Pimephales promelas (fathead minnow): 120479398
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Entry
120479398 CDS
T08155
Symbol
syf2
Name
(RefSeq) pre-mRNA-splicing factor syf2
KO
K12868
pre-mRNA-splicing factor SYF2
Organism
pprm
Pimephales promelas (fathead minnow)
Pathway
pprm03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pprm00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
120479398 (syf2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pprm03041
]
120479398 (syf2)
Spliceosome [BR:
pprm03041
]
Complex B
Other components
Prp19-related factors
120479398 (syf2)
Complex C
120479398 (syf2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SYF2
AAR2_1st
Motif
Other DBs
NCBI-GeneID:
120479398
NCBI-ProteinID:
XP_039527725
LinkDB
All DBs
Position
Unknown
AA seq
238 aa
AA seq
DB search
MATGAEVVAPSNEEESAETPAALKREDRLRKFRELHFKRNEARKLNHQEVVEEDKRLKLP
SNWEAKKARLEYELAVDQKKKECAERGEDYNRVKLLEISAEDAERWERKKKKKNPDPGFS
GYAEAQLRQYQRLTRQIKPDMDNYEKQREECGEDFHPTSNSLIHGTHVPSKESIDRMVDD
VEKQIEKRAKYSRRRAYNDDADIDYINERNAKFNKKAERFYGKYTAEIKQNLERGTAV
NT seq
717 nt
NT seq
+upstream
nt +downstream
nt
atggccactggcgcagaggttgttgctcccagcaatgaagaggaatccgcagagactcca
gcagcgctgaagagggaagatagactcagaaagttcagagagcttcatttcaagaggaat
gaggcccgtaagctgaatcatcaggaggtggtggaggaagacaagagactgaagctgccc
tcaaactgggaggccaagaaagctcgtctagagtatgaactcgcagtggaccaaaagaag
aaggagtgtgcggagcgtggcgaggactacaaccgtgtgaagctcctggagatcagcgct
gaagatgcagagagatgggagagaaagaaaaagaagaaaaaccctgatccagggttctcc
gggtacgccgaggcccagttgagacagtaccagagactgacgaggcagatcaagccagat
atggacaactatgagaaacagagagaggagtgtggagaagatttccaccccacctccaac
agtctgattcacggcactcacgttccctctaaagagagcatcgaccgcatggtggacgac
gtggagaaacagattgaaaagcgtgcgaaatacagtcgccgcagggcctacaacgacgat
gcggacatcgattacatcaacgagaggaacgccaagttcaacaagaaggctgaacgtttc
tacgggaaatacaccgcggagatcaaacagaacctggagagaggaacggccgtgtag
DBGET
integrated database retrieval system