Pimephales promelas (fathead minnow): 120479412
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Entry
120479412 CDS
T08155
Symbol
gbf1
Name
(RefSeq) Golgi-specific brefeldin A-resistance guanine nucleotide exchange factor 1 isoform X1
KO
K18443
golgi-specific brefeldin A-resistance guanine nucleotide exchange factor 1
Organism
pprm
Pimephales promelas (fathead minnow)
Pathway
pprm04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
pprm00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
120479412 (gbf1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pprm04131
]
120479412 (gbf1)
Membrane trafficking [BR:
pprm04131
]
Endosome - Golgi transport
Arf GTPases and associated proteins
Arf GTPase associated proteins
120479412 (gbf1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sec7
TPR_28
Sec7-like_HUS
CYTL1
DUF1045
DUF758
Motif
Other DBs
NCBI-GeneID:
120479412
NCBI-ProteinID:
XP_039527758
LinkDB
All DBs
Position
Unknown
AA seq
1854 aa
AA seq
DB search
MVDKNIYIVQGEISVVVSAIKRNSRWSTHTPLDEEQDPLLNSFSLLKDTLNNIKDLSDVE
PNVFLRPFLEVIRSEDTTGPITGLALTSVNKFLSYGLIDANHEGAAEGIENMADAVTHAR
FVGTDPASDEVVLMKILQVLRSLLLTPVGAHLTNESVCEIMQSCFRICFEMRLSELLRKS
AEHTLVDMVQLLFSRLPQFKEEAKSYVGTNMKKAYNILWKNKRVQLKMRAGGISESSKWK
KQKRSPRPPRHMVRSPSGQMDPAQSSTLTNNLSGGVPFIEPHSGGSSTLPGSDSAASSIS
SPTTDSGLDGSSKTTSKEDLTDLEQSSSTATTPVESQYEGREVERAQSASVESIPEVLED
RDLLADQSDSASVHDMDYVNPRGVRFTQSTQREGAALIPYGLPCLRELFRFLISLTNPHD
RHNSDVMMHMGLQLLNVALEAAHIAPYQSLLCLVKDELCRHLIQLLGVDRMNLYAASIRV
CFLLFESMREHLKFQLEMYLKKLMDIITLENPKMPYEMKEMALEAVVQIWRIPSFVTELY
INYDCDFYSSNLFEDLTKLLSKNAFPVSGQLYTTHLLSLEALLTVIDSTEAHCQAKVLNS
ASQLDQSESSTVEGDSSVNTITDSTIEPGKSVPGSNGQNTVVSETRTACPPTSGHLMAEK
MRFGRQDQEETDTAEKKILKKPQRFSSGLPNSQELLEIKNKKKLLITGTEQFNQKPKKGI
QILQEKGLLSSPMDNNEVAQWLRDNPRLDKKMIGEFISDRRNTDLLDSFVNTFGFQGLRI
DEALRLYLEAFRLPGEAPVIHRLLETFTDNWHKVNGNPFLTNDAGFALAYAVIMLNTDQH
NHNVRKQNIPMTLEQFKKNLKGVNGGNDFDQDMLEDIYNAIKNEEIVMPDEQTGLVKENY
VWSVLLHRGASSEGIFLHVPDSSYDRDLFTMTWGPTIAALSYVFDKSLDDTIIQKAITGF
RKCAMISAHYGFSDVFDNLIISLCKFTTLSSESVENLPTVFGSNRKAQVAAKTVFSLAHN
HGDILREGWKNIMDSMLQLFRAELLPKSMVEVEDFLDPNEKISLQREETPSNRGESAVLS
FVSWLTLSEQSGLRGPSTENQEAKQAALLCIKHCDPEKLITESKFLQLESLQELMKALIS
VTPDEETYDEEDAAFCLEMLLRIILENRDRVSCVWQTVRDHLYQLCVHANESCFLVERSV
VGLLRLAIRLLRREDIGSQVLLSLRLLLMMKPHVLSRVSREVAYGLHELLKTNAANIHCT
DDWYTLFSLLECIGAGVKPPAAMQVTSTNPDTDTGAQSDSELSSYHQSEVSLDRGYTSDS
EVYTEHGKSRIPRSATDVDVGWLVVGKDDLDGSKATVIPTSKPLTNPLINQYSLTLGQDV
GLHDTKSLIKCVDSLSFIVRDAAHVTPENFELCVKAIRVFVEASLNGGYRTHEKKKSHKY
DSKSSRLRKKPREKDGASRRAKPSSQRLARSHSDDEEDEGVPASYHTVSFQVSLDLLDLM
HTLHTRAAGIYSSWAEEQRHLEDAGRKIEADSQTLWSSCWCPLLQGMAWLCCDARRQVRM
QALTYLQRALLVHDLQTLDAVEWESCFNKVLFPLLTKLLDNISPADVGGMEETRMRACTL
LSKVFLQHLSPLLSLPTFAALWLTILDFMDKYMHAGSSDLLLEAIPESLKNMLLVMDTAG
IFHSADSRTGYSDLWEITWERIDCFLPRLKEELFKQAVIPEPVCNVPVEAVPQPVAVTPA
SPPVPVPSPVPVAPAEPNIPSRPSSPRDMQTPSANGDRTDRSSPVPPSTPPMPTPTKMSP
SVSPPPLGQSPLILQPLASPLQVGVPPMSLPIILNPALIEATSPVPLLPRPTAD
NT seq
5565 nt
NT seq
+upstream
nt +downstream
nt
atggtggacaagaatatatacatcgttcaaggggagatttctgttgttgtgtctgctatc
aagaggaactctagatggagtacccatactccattggatgaagaacaggacccactactc
aacagcttcagcctcttgaaagacaccctcaataacataaaagatctttccgatgtggaa
cccaatgtgtttcttagacctttcctggaggtgatccgctcagaggacacaactggacca
atcacaggtcttgctctcacatcggtcaacaagttcttgtcatatggccttatagatgcc
aatcatgaaggggcggcagagggcatcgagaacatggccgacgccgtcacgcatgcgaga
ttcgtgggcaccgaccctgctagtgacgaggttgtactgatgaaaatcctccaggtttta
aggagtttgctgctaactccagttggagcccatcttaccaatgagtccgtttgtgagatc
atgcagtcctgtttccgaatatgctttgaaatgagattaagtgagctgctgagaaagtca
gctgaacacacgctggtggacatggtgcagctgctcttctccagattgccacagttcaaa
gaggaggccaagagttatgtcggcacaaacatgaagaaggcttacaatatcttatggaaa
aacaaacgagtgcagctgaagatgagagccgggggaataagcgagtcgtccaagtggaag
aaacagaagcgttctccccgcccccctcgtcacatggtgcgcagtccctcaggacagatg
gatccagcccagtccagtaccctcaccaacaacctttcaggtggagttcccttcatagag
ccgcacagtggaggctcttctactcttccaggttcagacagtgcagcttcctccatctcc
agccccaccactgacagtggcttagacggcagctctaaaaccacctcaaaggaagacctc
acagacctggagcagagcagctcaacggccaccactcccgtagaatcacagtatgagggc
agggaagtggagcgtgcccagtcagcctcagtggagtccattcctgaagtcctggaagac
agagacttgctggctgaccagtctgattcggcatcggttcacgacatggactatgtgaac
cccagaggagtgcgcttcacgcagtccacccagagagagggtgctgctttaatcccgtat
ggtctcccgtgtctgagagagctcttccggttcctcatctctctcaccaacccacatgac
cgccataactcggacgtgatgatgcacatgggtctccagttgttgaatgtggcccttgaa
gctgcacacatcgccccctaccagtcgttgctctgtctggtcaaagatgagctctgtaga
cacctcatacagttgttaggtgtagaccgaatgaatctgtatgccgcctccatacgcgtg
tgctttcttctctttgaaagcatgcgagaacatctcaagttccagcttgagatgtacctg
aagaagctaatggacatcatcaccttggagaaccctaaaatgccctatgagatgaaggag
atggccctagaggccgttgtacagatctggagaatccccagctttgtcacagagctctat
ataaattatgactgtgacttttacagctccaacctgttcgaggacctcaccaaactgctc
tctaagaatgcctttccagtctctgggcagctctacactacgcatctcctctcacttgaa
gccctgctgacagtgattgacagcacagaggctcattgtcaggccaaagtgctcaacagt
gcttcacagctggaccaatcagaatcatcaacagtggaaggagacagttcagtcaataca
atcacagattcaacaatagagcctggcaaatctgtaccaggttctaatgggcagaatact
gtggtgtcagagacgaggactgcctgtcctcccaccagcggtcatctgatggcagagaag
atgagatttggcagacaggaccaggaggagacggacacagctgagaagaaaatcttgaag
aagcctcagcgtttctccagcggtcttccaaattctcaggaactcttggagatcaagaac
aaaaagaagcttctgatcacgggtactgaacaatttaatcagaaacccaagaagggcatt
cagatcctacaggagaaaggcctgctcagcagccccatggacaataatgaggtggcccag
tggctgagagacaacccccgcctagacaagaagatgatcggagagtttatcagcgaccgc
aggaacaccgacctgctggacagttttgtcaacacgttcggcttccagggcctgcgcata
gacgaggccctccgcttgtatctagaggcattccgtcttcctggcgaagcgcctgtcatt
catcggctcttagaaaccttcactgacaactggcataaagtgaacggtaatcccttcctg
acaaacgacgctggcttcgccctggcttatgccgtcatcatgctgaacaccgaccagcac
aaccataacgttcgaaagcagaacatccccatgacgttggagcaattcaagaagaatctc
aaaggtgtgaatggaggaaatgactttgatcaagacatgctggaagacatctacaatgcc
atcaagaacgaagagatcgtgatgcccgacgagcagacggggctggtgaaggagaactat
gtgtggagtgttctgctgcacagaggagcctcttctgaagggattttcctgcatgtgcct
gacagcagttacgaccgcgacctattcactatgacctgggggccgactattgcagccctt
tcctacgtttttgacaagagcctggatgacactatcattcagaaggccatcactgggttc
aggaaatgtgccatgatctctgcacactacggcttcagtgacgtctttgataacttaatc
atttcgctctgcaagtttactactctcagctctgagtctgtagagaacctgcccaccgta
tttggcagtaacaggaaggctcaagtcgctgccaagactgtgttcagcctggcccataat
catggtgacattttacgagaaggatggaagaacatcatggactcaatgttgcagctattc
agggctgagcttttacccaagtccatggttgaggttgaagactttctagaccctaatgag
aagatttccttacagcgtgaagagacaccatcaaacaggggtgagtccgccgtattgagt
tttgtgagctggttaacattgagtgaacagtctgggctcagaggcccctccactgagaac
caggaggccaaacaagctgccctgctctgcataaagcactgtgacccagagaagctgatt
acagagagcaagtttctacagttggagtctttacaggagctcatgaaggctctcatctcg
gtgacccctgacgaggaaacgtatgatgaagaagatgctgccttttgtctggaaatgctg
ctacgtattattcttgaaaacagggacagagtatcttgtgtgtggcaaacggtacgggat
cacctgtaccagttatgcgtccatgctaatgagagctgcttcctggttgagagatcagtg
gtgggattgctcagacttgccatacgcttattacgcagagaggacattggctcacaggtt
ctcctctctcttcgcttgctgttgatgatgaagcctcatgtcctgtccagagtcagtcga
gaggtggcatacggcttgcatgagctgcttaaaaccaatgctgcaaacatccactgcact
gatgactggtacacactcttttcccttctggagtgcatcggcgctggggtcaaacctccg
gctgccatgcaggtcaccagcaccaacccagacactgacacaggtgctcagtcagatagt
gaactgagctcatatcatcagagtgaagttagtctcgaccgaggatacacgtctgactct
gaggtttacacagagcacggcaaatccagaatacctcgttcagctaccgatgtggatgtg
ggctggctagtggttggtaaggatgacttggatggatctaaggccacggtgatcccaact
tcaaagcccctgaccaatcctctcattaaccagtatagtttaactctcgggcaggacgtg
ggtctccatgacaccaagtccctcatcaagtgcgtggattcgctgtccttcatcgtccgc
gatgctgcccacgtcactccagaaaactttgagctttgtgttaaagccatacgagtgttt
gtggaggccagccttaatggagggtaccgcacccacgagaagaaaaagagccacaaatac
gactccaaatccagccggctccgaaagaagccacgcgagaaggatggcgcgtcgcggaga
gccaaaccgtccagtcagcggctcgcccgttcccatagcgacgatgaagaagatgagggc
gtgccggccagttaccacacggtgtcttttcaggttagtctggacttgttagacctgatg
catacactgcacactcgagcagccggcatctacagctcttgggcagaggaacagcgccat
ctagaggatgctggcagaaagatcgaggcggactctcaaacactgtggtccagctgctgg
tgtccactccttcaaggtatggcttggttgtgctgtgatgcacgaagacaagtccgcatg
caagctctcacctacctacagagagcacttcttgtacacgatctacaaactctagatgcg
gtggagtgggagtcctgcttcaacaaggtcctgtttcctctgctgacaaaactcctagac
aacatcagtccagctgatgtgggcggcatggaagagaccaggatgagggcctgcacactg
ctttctaaggtgttcctgcagcatctctctcctctgctctctctgcccacatttgctgcc
ctctggctcaccattctagacttcatggacaagtacatgcatgctggctccagcgacctt
ctgctggaggcgatccccgagtctctgaagaacatgctgttggtgatggacacagcaggg
atctttcacagcgcagactctcgcacaggctactctgacctgtgggaaataacctgggaa
agaattgactgtttcctgccccggctgaaggaggagctcttcaaacaggctgtcatccca
gaaccagtgtgtaatgttcccgtggaggccgtcccacagcctgttgctgttactccagcc
tctccccctgtgccagtcccctcaccagtgccagttgcccctgcagagccaaatattccc
agcagaccctcgtcgcctcgggatatgcagacacctagtgccaacggtgatcgaaccgat
agatcatctccagttcctccctcaactcctccgatgcccactccgacaaagatgagtcct
tcagtgtccccgccccctctcggccaatctccactcatcctgcagcccctcgcctctccg
ctgcaggtgggcgttcccccgatgtccctgccaatcattctgaacccggctctcatagag
gctacctcacctgtgcccctgctcccccgccccaccgctgactga
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integrated database retrieval system
