Pimephales promelas (fathead minnow): 120479165
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Entry
120479165 CDS
T08155
Symbol
mid1
Name
(RefSeq) E3 ubiquitin-protein ligase Midline-1
KO
K08285
midline 1 [EC:
2.3.2.27
]
Organism
pprm
Pimephales promelas (fathead minnow)
Pathway
pprm04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
pprm00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
120479165 (mid1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pprm04121
]
120479165 (mid1)
Enzymes [BR:
pprm01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
120479165 (mid1)
Ubiquitin system [BR:
pprm04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
120479165 (mid1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
COS
SPRY
zf-B_box
ANCHR-like_BBOX
RING_XB3-XBAT31
fn3
zf-RING_UBOX
zf-C3HC4_4
zf-C3HC4
zf-C3HC4_2
zf-RING_2
zf-C3HC4_3
TRIM_CC
Pur_ac_phosph_N
zf-RING_5
FN3_DSCAM-DSCAML_C
PRY
U-box
Motif
Other DBs
NCBI-GeneID:
120479165
NCBI-ProteinID:
XP_039527374
LinkDB
All DBs
Position
Unknown
AA seq
658 aa
AA seq
DB search
MDTLESELTCPICLELFEDPLLLPCAHSLCFNCAHRILVSHRSSSDESKPVSAFQCPTCR
YAIALDPQGLDGLKRNVTLQNIIERFQKASLSGPNSPSETRRTSMSSPVQCQFCETDPPQ
EALKTCVTCEVSYCQECLRATHPNKKPFTGHRLTDPVPDARVRGLACAEHAEEKVNMYCV
TDEQLICSLCKLVGHHREHQVAALGERFDKLKQMLDSNLSNLIKRNSELENLMAKLIQTC
QHVEHNAAHQESKLTEECDTLINIVQQRRQIIGTKIKEGKVVRVRRLAQQIANCKQFVER
SSSLIAQADQALKETDHARFLQTAKSISERVSMATASSQVLIPEINLNDSFDAFALDFSR
EKKMLEGLDYLTAPNAPTIREELCTASHDTITVHWTSEDEFSVVSYELQYTISTGQANVV
SLCNSLDSWMIAPNIKQNHYTVHGLQSGTRYIFIVKAMNQAGSRSSAPGKLKTNSQPFKL
DPKSAHRKLKVSHDSLTVERDEASSMKSHAQDRFGSGNYGVTGNVFIDSGRHYWEVLIGG
STWFAIGVAYKSAPKHGWVGKDSTSWVLSRCNTSWAVRHNSKEFPIEPSPHMRRLGVLLD
YDSGSLAFYDAAGTQHLHTFDISFSQPICPVFSVWNKCLTVLTGLPIPDHLETGDLHD
NT seq
1977 nt
NT seq
+upstream
nt +downstream
nt
atggacacactggagtcggagttgacttgcccaatctgtctggagctgttcgaggatcct
cttcttctgccctgcgcccacagcctgtgctttaactgtgctcaccggatcctggtgtcc
caccgaagctcatccgacgagtccaaacccgtctccgctttccagtgtcccacctgccgg
tatgccatcgccctcgacccgcagggcctagacgggctcaagcgcaacgtgactctgcag
aacatcatcgagcgcttccagaaggcctcgctgagcggcccgaactccccgagcgagacc
cggcgcacgagcatgagttccccggtccagtgccagttctgcgagaccgacccgccccag
gaggcgctgaagacctgcgtgacctgtgaggtctcgtactgccaggagtgcctgcgggcc
acgcaccctaacaagaagccgttcacgggtcaccggctgacggatccggtgccggacgct
cgggtccgaggactggcctgtgccgaacatgcggaggagaaggtcaacatgtactgtgtg
acggatgagcagctgatctgctctctgtgtaaactggtcgggcatcaccgagagcaccag
gtggcggcgctgggggagcgcttcgacaagctgaagcaaatgttggattccaacctcagc
aatttgatcaagaggaacagcgagctggaaaacctcatggcgaagttgatccagacgtgt
caacatgtggagcacaacgcggctcatcaggagagcaaactgacggaagagtgcgacacg
ctgataaacatcgttcagcagaggagacaaatcatcggcaccaaaataaaagaaggaaaa
gtggttcgtgtgagaaggctagctcaacagatcgctaactgtaagcagtttgtggagaga
tcgtcctcgctcatcgctcaagcggatcaagctctgaaagagacggaccacgctcgattc
ctgcagactgcaaagagcatctcagagagagtctcaatggcaaccgcgtcctcacaggtc
ctgattccagagatcaacctgaacgactcgttcgacgcgttcgcactggacttttccaga
gagaagaagatgctggaaggtctggattacctcacagctccgaacgctcccaccatccgc
gaggagctgtgcacggcctctcacgacaccatcacagtccactggacatcagaggacgag
ttcagtgtggtgtcatacgagctccagtacaccatctccaccggccaggctaacgtcgtc
agtctgtgtaactcgctggacagctggatgatcgcgcccaacattaagcagaaccactac
accgtccacggcctgcagagcggcacccgctacatcttcatcgtgaaggccatgaaccag
gccggcagtcgcagcagcgcgccggggaaactcaagaccaacagccagccgttcaagctc
gacccgaagtcggcccaccgcaagctgaaggtttcccacgacagcctgacggtggagcgc
gacgaagcctcgtccatgaagagccacgcccaggaccgcttcggctccgggaactacggc
gtcaccgggaacgtgttcatcgacagcggacgccactactgggaggtcctgatcgggggg
agcacgtggtttgcgattggcgtggcttataaatcggctcccaaacacggctgggtgggg
aaggactcgacgtcgtgggtcttgagccgctgcaacacctcgtgggccgtgcgtcacaac
agcaaagagttccccatcgagccgtctcctcacatgcggcgcctgggggttctgctggac
tacgactccgggtcgctggcgttctacgacgccgcgggaacacaacacctccacaccttc
gacatctccttctctcagcccatctgccccgtcttcagcgtgtggaacaagtgcttgacc
gtcctgaccgggctgcccattcccgaccacctggagaccggcgacctgcacgactga
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