Pimephales promelas (fathead minnow): 120479206
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Entry
120479206 CDS
T08155
Symbol
syne3
Name
(RefSeq) nesprin-3 isoform X1
KO
K21761
nesprin-3
Organism
pprm
Pimephales promelas (fathead minnow)
Pathway
pprm04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
pprm00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
120479206 (syne3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pprm03036
]
120479206 (syne3)
Chromosome and associated proteins [BR:
pprm03036
]
Eukaryotic type
Centrosome formation proteins
LINC complex
120479206 (syne3)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Spectrin_SYNE1_2
KASH
SYNE3
Spectrin
SR_desmoplakin_3
L544_helical
PI_PP_I
Motif
Other DBs
NCBI-GeneID:
120479206
NCBI-ProteinID:
XP_039527426
LinkDB
All DBs
Position
Unknown
AA seq
1111 aa
AA seq
DB search
MTQQEQHEFKECLEEALSWMQAIQERLKQNDNTQGPRSALEVRLRETEKIHSSEPDGHVK
MDRVLVASEALLRNGDEEMKNQTHSKLKDLKALWEETLTYIIHCHSRIEWVWLHWSEYLK
AHEEFGMWLEKMHRALEPLLEMQLGLQEKLWQVDHLQVLHSDIQGQALFLERLLDEAATL
FNRTEDPSVNVQAQQGLQNAYNHIRDRAQERLALAKKVVEEHQQYQSDYHKFQTWLMSKT
EEVSRFSDMEDTPQNRLKALQELNASIAQEELTLQDIERLSEVVKANTSPAGAEKITKEM
EELRLAWQRLRQILIEIQEELQSSLDSETEYSNRCKELWADLGQIRSLVQNLSSELESRD
GERTEEHLVAQWKAHTRVRNKLIAEEPRVEQLKSRLKELFRFPQDSKNLSDEVLAVVKEY
QSVKGRSFRLSSESETALQQILQDPLYGFSQWSQVVSQVLEASAEVTEFSHIALLVQNIE
KLLKNSVQLQERLSLLQVKSDLLSSVFGQEKAVDLLEELSGDMRKRELLHSQLQQRKNRL
QGLISKTKDFSDAYESIHKKLTFIKERFVKTGELQPDILAKKSQADQLRVIRKDLEDCKA
HIIALETLVSSNPANRTKFERLYAHWNVLYNEVRMKVNESEKSIAEHESLHENILNLEKW
LMIMRQKLESFRGSDGEWSIDNRQHEAERALGEFPEKEFQLNQTEAEGHTVLAKTSEKGK
VHIVQDLKRLRESWTSLHTLSLNLYRLLNGHAATGDHDSLSQKTEFLLDRRADGDHQDTS
SGFEVGIDTGDKGLEWHMHRSESTDHPEPERNIVISEGIVRPERSEVGRRERSYRDQSMD
DEIDAVMPASDRLVNRKQIVVKDSYEDDLLRSGGRTGEWVEEHTGSSGIKDLDMQGKYSF
SYDAQRVVQLSQIPPDETSAAYQMGSQGPQRHADLEAQRREFEAWLHKENEKLTGILNNQ
RSLSPKELRIRQNTLKGLRAGVAWGQSQFTKLMSGQQSKSAEVDTELEELRYCWMLYKSK
LQEAGDLKGLLKHKGVSGQQQELVRAGKTNSGLGFLYRVCRVALPLQLLLLALLLLAFLL
PMMDEGTSCSLSNNFARSFNIMLRYDGPPPT
NT seq
3336 nt
NT seq
+upstream
nt +downstream
nt
atgacccagcaagagcagcatgaattcaaggaatgtttggaggaagccctgtcctggatg
caggccatccaggagaggcttaaacaaaatgataacacccaagggcccagatcagcgctg
gaggtcaggctcagagagacagagaaaatccatagctcagagcctgatggccatgtgaag
atggacagggtgcttgtggcttctgaagctctgcttcgaaatggagatgaagaaatgaag
aatcagactcattcgaaactcaaagatctgaaagcgctctgggaggagacgttaacctac
atcattcactgtcacagtcgtatcgagtgggtgtggctgcactggagtgaatacctaaag
gcccatgaggagtttgggatgtggctggagaagatgcacagggctctggagcctctgctt
gagatgcagctgggtctccaggagaagctgtggcaggtggatcatctgcaggtccttcac
agtgacatccaaggccaggcactgtttctggagaggctcctggatgaggctgcaacgctg
ttcaaccggaccgaggaccccagtgtaaatgtgcaggctcagcaaggtcttcaaaatgcc
tacaaccatattcgagaccgagcacaggaaaggttggcattggcaaagaaagtagtggag
gagcaccagcaataccaaagtgactatcataaattccaaacctggctgatgtctaaaaca
gaagaagtcagccgtttcagtgacatggaggatacgccacagaacaggctaaaagccctg
caggagctgaatgctagtatagcccaagaagaactcactctccaggacattgaaaggttg
tctgaggtggtgaaggccaacacgtctccagcaggtgcggagaagatcacaaaagagatg
gaggagttaaggctggcctggcagaggttacgccaaatccttatagagattcaagaagag
ctccagagctcactggactctgagaccgagtattcaaaccgctgtaaggagctctgggcg
gacctggggcagatcagatccctggtccagaacctcagcagtgagctggagagcagggat
ggagagaggactgaggaacacttggtagctcaatggaaggcgcacacgagggtgcgcaac
aagctcatcgcagaggagcccagggtggaacagctaaaatcccggttgaaagagctattc
cgattcccacaagattctaaaaacctgtctgatgaggtgctagctgtggtaaaagaatac
cagagtgtgaaaggcagatctttcaggctgtcctctgaaagcgagactgctctccagcag
atactgcaggaccctctgtatggcttcagtcagtggagtcaggtggtttctcaggtactg
gaggcttccgccgaggtgacggagttctcccacatcgctctgctcgtgcagaatatagag
aagttacttaaaaacagcgtgcaactccaggagcgcttgagtttgctccaggtgaagagt
gatctgctcagctctgtttttggccaagagaaagctgttgatctgttggaagagctcagc
ggggatatgaggaagagagagttactccacagccagctccaacagcgcaagaaccgcctg
cagggtttgatatcaaagacgaaggacttttcagatgcctatgaatccatccataaaaaa
ctgaccttcataaaggaacggtttgtcaagacgggtgaacttcaacctgacattctagcc
aagaagagccaggccgatcaactccgggtcattagaaaggacttggaagattgtaaagcc
catatcatagctctggagacgctggtgtcatccaaccctgcaaacaggacaaagtttgag
cgtctgtatgcccactggaatgtgctttataatgaagttcggatgaaggtgaatgaaagt
gagaagagcattgcagaacatgagagtttacatgaaaatattctgaatttggagaagtgg
ttgatgatcatgagacagaagctggagtcgtttcgtggatcagatggggaatggagcatc
gataaccgccagcatgaggctgagagggcgcttggagagtttccagagaaggaatttcag
cttaatcagacggaagctgaaggtcacaccgttctggccaaaacctcggagaaaggcaaa
gttcacatcgttcaggaccttaaacgccttcgagagtcctggacgtccctccacacgctt
agtctcaatctttacaggcttctaaatggacatgctgccacaggcgaccatgactcccta
tcacagaaaacagagttcctgctggacagaagggcagacggggatcaccaggacacttct
tcaggctttgaagtgggaattgacactggtgacaaaggactggaatggcacatgcacaga
tctgaatcaacagatcacccagagccggagaggaacattgtcatctctgagggcattgta
agacctgaacgttcagaggtcgggagaagagagaggagttaccgagaccaatccatggat
gatgagatagatgcagtcatgcctgcaagtgaccgtcttgtgaacagaaagcagatagtg
gtaaaagactcttacgaagatgacttgcttaggagcggtggtcggactggtgaatgggtt
gaggaacacacaggcagttctgggattaaagacctggatatgcaaggcaaatatagcttt
tcctatgatgcacagagagtggtgcagctgtcacagatcccacctgatgagaccagtgct
gcttatcagatgggctctcaggggccccagcgtcatgctgatctggaggcccagaggagg
gagtttgaagcgtggcttcacaaggaaaatgaaaaactcacaggaattctgaacaaccaa
agatccctgagccctaaagaactgaggataagacagaatacactcaagggtttacgtgct
ggtgtagcctggggtcagagtcagttcacaaaactgatgtctggtcagcagagtaagtca
gcggaggtggacacagagctagaagagctgcgttattgctggatgttatacaaatccaaa
cttcaagaggctggtgacctcaaaggtctgctcaaacacaagggtgtcagtgggcaacaa
caggagcttgtccgagctggaaagacgaacagcggtctgggattcttgtaccgtgtgtgt
cgtgtggctcttcctctccagctcctgctgttggctcttctgctgctggccttcctgctg
cccatgatggacgagggcactagctgttcactgtccaacaacttcgcccgctccttcaac
atcatgctccgctacgacggacctccgcccacttaa
DBGET
integrated database retrieval system
