Pimephales promelas (fathead minnow): 120479488
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Entry
120479488 CDS
T08155
Symbol
btaf1
Name
(RefSeq) TATA-binding protein-associated factor 172
KO
K15192
TATA-binding protein-associated factor [EC:5.6.2.-]
Organism
pprm
Pimephales promelas (fathead minnow)
Brite
KEGG Orthology (KO) [BR:
pprm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pprm03021
]
120479488 (btaf1)
Transcription machinery [BR:
pprm03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Others
120479488 (btaf1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DUF3535
SNF2-rel_dom
HEAT
Helicase_C
HEAT_EF3_N
TPR_Trm732_C
TOR1L1_N
Vac14_Fab1_bd
HEAT_2
HEAT_EZ
ARM_ECM29
Arm
Motif
Other DBs
NCBI-GeneID:
120479488
NCBI-ProteinID:
XP_039527935
LinkDB
All DBs
Position
Unknown
AA seq
1861 aa
AA seq
DB search
MAVSRLERLFILLDTGTTPVTRKAAAQQLGDVVKLHPHELNNLLSKVLTFLRSPNWDTRI
AAGQAVEAIVKNIPEWNPTPKPKDEVCPEDMSPEDISSDRLSFYRFDISRLLKHGASLLG
SAGVEFEVQDDKSGETDPKERLARQRKQLQKKLGLDMGAAIGMDTEELFNDEDLEDACAS
NTNRTQPGKSLGCHFSRNHMPAAELIDSQFRPGMSNRQKNKAKRMAKLVAKHRSRDMDPN
EKSNDSFEGEPEEKRRKTTNVVIEQPATDSKLLIDNVPDNSGLFEETQEWPLESFCDELC
NDLFNPSWEIRHGAGTGLREVLKCHGAGGGKTVGSTVEQMERQHQEWLEDLVIRLLCVFA
LDRFGDFVSDEVVAPVRETCAQTLGVALRHMANSGVAMTVDILLKLLTEDQWEVRHGGLL
GIKYVLAVRQDLIAALLPRVLPAITEGLRDLDDDVRAVAAAALIPVVDGLVQLQPAKVPF
IVDTLWNALLELDDLTASTNSIMTLLSSLLTYPQVRQCSSQQSLTVLVPRVWPFLRHTIA
SVRRAALETLYTLLSKADQSCAVWLNPIMQDMLRYIFQSCILESNQEILELIQKVWVELL
RQAPQQYVVAASCPWMGAWLCLMMQAPHIPIDPNMLLEVKARLKEKASGKTRQGSIQVKE
TVQEYIGGAETITEDPATRDYVVTRARLMAAKLLGALCNCICDPRLNSSSQELRPAESLA
QLLLFHLNSKSALQRIAVSMVICEWAGLQKECELLSSVVQPRLLTILSEQLYYDEIAIPF
TRMQNECKQLIALLADAQIDVGERINSAVFTIDQANELVTTIFSECTSSLNLKSRQFQPL
DGKRLQAHSTVCETSAEWQQLQLRVHTFTACAVVGLAMLPDKLNPLVRPLMEAARREENI
LVQGYAASNIARLLQLCSTRCPCPNAKIVKNLCSSVCVDPMLTPSAACPVPPASTPAIQE
SSKGSVAEKDAMHHMVNKTKGIITLYRHQKAAFAITSKRGPTPKAPKTNTNNDLPLGGSI
TAETDESKKPCLIQRRGAEFCLMTVARHFGQELTKSLPYLWEFMTVPLRNALNAQGFDSS
QLLKQGDSIAQELVNSLQVLEVTAGAMSQELIPVLMEQLPLLCTCLQHPYTAVRHMAARS
VGVLSKIATMKTMNVFLEHVLPWLGAIDDNTKQEGAIEALACVMEQLDVDIVPYIVLLVV
PVLGRMSDPCDSVRFMATQCFATLIRLLPLEAGIPDPPSMSEDLIRQKARERHFLEQLLD
GRKLENYKIPVPIKAELRKYQQDGVNWLAFLNKYKLHGILCDDMGLGKTLQSICILAGDH
FLRAQEFTRTKAPDCCHLPSIVVCPPTLTGHWVDEVGKFCSKEYLNPLHYTGPPTERARL
QHQVKKHNLIVASYDVVRNDIDFFRDIKFNYCILDEGHVIKNGKTKLSKAIKQLSANYRI
ILSGTPIQNNVLELWSLFDFLMPGFLGTERQFAARYGKPILASRDAKSSSREQEAGVLAM
EALHRQVLPFLLRRMKDDVLQDLPPKIIQDYYCNLSPLQVQLYEDFAKSRAKLDVDDVIS
TTSTQEEEEKPKLKATGHVFQALQYLRKLCNHPALVLTPQHPEYKHITEQLSSQHSNLRD
IQHAPKLSALKQLLLDCGLGSSGASDGCTEAVVAQHRVLIFCQLKSMLDIVEQDLLKTQL
PTISYLRLDGGVQAGLRHSIVSRFNNDPSIDVLLLTTHVGGLGLNLTGADTVVFVEHDWN
PMRDLQAMDRAHRIGQKRVVNVYRLITRGTLEEKIMGLQKFKMTIANTVISQENASLQSM
GTEQLLNLFTLDKDEAVKSEAGASSSGKTSMKSVLDGLGDLWDQQLYENEYDLDSFIHSL
K
NT seq
5586 nt
NT seq
+upstream
nt +downstream
nt
atggctgtttcaaggttggaacgtctgtttatcttattggacacaggaacgactcctgtt
acccgtaaagcagctgctcagcagctgggagatgtcgttaaacttcacccacatgagctt
aataacctactatcaaaggttttaacattcttgaggagtccaaactgggatacgcgaatc
gcagctggacaggctgttgaagccatagtgaagaatattccggaatggaacccaactcca
aagccaaaagacgaggtgtgtccagaagacatgtctccagaggacatctcttcagacagg
ctgagtttctacaggtttgatatctcccgtctgctcaagcatggagcgtcgctgcttggc
tctgcaggagtggagtttgaggtgcaagatgacaaatcaggtgagacggatcccaaagag
cgtttggcccggcagagaaagcagttgcagaagaagttgggattggatatgggcgctgcg
atcggcatggacactgaggagctttttaatgatgaggacctggaggacgcttgtgcctcc
aataccaacaggacacagcctggtaaaagcctaggctgtcacttctcacgcaatcatatg
ccagctgcagagctcatagattcacagtttcgtccaggcatgagcaatcgacagaagaac
aaggccaagaggatggcgaaactggtggcaaagcatagatccagagacatggatcctaat
gagaagagcaatgacagttttgagggagagccagaggagaaacgacggaaaaccacaaat
gtagtcattgagcagccagcaaccgacagcaaactcttaattgataatgtccctgataac
tccggtttatttgaggagactcaggaatggcccctggaaagcttctgtgatgaactgtgc
aatgacctcttcaacccctcatgggagattcgccatggtgccggcacaggactgagggaa
gtgctgaagtgtcatggtgcgggtggaggaaagactgttggcagtacagtagaacagatg
gagcgacagcaccaggagtggctggaggatttggtcatccggcttttgtgcgtcttcgct
ctggacagatttggagactttgtatcagatgaggtggttgcacctgtcagagagacgtgt
gcccagactcttggcgtggccttgaggcacatggccaacagtggcgtcgccatgactgtg
gacattctgctcaagctgctaactgaagaccaatgggaggttcgacacggaggcctgctg
ggcatcaaatatgttcttgctgtgagacaggatttaatcgcagcgctcctgccccgggtt
cttcctgccattacagaaggcctgcgggatctggatgatgatgttcgagctgtggcagca
gcagctttgatccctgtggtggatggattggttcagttacagcctgctaaggttcccttc
atcgtggacacactgtggaatgctctgctggagctggacgatctcacagcctcaactaac
agcatcatgacccttctgtcctcgttgctcacttacccacaggtccgccagtgcagctcg
caacagtctttgacagtgttggttcctcgagtgtggccgttcctcagacatactatcgct
tctgttcgtcgggccgccctagaaaccctctatactctgctttccaaagctgatcagagt
tgtgcagtgtggctgaatcccatcatgcaggacatgttaaggtacatctttcagtcctgc
atcctggagagcaaccaagagatcctagagctgatacagaaggtgtgggtggagttgttg
cgacaggcgccgcagcagtatgtggtggcggccagctgtccttggatgggtgcctggctc
tgtttgatgatgcaagcgccacacatcccaatagaccctaacatgctgctggaagtgaaa
gcccgcttaaaggagaaggcttctgggaagacccggcagggatctattcaagtcaaggaa
acggtccaggaatacatcggtggagcagagacgattaccgaagaccctgccacaagagac
tatgtggtgacacgtgcgcgtctaatggctgcaaagctgttgggggcgctgtgcaattgt
atatgcgacccacggttgaacagctcttctcaggaactccgtcctgccgagtctctagct
caacttttattattccatctcaattccaaatcggccctgcagcggattgctgtgtctatg
gtgatctgtgagtgggcaggccttcagaaggagtgtgagctgttatccagcgtggttcag
ccccgattgctgaccatcctctcagaacaactctactatgatgagatcgccattcctttt
actcgcatgcagaacgaatgcaaacaactcatagcactgctggctgacgcccagattgac
gtgggagaacgaatcaactcggctgtgttcaccattgatcaggccaatgagctggtgacc
accatcttctcagaatgcacgtcctctctgaacctcaagtcacgtcagttccagcctttg
gacggcaagaggctgcaagctcattccactgtgtgcgagaccagcgctgaatggcagcag
ctgcagctgagggttcatacgttcactgcctgcgctgtggtgggactggccatgctgccg
gataaactcaatcctttggtcaggcccctgatggaggcagcccgccgcgaagagaacata
ctcgttcagggttacgcagcctccaacatcgctcgtctgctgcagctgtgctctaccaga
tgtccctgtcctaacgccaagatcgtgaagaatctctgcagctcagtgtgtgtagatccg
atgctcacccctagtgctgcctgtcctgtcccgccagccagcactccagcaatacaagag
agcagtaaagggtctgtggcagagaaggatgcaatgcatcatatggtgaacaagacaaag
ggcatcataacgctttaccggcatcagaaagcagcgtttgccatcaccagtaagagggga
cccacccccaaagcccccaaaaccaacaccaacaatgacctgccccttggaggcagcatt
actgcagaaacagacgagagcaagaagccatgtcttatccagaggagaggtgctgagttc
tgcttgatgaccgttgccaggcatttcggtcaggagttgacaaaatcattgccatatctg
tgggagttcatgaccgttccgctgagaaatgcgctgaatgctcagggatttgattccagc
cagttgttgaagcagggagattcgattgctcaggagcttgtgaactctctgcaggtgctg
gaggtcaccgcaggagccatgtcccaggagctcatccctgtattgatggagcagctgccg
ctcctgtgcacctgtctgcagcatccatacacagccgtgcgtcacatggccgctcgcagt
gtgggtgtgctcagcaagatcgctacgatgaagaccatgaatgtgtttctggaacatgtg
ctgccctggttgggtgctattgatgacaacaccaagcaggagggagccatcgaagccttg
gcctgtgtgatggaacagttggatgtggacattgtgccctacattgtgctgttggtggtc
cctgtgttgggccgtatgagtgacccctgtgacagcgtgcgattcatggccacacaatgc
tttgctactctgatccgactgcttcctcttgaggctggaatcccagacccgccgtcgatg
tctgaagatctaattcggcagaaggccagagaacgacacttcctcgagcagctgctggat
ggaaggaaactggagaattacaagattcctgtgcccatcaaagcagagctccggaaatac
caacaggatggtgtcaactggctggcatttttaaacaagtacaagcttcacgggatcttg
tgtgatgatatgggtctgggtaaaaccttgcagtccatctgtattctggctggcgatcat
ttcctcagggctcaggagttcaccagaacaaaggctcctgactgttgccatttgccctcc
atagtggtgtgtccccccaccctgacaggccactgggtggatgaggttgggaagttttgc
tctaaagagtatctgaatcctctgcactatactggcccccccactgaaagagcacggttg
cagcaccaggtgaagaaacacaatctcatcgttgcctcgtatgatgtcgttaggaatgat
attgactttttcagggatattaaattcaattactgcatccttgacgagggtcacgtcatt
aagaatggaaaaaccaaactctccaaagcgatcaagcagttatctgccaactacaggatc
attctctcaggaacgcccattcagaacaatgttctggagttgtggtctctctttgacttc
ctgatgccaggctttcttggtactgaacgtcagtttgctgcccgctatgggaagcccatc
cttgccagtcgagatgctaaaagttcctcacgtgaacaggaagcaggtgtgctggcaatg
gaagcacttcatagacaggttctgcccttcctcctgaggagaatgaaggatgatgtgctt
caagatctgccacccaagatcatacaagattactactgcaacctcagtcctctacaggtt
caactgtatgaggactttgcaaagtcccgcgcaaagctggacgtggatgatgtaatctca
actacgtctacacaagaggaagaagagaaacccaaactaaaggctaccggacatgtcttc
caggctctgcagtatctgaggaagctgtgtaatcacccggcactggtgctgacccctcaa
cacccagagtacaaacacatcaccgaacagctgagcagccagcactccaacctcagagac
attcagcacgcccccaaactctcagccctcaaacagctgctgttggactgtggactgggt
tcatctggagcgtctgatggctgcaccgaggctgtggtggcccagcatcgtgttctgatc
ttctgccaactgaagagcatgctggacatcgtggagcaggacctgctcaaaacacagctg
cccaccatctcctacctcaggctggacggaggcgttcaggccggcctcagacactccatt
gtctccaggttcaataatgacccgtccattgatgttctgctgctcactacccatgtgggt
ggactgggattgaatctgaccggggctgatactgtggtgtttgtggagcacgactggaac
cccatgagagacttgcaggccatggaccgagctcacagaataggacagaaacgtgtggtg
aatgtgtatcgtctcatcactcgaggcacgctggaggaaaagatcatgggtctgcagaaa
tttaagatgaccatcgcgaatacagtcatcagccaagagaacgccagtctgcagagtatg
ggcacagaacagctgctcaacctcttcacactggacaaggatgaagcagtgaagagcgag
gcgggtgcatcgtcctctggtaaaaccagcatgaagtctgttctggatggactgggcgac
ctgtgggaccagcagctgtacgagaatgaatatgacctggacagcttcatacactccctc
aaatga
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