Pimephales promelas (fathead minnow): 120479053
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Entry
120479053 CDS
T08155
Symbol
smc1al
Name
(RefSeq) structural maintenance of chromosomes 1A, like
KO
K06636
structural maintenance of chromosome 1
Organism
pprm
Pimephales promelas (fathead minnow)
Pathway
pprm04110
Cell cycle
pprm04114
Oocyte meiosis
Brite
KEGG Orthology (KO) [BR:
pprm00001
]
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
120479053 (smc1al)
04114 Oocyte meiosis
120479053 (smc1al)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pprm03036
]
120479053 (smc1al)
Chromosome and associated proteins [BR:
pprm03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Cohesin complex
120479053 (smc1al)
Meiosis-specific proteins
Cohesin complex and associated proteins
120479053 (smc1al)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SMC_N
SMC_hinge
AAA_23
AAA_21
AAA_15
AAA_29
ABC_tran
SlyX
Motif
Other DBs
NCBI-GeneID:
120479053
NCBI-ProteinID:
XP_039527261
LinkDB
All DBs
Position
Unknown
AA seq
1233 aa
AA seq
DB search
MGYLKLIEIENFKSYKGRQIIGPFHKFTAIIGPNGSGKSNLMDAISFVLAEKTSNLRVKT
LKDLIHGAPVGKPAANRAFVSMVYQQDSGQDLTFSRIIIGSSSEYRINSKVVPLAEYSEE
LEKLGILIKARNFLVFQGAVESIAMKNPKERTALFEEISRSGELAQEYDRLKKEMVKAEE
DTQFNYHRKKNIAAERKEAKQEKEEAERYQRLKDEVVRAHVQLQLFKLYHRESEIEKLNR
ELAHRNKEIDKDRKRMDRVEDELKDKKKELGRMMRDQQTIEKEIKEKDADLNQKRPLYIK
AKENTAHKIKKLEAARKSLQNAQKCYKKRKADMDELDREQGSVEMARQEFEERMEEEAQS
QGQDLQLEENQVKAYHRLKEEASKRAATLAQELEKFNRDQKADQDRLDLEERKKIETEAK
IKQKIREIEENQKRIEKLEDYITTSRQSLDEQKRMEEELTEEVEQAKRRIDEINMELNQV
MEQLGDARIDRQENSRQQRKAEILESIKRLYPGSVYGRLIDLCQPTQKKFQIAVTKVLGK
NMDAIIVDSEKTGRDCIQYIKEQRGEPETFLPLDYLEVKPTDEKLRELRGAKLVIDVIRY
EPPHIKKALQYACGNALVCENVEDARRIAFGGPYRHKTVALDGTLFQKSGVISGGASDLK
AKARRWDEKAVDKLKDRKEKLTDELKEQMKAKRKEAELRQVQSQAHGLQMRLKYSQSDLE
QTKTRHLSLNMQEKSKLESELANFSPRINDIKRIVQSRERDMKDLKDRMNLVEDEVFLDF
CKEIGVRNIREFEEEKVKRQNEIAKKRLEFETQKTRLAIQLDYEKNQLKEDQEKVVMWEQ
TVKKDESEIERLKKEEQRNMKIIDETMAQLQDLKNQHLAKKSEVNDKNHEMEEIRKKLGG
ANKELTQLQKEVTAIETKLEQKRSDRHNLLQACKMQDIRLPLRSGTMDDISQEEGSSQAE
ESLSSSQKASSTVLAKEALIEIDFSSLSEDLKDSLSEEELKAEMNTLQQRLNEQQSILQR
ISAPNMKAMEKLESVRDKFQETSDEFEAARKRAKKAKQAFEQIKKERFDRFNACFESVAT
NIDEIYKSLSRNSSAQAFLGPENPEEPYLDGINYNCVAPGKRFRPMDNLSGGEKTVAALA
LLFAIHSYKPAPFFVLDEIDAALDNTNIGKVANYIKDQSVQNFQAIVISLKEEFYTKADS
LIGVYPEQGDCVISKVLTFDLSQYPDANPNPNE
NT seq
3702 nt
NT seq
+upstream
nt +downstream
nt
atgggctacctaaagttaatagagatcgaaaactttaagtcctacaaaggcagacagata
atcgggcctttccacaagtttacagcgattattgggccgaatggatcaggtaaatccaat
ctcatggatgccatcagctttgtcctggcagagaagaccagtaacctgcgtgtgaaaacg
ctgaaggatttgattcatggcgctccggtgggcaaacctgcggccaatcgggcgtttgtg
agcatggtgtaccagcaggacagcggccaggacctgaccttctccaggatcatcatcggc
tcctcgtcggagtaccgcatcaacagtaaagtggtgccgctggcggagtacagcgaggag
ctggagaaactggggatcctcatcaaggccagaaacttcctggtgtttcagggtgcggtg
gagtccatcgccatgaagaaccctaaagagagaaccgctctgttcgaggagatctctcgc
tccggagagctggcgcaggagtacgacaggctcaagaaggagatggtgaaggccgaggag
gacacgcagttcaactaccaccggaagaagaacatcgccgccgagcggaaggaggccaag
caggagaaggaagaggcggagcggtaccagcggctgaaggacgaggtggtgcgcgcgcat
gtgcagttacagctcttcaagctgtaccacagagagtccgagatcgagaagctgaaccga
gagctcgcccaccgcaacaaagagatcgacaaggacaggaagcgcatggaccgcgtggag
gacgagctgaaagacaagaagaaggagctgggccgcatgatgagagaccagcagaccatt
gagaaggagatcaaggagaaggatgcagacctcaatcagaagaggcctctgtacattaaa
gccaaggagaacacggctcacaagataaagaagctggaggcggctcgcaagtctctgcag
aacgcccagaaatgctacaagaagcgcaaggccgacatggacgagctggaccgggagcag
gggtcagtggagatggcccgacaggagtttgaggagcgcatggaggaggaggcccagagc
cagggccaagatctgcagctggaggagaaccaggtgaaggcataccaccgcctgaaggag
gaggcgagtaagcgagccgccacactggctcaagagctggagaagttcaaccgagaccag
aaagctgaccaggaccgcctggacctggaggagaggaagaaaatcgagacggaggccaag
atcaagcagaagatccgagagatcgaggagaaccagaagcgcattgagaagctggaggac
tacatcaccaccagcagacagtctctggacgagcagaagaggatggaggaggagctgacc
gaagaggtggagcaggccaagcggaggatcgatgagatcaacatggagctcaaccaggtg
atggagcagctgggtgacgctcgaatcgacagacaggagaacagcaggcagcagcgcaag
gctgagatcctggagagcatcaagaggctgtatcctggatcagtgtacggcagactgatc
gacctgtgccagcccacacagaagaagttccagatcgcggtcaccaaagtgctgggcaaa
aacatggatgccatcatcgtggactctgagaagacgggtcgtgactgcatccagtacata
aaagagcagcgtggcgaacccgagaccttcctgcccctggactacctggaggtcaagccc
acggatgagaagctgcgggagctgcgtggtgccaaactggtgatcgatgtcatccgatac
gagccgccacacattaagaaagccctgcagtacgcctgcggaaacgccctggtctgtgag
aacgtggaggacgctcgcaggatcgcgtttgggggaccatacagacacaagactgtggct
ctagacgggacgttattccagaagtctggagtgatctccgggggtgccagtgacctgaag
gccaaggctcggcgctgggatgagaaggccgtggataaactgaaagacaggaaggagaaa
ctcacagatgagcttaaagagcaaatgaaggccaagaggaaggaggccgagctgcggcag
gttcagtctcaagctcacgggctgcagatgagactcaagtactctcagagtgatctggag
caaaccaagaccagacacctgtccctcaacatgcaggaaaaatcgaagctggagagtgaa
cttgctaacttcagtccacgcatcaatgacatcaagagaatcgtccagtcacgagagaga
gatatgaaggacttgaaggaccgcatgaacttggtggaggacgaggtgtttctggacttc
tgcaaagagatcggcgttcgtaacattcgtgagttcgaagaagagaaggtcaaaaggcaa
aatgagatcgcaaaaaaacgcctggagtttgagactcaaaagacccgcctggcgatccag
ctggactatgagaagaaccagctgaaggaggaccaggagaaggtggtcatgtgggaacag
acggtcaagaaagacgagagcgagatcgagaggctcaagaaggaagagcagaggaatatg
aagatcattgatgaaaccatggcacagctgcaggatctgaagaaccagcacttggccaag
aaatctgaggttaatgataaaaaccatgagatggaggagatccgcaagaaactggggggt
gcaaacaaggagttgacgcagctgcagaaggaggtgacggccatcgagaccaagctggag
cagaagcgcagcgacagacacaacctcctgcaggcctgtaagatgcaggacatccggctc
ccgctgcgctccggcaccatggatgacatcagccaggaggagggcagttctcaggccgag
gagagtctcagcagcagtcagaaggcgtctagcactgtcctggctaaagaagcgctcatt
gagatcgacttcagcagcttgtcagaagacctaaaggactctctgtcggaggaggagctg
aaggcggagatgaacacgctacagcagagactcaacgagcagcagagcatcctgcagagg
atcagcgcccccaacatgaaggccatggagaagctggagagcgtccgggacaagttccag
gagaccagtgacgagtttgaagctgccaggaagagggcgaagaaggccaagcaggcgttt
gagcagataaagaaggagaggtttgaccgcttcaatgcctgctttgagtctgtggccacc
aacatcgatgagatctataaatctctgtcccgcaacagcagtgcccaggcttttctgggg
cctgagaaccccgaggagccatacctggatgggatcaactataactgtgtggccccaggc
aagcgtttccggcccatggacaacctgtctggcggagagaagaccgtggctgctctcgct
ctgctgttcgccattcacagctataagcccgctcccttcttcgtgctggacgagatcgat
gccgcactcgacaacaccaacatcggcaaggtcgccaactacatcaaggaccagtcggtg
cagaacttccaggccatcgtgatctccctgaaagaggagttttacaccaaggcagactcc
ctgatcggagtgtatccagagcaaggagactgcgtcatcagtaaagtcctgacctttgac
ctctcccagtatcctgacgccaatcccaatcccaatgagtga
DBGET
integrated database retrieval system
