Pimephales promelas (fathead minnow): 120479297
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Entry
120479297 CDS
T08155
Symbol
lingo2b
Name
(RefSeq) leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein 2b
KO
K23533
leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein
Organism
pprm
Pimephales promelas (fathead minnow)
Brite
KEGG Orthology (KO) [BR:
pprm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pprm04131
]
120479297 (lingo2b)
Membrane trafficking [BR:
pprm04131
]
Endocytosis
Lipid raft mediated endocytosis
RhoA-dependent endocytosis
120479297 (lingo2b)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_1
I-set
Ig_3
ig
LRR_5
Ig_2
LRR_RPS2
V-set
LRRNT
LRR_LRWD1
LRR_9
C2-set_2
Ig_C17orf99
Ig_6
Motif
Other DBs
NCBI-GeneID:
120479297
NCBI-ProteinID:
XP_039527532
LinkDB
All DBs
Position
Unknown
AA seq
607 aa
AA seq
DB search
MLFSPFSCALGLSLLPLLLFQCSVHACPARCECSVPTRSVSCHRRRLVQVPEGIPIETRA
LDLSKNRLRIVTPQNFSSLLLLEELDLSNNLLSSVEPASFRTQPRLRSLRLRSNQLTLLP
RGALAGLSELTLLDVSQNRLVILLDYGFEEQRRLRVLELSDNELVFIAPRAFSGLASLRS
LTLQHCNLSTVPTHALAHLHGLNTLRLRDLGIAELQAHAFKGLPRLKHLEVDRWPFLEGF
PTSTLQGLNLSTLSITHTNLTSVPVVSHLSYLTHLNLSYSRIRVLPAGWLRGMDRLEVVR
VRQANLLSVEAQAFQGASSLRILDLCYNRLTTLERSVFPASVALQSLLIGQNPLVCDCRL
RWLLEKTPPLLYGDVQPECSAPAPLAGKLLRDLVEPQISRYVICTKPRVISMATYPSQAE
EGQRAWLYCSADGAPPPSVSWLTPHRRHITTKSTGRVVVHTNGSLEFRMAEPQDSGMYVC
VASNPAGNATLSVMHAVKSSGIRDRALYANRSFLFDPDYNNSLINGTEEYTIRVVLDITT
ILVSTAMGCLSFLGVVLFCFLLLFAWSRGKGKHRGSVDIQYVPRKRKGANSELTETSGPR
RVNMKMI
NT seq
1824 nt
NT seq
+upstream
nt +downstream
nt
atgctgttctctccgttctcttgtgctctggggctctccctcctgcctctcctcctgttt
cagtgctccgtccatgcctgccctgcccgctgcgagtgctcggtgcccacgcgatctgtg
tcatgccatcgcagacggttagtgcaggtgcccgagggcatccctatagaaacaagggca
ttggacctcagtaaaaaccggctgcgaattgtgacgccacagaacttctcctcgctgcta
ctgctagaggagctggatctcagcaacaacctgttgtcatctgtggaaccggccagcttt
cgcactcagccgcggctacgctctctccggctgcgcagcaatcagctgaccctgctgccg
cgcggggcgctagctggcctcagcgagctcactctgctggatgtcagtcaaaaccgtctt
gttattctgctggactacggctttgaagagcagcggaggctgcgggtgctagagctgagt
gataatgagctagtgtttatcgccccacgggcgttcagtggcctggcgtccctgcgctct
ctgacgctgcagcactgcaacctgagcacagtgcccacacatgctctcgcacatctgcat
ggccttaacaccctgcggttgcgggacttgggcatcgcagagcttcaggcacacgccttt
aagggtctgccgcgactgaaacacctggaagtggaccgctggccttttttggaggggttt
ccgacctccactttgcaggggctgaacctcagcacactgtccattacccacaccaacttg
acgtctgtgccagttgtgtcacatctgtcgtatctaacacacctcaacctgtcttacagc
cgtatacgggtcctgccggcagggtggctgcggggaatggaccgcctggaagttgtacgt
gtgcgacaggccaacctgctcagtgtggaagctcaagcctttcaaggagcctcctcgctg
cgtattcttgacctttgttacaaccgtctcaccacactcgagaggagcgttttccctgct
tccgtagccctgcagagtcttctgattggtcagaacccattagtgtgtgactgtcgtcta
cgctggctcctggagaagactccacctttgctgtacggggatgttcaacctgaatgcagt
gctcctgcccccttggctgggaagctacttagggacctggtagaacctcaaatctctcgt
tatgttatctgcaccaaacccagggtcatctccatggcaacctacccgtcacaggcagaa
gaagggcagagagcttggctgtattgcagtgcggatggggctccacctccctctgtgtca
tggctgacaccgcacaggcggcacattaccacaaagagtacgggaagagtggtggtccac
accaatggctcactagagttccgcatggcagagcctcaggatagcggcatgtatgtgtgt
gtggcatcgaacccggcgggcaatgctactctgtcagtaatgcacgcggttaaaagctcg
ggaatcagggacagagccctttatgccaaccgaagctttctctttgacccggactacaac
aactccttgattaatggcacggaggagtacaccatcagagtagtgctggatatcaccacc
atcctggtctccactgcaatgggctgcctcagcttcctgggcgtcgttttgttctgcttc
ttgttgttgtttgcatggagccgtggcaaagggaagcacagaggaagcgtggacattcaa
tatgtcccacgaaagaggaaaggtgcaaactcagaacttacagaaacaagcgggcccaga
cgagtcaacatgaagatgatctga
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