Pimephales promelas (fathead minnow): 120479450 Help Entry 120479450         CDS       T08155                                  Symbol cdh23 Name (RefSeq) cadherin-23   KO K06813   cadherin 23 Organism pprm  Pimephales promelas (fathead minnow) Brite KEGG Orthology (KO) [BR:pprm00001]  09180 Brite Hierarchies   09183 Protein families: signaling and cellular processes    03037 Cilium and associated proteins [BR:pprm03037]     120479450 (cdh23)    04515 Cell adhesion molecules [BR:pprm04515]     120479450 (cdh23) Cilium and associated proteins [BR:pprm03037]  Primary cilia and associated proteins   USH complex and associated proteins    120479450 (cdh23) Cell adhesion molecules [BR:pprm04515]  Cadherins   Major cadherins    120479450 (cdh23) BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  Cadherin Cadherin_FAT4_N Cadherin_CELSR2_9th Cadherin_2 Fibulin_C Cadherin_4 SusE SpaA_4 DUF5484 Motif Other DBs NCBI-GeneID:  120479450 NCBI-ProteinID:  XP_039527831 LinkDB All DBs Position Unknown AA seq 2506 aa AA seqDB search MLEMSWCEGLGGKMTLVKLLLSLLLLQTFSEASNQPPRFQNYFFQSYLLIYENTPVGSSI TQLQAVDPDGEPLIFGVVGEEAMRYFAVQETTGVVWLRQPLDRETKSEMQVEFSVSDSQG VVKDTVNIQIGDVNDNAPTFHNQPYAIQIPENTPVGTSVIMVNATDPDQGVGGSVLFSFQ PPSPFFSIDGARGIVTVTRALDYETTTSYQLTVNATDQDRRRPLSSLSNLAISITDIQDM DPIFTNLPYSTNIMEDAPPGFEVRRIRAMDQDLGRPRGIGYTIMSGNTNSMFALDYISGS LTVSGQLDRENPLYSSGFTITVKATELNEDRTPSSATVMTTFTILLIDKNDNPPRFNSSE YRVLIPELAQVGFALPLYIQVEDKDEGVNSMFQVVLTGNNSEHFSISPTAVQGRADLRVR VAVPLDYETIRSYSFSLYANESLSEHVGFARVFIDLINENDNRPIFSQALYNISLLESTA PGTSLLQIKATDNDIGTFGVVRYYFSDEPDQFSMDVETGWVTLRDRLDYELMRRFTLTIL ARDGGGEETTGRLRINVMDVNDNAPIFQKEAYTGSLMENEQAPQQVVRARATDEDSPPNN ILTYSIIYASQFRSYFSITVVEGYAVITVNRPLDYEQVPAGLIYLTLMARDGGNPSLNST VPITIELFDENDNPPEFSLPSYIVNIPENIVAGATVLFVNATDLDASREFGQASLIYSLQ GSSQFRLNTRSGEITTTALLDREVKSEYILIIRAVDGGVGPQQKIGIATVNITILDINDN APMWRDEPYQANVVEMSPIDTDVITILAVDPDYGDNGTVVYSINPENPFYTINRNTGKIR TSGAVLDRESQNARSAQLMRTIVISATDRGTPPLRSSASTTVYVNLLDLNDNDPAFLNLP FVAEVPEGLPIGSSVFRVQVQDPDEGDNGAVTMALQMGMPRLDFRLNITTGILFSTAVLD REQIGQYYLRIIAYDAGQFPRTSTSTLTITVLDMNDETPTFYPSVYNVSLDENVPRDYVL VRLNCTDNDAGLNAELSYFITGGNQDGKFSVGFRTGVVRTVVGLDRETQGSYRLVIEAID NGPAGGRRTGTATVYVEVLDVNDNRPIFIQNSYETSVLENISRGTSILQVQATDADQGEN GRVLYRILSGNNGQFSMDSLSGLISRGTVALDRETRSSHVLEVEAYNSDQGSMRSSVRVI VYVEDVNDESPVFTQSQYNRLGLRETAGIGTSVVVVRATDPDTGDGGAVAYALVSGSDRK FEVDMSTGLVTTVDYLDYETKTSYLMNVSATDQSAPFHRGYCTVYVTLLNELDEAVAFLS AGYEISLRENIATGTEVVQVKAQSADNLNQLTYRFDPDTSPAALALFKIDSITGRITVTG QLDREQGDSYTLTVVADDGGPKRDSTVKVSITILDENDNSPEFDITSDLSVAIPEDTPIG QRVAVVLARDKDAGRNGLVNFTLIAGNMQDVFKINTANNTYGEVYLNARLDREAVDRYLL KVRATDNGSPPRFTDVSLTVNIMDVNDNPPVMQSPRGYNVSVNENVGGGTAVLRVVATDR DIGPNAMLSYYITGGNQDLTFRIDRMTGEIVTRPSPPDREKQQQYTLTVTVEDDGTPPLS TSTTVWVQIIDENDNAPEFPEEEYVTELREGPNTVGAIIATVTAIDPDEDLNGTIRYAIS RGNLAQTFQINSVTGQIVVFKELDYEISNGHYVLTVTATDQCPIPQFRLTSSTTVLVNVV DVNDNAPIFPSSFEGPFDIPEGQPGPRVWTVRATDADSGSNGKVEYSITAGDLKNEFVIS SVEGELRVRRDVELDRETIAYYNITITAKDLGTPALSAMVTVGIQVLDINDNDPVLLNLP FNTSVSEGAAIYTSIYQVRAQDSDSGRNALLTYSVTAGNTDGAFYINETSGVLQVNRPLD RERVAEYRLTITVKDNPDNPRIARRDSDLLVVAVLDVNDNRPIFTQTSYRGEISENSLNG TTVLILNGPVLAEDRDIGVNAVVRYRLLGARVDLFSIDSLTGLVSVRGGAVLDREAFSVP RVELFLLGEDVGGLNSSVPLTITILDINDNPPVFNPSSFTVHLPENSPTGVVVTQLSASD ADAGSNGWLQYRLDTGAQDRFIVDALSGAVLVGNATLDREERSSYRLVVIATDRGTPSLS GTATLSVVLDDINDSRPRFIRPVQTISVNESTPPGEVVATLTAEDPDLRPRLEYYIISVE AKDDGNNPVDGLQQSFGIDFHTGAVFVRNPLNRELVATFEIIVSVHDNASDVIDMSVSVP NAKLTINVLDVNDNAPRFRPFGVANFSERILEGAVAGTTLLSVTAVDPDKGPNGQIIYQL LHLPRGDYIRLEDPSTGKIVANRTVDYEQVQWLNFTVRAQDYGSPPRFAELPVYLRIVDV NDNNPVFQQPLYQKSIFEDVALGTIIVSVSATDADSGLFSVIEYGLVDGEGRFGITPSTG DIYVLSALDRETKDRYTLTAFARDNPGGSPNNRRENSVQVWMSSKK NT seq 7521 nt NT seq  +upstreamnt  +downstreamnt atgttggagatgtcgtggtgtgaaggtttgggaggcaagatgactttggttaaattgctc ctgtccttattgctgctacaaacgttttctgaagcctctaatcagccacctcgtttccag aattacttcttccagtcgtacctgctcatctatgagaacacaccagtgggttcatccatt acccagctgcaggcggtcgatccggacggtgagccgctgattttcggagtggtcggggaa gaggccatgcggtacttcgctgtgcaggagacgactggggtggtgtggctgagacagccg ctcgacagggagacaaagtcagagatgcaggtggagttctcagtcagtgacagtcaaggg gtcgtcaaggatacagtgaacattcagatcggagacgtaaatgacaatgctccaacattt cacaaccagccgtatgccattcaaattccagagaacactccagtcggaacctcagtgata atggtgaacgcgacggacccggatcaaggcgtgggtggtagtgtactcttctccttccag cctccctctccgttcttctccattgatggggccagaggaatcgttactgtgacgagagcg ctggactatgagacgacaaccagctatcagctcactgttaatgccacggaccaggataga cgccgtccgctctctagtctgtctaatttggcaatttccatcactgatatccaagatatg gaccccatcttcaccaacctcccctacagcaccaatataatggaggacgcaccaccaggt tttgaagtccgtaggattagggcgatggatcaggacttgggtcgaccacgtggaattgga tatacgatcatgtcaggtaacaccaacagcatgtttgctctcgactacatcagcggatct ctgaccgtgagcggccagctggaccgggagaacccgctgtactcatccggattcaccatc acagtgaaggcgacagagctgaatgaggaccgcacgccctcgtctgccaccgtcatgacc accttcaccatcttgctgatcgataaaaatgacaatccacccagattcaacagctctgag tatcgtgtcctgatccccgagctggcgcaggtcggcttcgccctgcctctgtacatacag gtcgaagacaaagatgagggggtgaacagcatgtttcaggtggtcctgactggaaataac tctgagcacttcagcatctctcccaccgcagtgcagggcagagctgacctccgcgtgcga gtggccgtcccgctggactacgaaaccatcaggagctacagcttttctctgtatgccaac gagtctctgtcagagcatgtggggtttgctcgggtcttcatcgacctcatcaatgagaac gacaacaggccgatcttcagccaggctctttataacatcagtttacttgagagcaccgct cctggaacatctctactgcaaataaaggccacggataatgacattggcacgtttggagtg gttcggtattacttcagcgatgagccagaccagttctcaatggatgtggagacgggttgg gtgactctgcgagaccggctggattatgagctcatgaggcgcttcactctaacgatactg gctcgggatggaggaggggaggagactacgggacgtctccgcattaacgtgatggatgta aacgacaatgcgccaatcttccagaaggaggcgtatacaggttcgctcatggagaacgaa caggctccacagcaggtcgtccgggcccgggcgacggacgaggactctcctcccaataac atcctgacctactccatcatctacgcttctcagttcagatcatatttcagcatcactgtg gtggagggctatgcagtcatcacggtgaatcgtcctctggattatgagcaggtccccgct ggattgatctatctgactctgatggccagagacggagggaacccgtccctcaacagcact gttcccatcaccatagagctgtttgacgagaacgacaacccacccgagttcagcctcccg tcttatatcgtcaacataccggagaatatcgttgcaggagctacggtgttgtttgtgaat gccaccgatctggacgcctctcgagagtttggtcaggcctctctcatctattccctgcag ggcagctcacagttcagactcaacacgcgttcaggagagatcaccactactgctcttctg gatcgagaggtgaagtctgagtatattctgatcataagagccgtggatggtggggtgggg ccacagcagaaaatcggcatcgctacggtgaacatcactattctggacataaatgataac gcccccatgtggcgagatgagccgtatcaagcaaacgttgtggagatgagtcccatcgat accgacgtcattactatattagcggtggaccctgattatggtgataatgggacggtggtt tattccataaatccagagaaccccttctacaccatcaaccgcaacactgggaagatccgc accagtggagctgtgctggacagagagagtcaaaacgcccggtccgcacagcttatgagg accatcgttatctctgctaccgaccgtgggactcctccactgcgctcttcagccagcact acggtgtatgtgaacctcctggacctcaatgacaacgaccctgcctttctcaacctccca tttgttgctgaagtaccagaggggcttcctattggatcttctgtgttcagggtgcaggtg caggaccctgatgaaggtgacaatggcgcggtgaccatggctcttcagatggggatgccg cggctggacttcaggctcaacatcaccacaggaatcctgttttccacggcagtgctggac cgcgagcagattggccagtattatctgagaattattgcgtatgacgcaggccagtttcca cgaacgtccacgagcactctcaccatcacagttttggacatgaatgatgagacgccaacc ttctatcccagcgtttataacgtatcgttggatgagaacgtgccccgtgattatgtgctg gtcagactgaactgcacagacaatgacgcgggtcttaacgcagagctcagctattttatc acaggagggaaccaagatggaaagtttagcgtgggcttccggaccggtgtggtacggacc gtggtgggtctggatcgggagactcagggctcgtacaggctggtgattgaagcgattgat aatggtccagcgggaggacggagaacaggcacagctacagtatatgtggaggtgctggac gtcaatgacaacaggcctatatttatccagaacagctatgagaccagcgtcctggagaac atatcaagaggaactagtatattacaggttcaggccacagatgcggatcagggggagaat ggaagagttctgtacaggattctctccggaaacaatggtcagtttagcatggacagtctg tctggactcatcagcagaggaactgtggctttggaccgagagacgcgcagctctcatgtg ctggaggtggaggcctacaacagtgaccagggcagcatgcgcagctctgttagggtgatt gtgtacgtggaggacgtgaatgacgagtctccagtcttcactcagtcgcagtacaatcgt ctggggctcagagagactgctgggattggtacatctgtggtagtggtccgagctacagac cccgacacaggggatgggggagctgtggcatacgctctggtctccggttctgaccgtaag tttgaggtggatatgagtacggggctggtgaccacagtggattacttggactacgagacc aagaccagctatttaatgaacgtctcagccacggatcagtcagcgccgttccaccgtggc tactgcaccgtttacgtcactttactcaatgaactggacgaagccgtagcctttctatca gccggatacgagatatcactgagggagaacatcgccacaggaacggaggtggtccaggtg aaggcgcagtcggctgataacctgaaccagctgacgtaccgcttcgaccccgacacctca cctgctgccctggcgctctttaagatcgacagcatcacgggccgtattactgtgacggga cagttggacagagaacagggggattcatacactctcacggttgtggccgatgatggagga cccaagagagactccactgtgaaggtttcaatcaccattctcgacgagaatgacaacagc ccagagtttgacatcacttcggatctgtcggtggctattccagaggacactcccattggc cagagagtcgcggtcgtgttggcacgggacaaagacgctggaagaaacggattggtcaat ttcaccttgatcgcggggaacatgcaggacgtgtttaagatcaacacagccaataacacg tatggagaggtttacttgaatgcccgtctggaccgtgaggccgtggaccgctacctgcta aaagtgcgggcgacggataatggctcccctccgaggttcacagatgtgtcgctcactgtg aatattatggatgtaaacgataaccctccagtgatgcagagccctcgtggatacaacgtc agcgtcaatgagaatgtagggggtggtacagcggtcctgcgtgtcgtagcgacggatcgt gacatcggacccaacgccatgctgtcgtactacatcaccggtgggaaccaggacctgacc ttcagaatagaccgtatgacgggagagatagtgacccgaccgtcacctcctgacagagaa aaacagcagcagtacacactcaccgtgactgtggaagatgatggcacgccacctttatca acgtccaccaccgtgtgggtgcaaataattgatgaaaatgacaacgcacctgagtttccg gaggaagagtatgtgacggagctcagagaggggccaaacactgtaggagccatcatcgcc acagttacagccatcgaccctgacgaagatctcaacggaaccatccgttatgccatctcc aggggcaacctggcccagaccttccagatcaatagcgtaacgggtcagattgttgtcttt aaggaactggattatgagatcagtaacggtcactatgtgctgacggtcacagccacagac cagtgtcctatacctcagtttagactgacctctagcaccacagtcctggtgaatgtggtc gacgtgaacgataacgcacccatcttcccgagttcattcgaaggtccgtttgatatccca gagggtcagccgggcccacgtgtctggaccgttagagccacggatgccgactctggatcc aatggaaaagtggagtacagcatcactgcaggggacctgaaaaatgagtttgtaatctct tcagttgagggagagttgagagtgaggagagatgtagagctggacagagaaactatcgcc tattacaacatcaccattactgccaaagatctgggaacgccagcgctcagcgctatggtg acagtgggcattcaggtgttggacattaatgataacgaccccgtcctgctcaacttacca tttaacaccagcgtgagcgagggagcagcgatttacacttccatctatcaagtgcgggcg caagactctgacagcggccgcaacgctctcctcacatacagcgtcactgccggcaacact gatggagcgttctacattaatgagacgtcaggtgtgcttcaggtgaacaggcctctggat agagagagagtggctgaatacagactcaccatcaccgtcaaagacaacccagacaaccct cgcatcgcacgcagggactcagatttgttggtagttgccgtgctggatgtgaatgacaac aggcccatcttcacccagaccagctacaggggcgaaatcagtgaaaactcactcaacggc accacagtgttgatcctgaacggccctgttctagcagaggacagagacattggggtgaat gcagtggtgaggtatcgtctcctgggagccagagtggacctcttctcgatagactccctc acagggctggtatcagtgcgtgggggtgctgttctggaccgggaggctttctctgtgcct cgggtggagctgtttctactcggggaggatgtgggaggtttaaacagcagcgttccactc acaatcactatcctcgacataaacgacaacccacctgtcttcaatccatccagtttcact gtacacctgccagagaacagccccacgggtgtggtagtaacgcagctctcggcgagtgac gctgacgccggctctaacggttggttgcagtatcgattagacaccggcgctcaagaccgt ttcatcgttgacgctctctctggtgcggttctggtcggcaatgctacactggaccgggag gaacgtagctcgtaccgcctggtagtcatagcaactgaccgaggcacgccctctctctcc gggacggcgacattgtctgttgttctagatgacatcaacgactcacgtcctcgtttcata cggcccgtgcagacgatcagcgtcaacgagtcaactccacctggagaggttgtagctacg ctcaccgccgaggaccctgatctacgaccccgcctggagtattacatcatctctgtggaa gcaaaggatgatgggaataatccagtggatgggctgcagcagtcgtttgggattgacttc cacacaggggctgtgtttgtacgaaaccccttgaaccgagagctggttgccacttttgag atcatcgtttcagtgcatgacaacgccagtgatgtcattgacatgtcagtcagtgtacct aacgccaaattgaccatcaacgtgctggacgtgaatgacaacgctcctcgttttcgccct ttcggcgtggcgaacttctccgagaggattctggagggtgctgtggctggtaccacactt ctgtcggtgacggctgttgatcctgataaaggacccaatggacagatcatctaccagctc ctgcacctgccccgtggagactacattagacttgaagatccatctacaggtaaaattgtg gccaatcggacggtagattatgaacaagtgcagtggttgaacttcacggtgcgtgctcag gactatggctcgcctcctcgcttcgctgaacttcctgtctatctgcgcatcgtcgatgtc aacgacaacaacccagtctttcaacaacctttatatcagaagtccatttttgaggatgtt gcactcggcaccattattgtgagcgtgagtgcgacagatgcagactctggcctgttttct gtcattgaatacgggctagtggatggagagggcaggtttggcatcacacccagtacgggt gacatctacgtcctgtctgctctagacagagagaccaaagaccgctacactctcacagcc tttgccagagacaaccctggcggcagccccaacaaccgcagagaaaactccgtccaggtg tggatgagctccaaaaaatag

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