Pimephales promelas (fathead minnow): 120479560 Help Entry 120479560         CDS       T08155                                  Symbol vcla Name (RefSeq) vinculin a isoform X1   KO K05700   vinculin Organism pprm  Pimephales promelas (fathead minnow) Pathway pprm04510   Focal adhesion pprm04517   IgSF CAM signaling pprm04518   Integrin signaling pprm04519   Cadherin signaling pprm04520   Adherens junction pprm04810   Regulation of actin cytoskeleton pprm04820   Cytoskeleton in muscle cells pprm05100   Bacterial invasion of epithelial cells Brite KEGG Orthology (KO) [BR:pprm00001]  09130 Environmental Information Processing   09133 Signaling molecules and interaction    04517 IgSF CAM signaling     120479560 (vcla)    04518 Integrin signaling     120479560 (vcla)    04519 Cadherin signaling     120479560 (vcla)  09140 Cellular Processes   09144 Cellular community - eukaryotes    04510 Focal adhesion     120479560 (vcla)    04520 Adherens junction     120479560 (vcla)   09142 Cell motility    04820 Cytoskeleton in muscle cells     120479560 (vcla)    04810 Regulation of actin cytoskeleton     120479560 (vcla)  09160 Human Diseases   09171 Infectious disease: bacterial    05100 Bacterial invasion of epithelial cells     120479560 (vcla)  09180 Brite Hierarchies   09183 Protein families: signaling and cellular processes    04812 Cytoskeleton proteins [BR:pprm04812]     120479560 (vcla)    04147 Exosome [BR:pprm04147]     120479560 (vcla) Cytoskeleton proteins [BR:pprm04812]  Eukaryotic cytoskeleton proteins   Actin filaments / Microfilaments    Actin-binding proteins     Cross-linking proteins      120479560 (vcla) Exosome [BR:pprm04147]  Exosomal proteins   Exosomal proteins of other body fluids (saliva and urine)    120479560 (vcla) SSDB OrthologParalogGFIT Motif Pfam:  Vinculin Talin_IBS2B Mob_Pre Motif Other DBs NCBI-GeneID:  120479560 NCBI-ProteinID:  XP_039528109 LinkDB All DBs Position Unknown AA seq 1131 aa AA seqDB search MPVFHTKTIESILEPVAQQISHLVIMHEEGEVDGKAIPDLTSPVAAVQAAVSNLVRVGKE TVQTTEDKIMKRDMPPAFIKVENACAKLVEAAQMLKTDPYSVPARDYLIDGSRGILSGTS DLLLTFDEAEVRKIIRVCKGILEYLAVAEVVETMEDLITYTKNLGPGMTKMAKMIDERQQ ELTHQEHRVMLVTSMNTVKELLPVLISAIKIFVTTKCTKSHGVEEALKNRNYTFEKMSAE INEIIRVLQLTSWDEDAWANKKDTEAMKRALALIESKMGPAKIWLRDPNGLPGDPGEHAL RQILDEAEKVGELCAGKERREILGTAKTLGQMTDQVSDVRARGQGATPMGMQKAQQVGQG LDILVGKVENAARKLEALTNAKQAIAKRIDTAQSWLADPNGGPEGEENIRALLAEAKRIA DLCEDPKERDDILRSISEIAGLTARLVELRKMGKGDTPEARSLAKQIGTALQNLQAKTNR AVANMRPAKAAVTLEGKMEQALRWINNPGVDDHGVGQAAIRGLIAEGRRLANSLPGPYRQ ELLAMCERVEQLMMQLADLAVRGEGESPQARAVVAHLLEAIKDLKAKMQEAMTKEVSDVF SDTTTPIKLLAVAATAPLEAPNREEVFEERASNFENHASRLGATAEKAAAVGTANKSTVE GIQAAVKSARGLTPQVTSAARILLKNPGNQAAYEHFETMKNQWIDNIEKMTSLVDEAIDT KSLLDASEEAIKKDIDKCRVAMANVQPQLLVAGATSIARRANRVLLVAKREVENSEDPKF RELVKAASDDLGRTISPMVMAAKAVAGNIQDPGLQKSFLDSGYRILAAVGKVREAFQPQE PEFPPPPPDLDQLHVNDDQAPPKPPLPEGEVPPPRPPPPEEKDEEFPEQKAGEMVSEPMM VAARQLHDEARKWSSKPEVTDEGFEAAEAEVDIDDEDEFTDNEDDYEPELLLMSSNQPVN QPILAAAQSLHQEARKWSSKGNDIIGAAKRMALLMAEMSRLVRGGSGNKRALIQCAKDIA KASDEVTRLAKEVAKQCTDKRIRTNLLQVCERIPTISTQLKILSTVKATMLGRTNISEEE SEQATEMLVHNAQNLMQSVKETVREAEAASIKIRTDAGFTLRWVRKTPWYQ NT seq 3396 nt NT seq  +upstreamnt  +downstreamnt atgccagttttccataccaagacgatagagagtatcctggagccggtggctcagcagata tctcacttggttatcatgcacgaggagggcgaagttgatgggaaagcgatcccagatctc accagcccagtggcggcagtgcaagcggctgtcagcaacctcgtgcgggtggggaaggag acggttcagaccacagaagacaagattatgaagagagacatgcctccggccttcattaag gtggagaatgcctgtgcgaagcttgtggaagcagctcagatgctgaagacagacccgtac tctgtcccggcccgtgattacctcattgatggctcgcggggcatcctctctgggacttca gatctgcttttgacctttgacgaggcagaggtgcgtaaaattatccgcgtgtgtaagggg atcctggagtacctggctgttgcagaggttgtggaaaccatggaggacttgatcacttac actaaaaacctgggaccaggcatgacgaaaatggcaaagatgattgacgaacggcaacag gagctgactcaccaagagcaccgtgtgatgctggtcacctccatgaacacagtgaaggaa ctgcttcccgtgctcatatctgcaattaaaatctttgtgacaaccaagtgcactaagagt cacggtgtggaggaggccttgaagaacagaaactacacgtttgagaagatgagcgccgag atcaacgagattatcagagtgctgcaactcacttcttgggacgaggacgcctgggccaac aaaaaggacactgaggccatgaagagagcgctagctctgatagagtcaaagatgggtcct gctaaaatatggctgagggaccctaacggcctaccaggagatccaggagagcatgctttg cgtcagatactggatgaagcagaaaaagtgggtgagctttgtgctgggaaagagagacga gagatcctgggaacagccaagaccttgggccagatgacggatcaggtgtcagatgtgcgc gccagaggtcagggtgccacccccatgggtatgcagaaagctcagcaggtgggccagggt ttggatattcttgtgggaaaagtggagaacgctgcccgaaagctggaggccctgaccaat gccaaacaggccatcgccaagagaatcgacacggcccagagctggctggctgatcctaac ggtggtccggagggggaagagaacatccgtgctcttctggcagaggccaagcgcattgct gacctgtgtgaagaccctaaagagagagacgacattctgcgctccatcagtgagatcgca ggactcactgcgagactggttgaacttcgtaaaatgggtaaaggggatactcctgaggct agatcgctggccaaacagattggcacagctttgcaaaacttgcaggcaaagactaaccgt gccgtggccaacatgagacctgccaaggcagctgttacactagagggcaaaatggagcag gctttgcgctggattaacaaccctggagtggacgatcatggagtaggccaggctgccata cggggactgatagctgagggccgccgattggcgaactctctaccaggcccgtacagacag gagctgctagcaatgtgtgagcgagtggagcagctgatgatgcagttggcagatctggct gtgcggggagagggagagagtcctcaggcgcgcgctgtggttgctcatctgctggaggca attaaagatctgaaggcaaagatgcaggaggcaatgaccaaggaggtgtctgatgttttc agtgatacaaccacaccaattaaactcctggctgtagcagcaacagctcctcttgaggcc cccaacagagaggaggtctttgaagaaagggcgtctaactttgagaatcatgccagcaga ctgggtgctacagcggagaaggccgctgctgtgggaacagccaataagagcacagttgaa ggcattcaggcggccgtgaaatcagccagaggtctaacacctcaggtcacttctgctgca cgcattttgctgaagaaccctggcaaccaggctgcctatgagcacttcgagaccatgaag aaccaatggattgacaacattgaaaaaatgaccagtcttgtggatgaagccattgacacc aaatccctcttggatgcttcagaggaggccattaagaaagacattgataaatgccgggtg gcaatggctaatgttcagccccagttgttggttgcaggggctacgagcattgcccggcgg gctaacagggtacttctggtggccaagcgggaagtggaaaactcagaggaccctaaattc agagaactagtcaaagctgcttcggatgatcttggtagaaccatctcacccatggttatg gctgctaaagctgtagcaggaaacatccaggatccaggtttgcaaaagagcttcctggac tctggctacaggatcttggctgctgttgggaaagtaagggaagccttccagcctcaggag cctgaattcccacctccacctccagacttggatcagctgcatgtcaatgatgaccaggct cctcccaaaccgcccctccctgagggagaggttcctcccccgagacctccacccccagag gagaaagatgaagagttccctgagcagaaagccggcgagatggttagcgagccgatgatg gtggcggccaggcaactacacgacgaggcccgtaaatggtccagcaaacctgaggtcaca gacgagggttttgaggccgctgaggcggaggtagatatagatgatgaggatgaattcaca gacaacgaggatgattatgagccagagctgctcttaatgtcttccaatcagccagttaac cagcccattctggccgctgcgcagtctttacatcaggaggctcgcaagtggtccagtaag ggtaatgacatcattggagcggcgaagcgcatggccttgctcatggcagagatgtctcgt cttgtgcgtggaggcagcggaaataaacgtgcccttattcagtgtgccaaggacattgct aaggcctccgatgaggtcacgcggctggctaaagaggtagccaagcaatgcaccgacaaa cggattcgcacaaacctgttgcaggtttgtgagcgtatcccaactatcagcactcagctg aagatcctgtccacagtcaaggccactatgctgggacgtacaaacatcagtgaggaagaa tctgagcaggccactgagatgctcgtgcacaatgcgcagaacctcatgcagtccgtgaag gagacggtcagagaagcagaagccgcctccatcaagatccgcacagacgcagggttcact cttcgctgggtccgaaagaccccctggtaccagtaa

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