Pimephales promelas (fathead minnow): 120479401
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Entry
120479401 CDS
T08155
Symbol
capn1a
Name
(RefSeq) calpain 1, (mu/I) large subunit a isoform X1
KO
K01367
calpain-1 [EC:
3.4.22.52
]
Organism
pprm
Pimephales promelas (fathead minnow)
Pathway
pprm04141
Protein processing in endoplasmic reticulum
pprm04210
Apoptosis
pprm04217
Necroptosis
pprm04218
Cellular senescence
pprm04382
Cornified envelope formation
Brite
KEGG Orthology (KO) [BR:
pprm00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
120479401 (capn1a)
09140 Cellular Processes
09143 Cell growth and death
04210 Apoptosis
120479401 (capn1a)
04217 Necroptosis
120479401 (capn1a)
04218 Cellular senescence
120479401 (capn1a)
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
120479401 (capn1a)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
pprm01002
]
120479401 (capn1a)
Enzymes [BR:
pprm01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.22 Cysteine endopeptidases
3.4.22.52 calpain-1
120479401 (capn1a)
Peptidases and inhibitors [BR:
pprm01002
]
Cysteine peptidases
Family C2: calpain family
120479401 (capn1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Peptidase_C2
Calpain_III
EF-hand_6
EF-hand_1
EF-hand_8
EF-hand_7
CAPN13-like_C_EFh
Motif
Other DBs
NCBI-GeneID:
120479401
NCBI-ProteinID:
XP_039527728
LinkDB
All DBs
Position
Unknown
AA seq
705 aa
AA seq
DB search
MFTYGGISAQISANRLKADGVGSFEQALHFQNQDFEALKQECLEGGYLFEDPCFPAEPPS
LGFKELAPHSSKTQDVEWMRPTELCDDPQFIVGGASRTDICQGALGDCWLLAAIGSLTLN
EKLLHRVVPLGQSFQDDYAGIFHFQFWQFGEWVDVVIDDRLPVKDGELMFVHSAEGNEFW
SALVEKAYAKLNGSYEALSGGSTTEGFEDFTGGVSEMYELRKAPRDLYRIISKALERGSL
LGCSIDITSAFDMEAVTFKKLVKGHAYSVTALKQVEYRGRTERLIRIRNPWGQVEWTGAW
SDNSPEWDEIDPSEKDDLHLQMEDGEFWMSFSEFLRQFSRLEICNLSPDALSDEDLSHWN
TIKFHGAWRRGSTAGGCRNHPNTFWINPQYKITLLEEDDDPEDEEVACSLLVALMQKDRR
RHRHHGQDMHTIGFALYEIPEEYAGCQNVHLKKDFFLTNSSSARSETFINLREVSTRLRL
PPGEYIIVPSTFEPSKEADFVLRVFTEKQSETEELDDDISADLEDEAEITEDDIDDSFKS
MFQQLAGEDMEISVRELKTILNRVVSRHKDLKTDGFSMESCRTMVNLLDKDGSARLGLVE
FQILWNKIRKLLGIFREFDIDKSGTMNSYEMRIAVESAGFKLNNRLNQILVARYAENDVI
DFDNFVCCLIKLECMFRTFQQLDKDGTGTADMNLSEVLWFDFLII
NT seq
2118 nt
NT seq
+upstream
nt +downstream
nt
atgttcacatatggagggatctcagcacagatcagtgctaacaggctaaaggcggatggc
gtgggctcttttgagcaggccttacacttccagaaccaggattttgaggccctcaaacag
gaatgtttggaagggggctacctgtttgaagacccctgctttccagccgaaccgccctcg
ctcggcttcaaagaactcgctccacattcctccaaaacccaagatgtggagtggatgcgc
cctacggagctctgtgatgatcctcagttcattgtgggaggagcttcgcggaccgacatc
tgtcagggagctctgggtgactgctggctcctcgctgctataggttctctgactctgaat
gaaaaactcctccacagggtcgtacctctaggccagagctttcaggatgactatgctgga
attttccactttcagttctggcagtttggcgagtgggtcgacgttgtgattgacgatcga
ctcccggtcaaagacggggagctcatgtttgtccattcagcagagggaaatgagttctgg
agtgccttggttgaaaaggcctatgcaaagctaaatggctcctatgaagctctctctgga
ggctccaccactgagggatttgaggatttcaccggaggggtctcagagatgtacgagctc
cggaaagctccgagagacctgtaccgaatcatcagcaaagccctggagagaggctccctg
ctgggctgctctattgatatcaccagtgcctttgacatggaagcggtgacgtttaagaag
ctggttaagggccacgcttactcagtgactgctctcaaacaggtggaatataggggccgt
acggagaggcttatccgtatccgtaacccgtggggtcaggtagaatggacgggggcctgg
agtgacaactctcctgaatgggacgagatcgatccatctgaaaaggatgacttgcactta
cagatggaggatggcgagttctggatgtcattcagcgagtttttgcggcagttctccagg
ctggagatttgtaatctgtcccctgatgctttgagtgatgaggacctgagccactggaac
accatcaagtttcacggtgcctggcggagaggaagtaccgcaggaggctgccgaaatcat
cccaacacattttggatcaatccacagtataagatcacgctgctggaggaagatgatgac
ccggaggatgaagaagtggcctgcagcttactggtggctttaatgcagaaagaccgcaga
cggcaccgccaccacggccaggacatgcacaccatcggttttgcgctctacgagattcct
gaagagtacgccggctgtcagaatgtgcaccttaaaaaggacttcttcctgacaaactca
tcgagcgcccgctccgagaccttcatcaacctgcgcgaggtgagcacccgtctccgcctc
cctcctggggaatacatcatcgtcccctccaccttcgaacccagcaaagaggctgatttt
gtcctgcgagtcttcacagagaagcagtcagagacagaggagttggatgatgatatttca
gctgacctggaggatgaggcagaaattacagaggatgacattgatgactctttcaagtcc
atgtttcagcagctggctggagaggatatggagatatctgtccgtgaactcaagactatt
ctcaacagagtagtgtccagacacaaggatctgaagacagacggcttcagcatggagtcc
tgcagaacgatggtcaacctcttggataaagatggtagtgcacgtttgggtttagtagag
tttcagatcctctggaacaaaataaggaagttgctggggatcttcagagagtttgatatt
gataagtcagggacaatgaactcttacgagatgcgtatcgctgtagaatcagcaggtttt
aaactcaacaatagactcaaccagatccttgttgccagatacgctgagaatgatgtcatc
gattttgataactttgtttgctgcttgatcaaactcgagtgcatgttcagaacttttcag
cagttggacaaagatggaacaggaacggctgacatgaacttgtctgaggtgctttggttt
gatttcttgattatttaa
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