLASSQPEGCLRQSPTGGASLGLRSLSHTSL
SDHEGGSCSSSSSMSGSESSFGPEANGRRLPIFSQLSVPDDAVYNEHSNSSASFFL
NT seq
1251 nt
NT seq
+upstream
nt +downstream
nt
atgaaaactacgagggagttgcgggggatcacggaggaatcatcaaataaagtcttggtc
aggactatgccatcctacgcgctcaatcagtttattgacctggatgacgtcctgtgcaag
caccttttaaatcttgatcttcgagagccgatgaagacctccgcacaggcagctgctgtg
ggatataggaagcctgacagtccctgcacactttcctccactggttcaggactttctatt
gacagcattgagagtggaagcatgaacacaaattactggggcacccagaaagtatcatct
cagtcaaaatggggtaagatgcccttctgggcggagcgctccgttagcatggtggagggg
aacactggaagtcttggttggtcttctgccgaacccagccatttaaagcaatcttcagtc
gcgtcaggtgccgtttccctctccaactctacgtcttcgatcacagccacctcgtcacgc
tacaagaccgagttgtgccgcacgttcgccgaaaggggtttgtgtaaatacggcagcaag
tgtcagttcgcgcacggccccgacgaactgcgagacctcaaccgtcacccgaaatataag
acggagccctgccgcactttccactcaattggtttctgcccctacggtatccgctgccat
ttcgttcacaacgccgaagacgatttcgcacaatcccgagcccagacctccaacccgact
gtccaacggcctcccctactcaggcagagcttcagcttcgccgggtttcccacagctccc
caacctctcgaagctccttcctcgttcctgcgcgcgccttccgcttcgactccgtcaagc
gccatgtctgaccttctctcgttggccttccccgatatagaccccaacacccttctggac
caggctcgagagttgcaccctcagtttcttccctctcccgactccgggtactcgcactcg
ggactgacgcccacgttgtcacccacccagctcgcttcctcccagcccgaaggctgctta
cggcagagtcctaccggtggagcttccctaggcctccggagtctatcccacacctctctc
tcagaccacgaagggggcagctgcagctcctccagcagcatgagcgggtccgaatcctca
ttcggcccggaagccaacgggcgcaggcttcccatcttcagccagctttcagttccggat
gacgccgtctacaacgaacacagcaactcgagcgcaagcttcttcctgtag
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