Pimephales promelas (fathead minnow): 120479511
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Entry
120479511 CDS
T08155
Symbol
eef1a1a
Name
(RefSeq) elongation factor 1-alpha 1a isoform X1
KO
K03231
elongation factor 1-alpha
Organism
pprm
Pimephales promelas (fathead minnow)
Pathway
pprm03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
pprm00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
120479511 (eef1a1a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pprm03019
]
120479511 (eef1a1a)
03016 Transfer RNA biogenesis [BR:
pprm03016
]
120479511 (eef1a1a)
03012 Translation factors [BR:
pprm03012
]
120479511 (eef1a1a)
04131 Membrane trafficking [BR:
pprm04131
]
120479511 (eef1a1a)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pprm04147
]
120479511 (eef1a1a)
Messenger RNA biogenesis [BR:
pprm03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Trans-acting binding proteins
120479511 (eef1a1a)
Transfer RNA biogenesis [BR:
pprm03016
]
Eukaryotic type
tRNA transport factors
tRNA export factors
120479511 (eef1a1a)
Translation factors [BR:
pprm03012
]
Eukaryotic type
Elongation factors
120479511 (eef1a1a)
Membrane trafficking [BR:
pprm04131
]
Autophagy
Chaperone mediated autophagy (CMA)
Other CMA associated proteins
120479511 (eef1a1a)
Exosome [BR:
pprm04147
]
Exosomal proteins
Proteins found in most exosomes
120479511 (eef1a1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GTP_EFTU
GTP-eEF1A_C
GTP_EFTU_D3
GTP_EFTU_D2
MMR_HSR1
Gtr1_RagA
GTP_EFTU_D4
Motif
Other DBs
NCBI-GeneID:
120479511
NCBI-ProteinID:
XP_039528008
LinkDB
All DBs
Position
Unknown
AA seq
462 aa
AA seq
DB search
MGKEKLHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAAEMGKGSFKYAWVL
DKLKAERERGITIDISLWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGV
GEFEAGISKNGQTREHALLAYTLGVKQLIVGVNKMDSTEPSYSQKRYEEIVKEVSTYIKK
IGYNPDTVAFVPISGWNGDNMLEASPNMTWFKGWKITRKEGNASGTTLLEALDAIQPPSR
PTDKPLRLPLQDVYKIGGIGTVPVGRVETGILKPGMVVTFAPVNVTTEVKSVEMHHEALL
EAFPGDNVGFNVKNVSVKDIRRGNVAGDSKNDPPQEAASFTAQVIILNHPGQISAGYAPV
LDCHTAHIACKFAELKEKIDRRSGKKLEDNPKSLKSGDAAIVDMIPGKPMCVESFSEYPP
LGRFAVRDMRQTVAVGVIKAVEKKAATSGKITKSAQKAQKAK
NT seq
1389 nt
NT seq
+upstream
nt +downstream
nt
atgggaaaggagaagctccacatcaatattgtggttattggccatgtggactctggaaag
tccactacaactggccaccttatctacaagtgtggagggattgacaagcgaacgattgag
aagtttgagaaagaagctgctgagatgggaaaaggctcttttaagtatgcctgggtgctg
gacaagcttaaagcagaaagagagagaggaatcaccattgacatctccctgtggaagttt
gagaccagcaaatactacgtcaccatcatcgatgctccaggacacagggacttcatcaaa
aacatgatcactggaacctcacaggcagactgtgccgtgctgatcgtggcggcaggtgtc
ggagagtttgaggctggcatctcgaagaacggtcagaccagagagcacgctcttctggcc
tacacattgggtgtgaagcagctgattgtgggcgtcaacaagatggattccactgaaccc
agttacagccagaagcgttatgaggaaattgtgaaagaagttagcacctatatcaagaag
attggatataatcctgacacagtggcattcgtgcccatctctggctggaatggagataac
atgctcgaggccagtcccaatatgacttggttcaaaggttggaaaataacccggaaagag
ggaaatgcatctgggactaccctattggaggctctggatgccattcagcctccatcacgt
ccaactgacaaacccctccgcctgcctcttcaggacgtctacaagattggaggtattgga
accgtccccgtgggacgtgtggagactggcattttgaagccaggtatggtggtgaccttt
gcccctgtgaacgtgacaactgaagtcaagtctgtggagatgcatcacgaggctcttttg
gaggcctttcccggggacaacgttggctttaacgttaagaacgtctccgtcaaggacatc
cgtcgtggcaatgtcgctggagacagcaaaaacgacccaccccaggaggccgccagcttc
acggctcaagtgatcatcttgaatcacccagggcagatcagtgctggctacgcccctgtg
ctggattgccacactgcgcacatcgcctgtaagttcgcagagctgaaggagaagatcgat
cgtcgttctgggaagaagcttgaggacaaccccaagagcctcaagtcaggagacgcagcc
attgttgacatgatccctgggaagcccatgtgtgtggagagcttttcagagtatcctcct
ctgggtcgttttgctgtgcgtgacatgcgtcagacagtcgcagtgggtgtgattaaagca
gtggagaagaaggccgcgaccagcggaaagatcaccaaatctgctcagaaagcccagaag
gccaaatga
DBGET
integrated database retrieval system
