Pimephales promelas (fathead minnow): 120479005
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Entry
120479005 CDS
T08155
Symbol
srsf1a
Name
(RefSeq) serine/arginine-rich splicing factor 1A
KO
K12890
serine/arginine-rich splicing factor 1
Organism
pprm
Pimephales promelas (fathead minnow)
Pathway
pprm03040
Spliceosome
pprm05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
pprm00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
120479005 (srsf1a)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
120479005 (srsf1a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pprm03041
]
120479005 (srsf1a)
Spliceosome [BR:
pprm03041
]
Common components
Common spliceosomal components
SR proteins
120479005 (srsf1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RRM_occluded
RRM_3
RRM_7
Nup35_RRM_2
CoV_nucleocap
PRP38_assoc
Motif
Other DBs
NCBI-GeneID:
120479005
NCBI-ProteinID:
XP_039527200
LinkDB
All DBs
Position
Unknown
AA seq
260 aa
AA seq
DB search
MSGGGVIRGPAGSNDCRIYVGNLPPDIRTKDVEDVFYKYGAIRDIDLKNRRGGPPFAFVE
FEDPRDAEDAVYARDGYDYDGYRLRVEFPRSGRGMGRGGFGGGGGGGGGGGGGGGGGGAP
RGRYGPPSRRSEYRVIVSGLPPSGSWQDLKDHMREAGDVCYADVFRDGTGVVEFVRKEDM
TYAVRKLDNTKFRSHEGETAYIRVKVDGPRSPSYGRSRSRSRSRSRSRSRSNNRSRSYSP
RRSRGSPQYSPRHSRSRSRS
NT seq
783 nt
NT seq
+upstream
nt +downstream
nt
atgtctggtggtggtgtgatccgcggccctgctgggagtaacgattgccgcatctatgtg
gggaatctgccccctgatatccgcaccaaagatgtcgaagatgtcttttataagtacgga
gccattcgggatatcgatttgaaaaaccgacgtggcggaccgccattcgcttttgtcgag
tttgaagaccccagagatgctgaagatgctgtttatgctcgtgatggctatgactacgat
ggttatcgtcttcgagtggagtttccgagaagcgggaggggtatggggagaggtggtttt
ggcggaggtggcggcggcggcggaggtggtggtggtggcggcggcggcggtggggctcct
aggggtagatatggacccccctccagacgttcagagtacagagttatcgtttcagggctt
ccaccgagtggtagctggcaggatttgaaggatcacatgcgtgaagcaggtgatgtatgt
tacgctgacgttttccgagatggaactggtgtggtggagtttgttcgcaaagaagacatg
acctacgccgttcgcaaactggataacacaaaattccggtcgcatgagggagaaactgcg
tatatccgcgtgaaggtggacggtccccgcagtccgagctatggaagatcaaggtcaagg
agccgcagtcgcagcaggagccgcagccgcagcaacaaccgtagccgaagctactcccca
cgccgcagccgaggatccccgcagtactcccctcgccatagccgttcccgctctcgctcc
taa
DBGET
integrated database retrieval system
