Pimephales promelas (fathead minnow): 120479616
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Entry
120479616 CDS
T08155
Symbol
hif1aa
Name
(RefSeq) hypoxia inducible factor 1 subunit alpha a isoform X1
KO
K08268
hypoxia-inducible factor 1 alpha
Organism
pprm
Pimephales promelas (fathead minnow)
Pathway
pprm04137
Mitophagy - animal
pprm04140
Autophagy - animal
pprm04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
pprm00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
120479616 (hif1aa)
04137 Mitophagy - animal
120479616 (hif1aa)
04148 Efferocytosis
120479616 (hif1aa)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pprm03000
]
120479616 (hif1aa)
Transcription factors [BR:
pprm03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Factors with PAS domain
120479616 (hif1aa)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
bHLH_HIF1A
PAS_11
PAS_3
HIF-1a_CTAD
HIF-1
PAS
PAS_9
PAS_4
HLH
PAS_2
Motif
Other DBs
NCBI-GeneID:
120479616
NCBI-ProteinID:
XP_039528226
LinkDB
All DBs
Position
Unknown
AA seq
733 aa
AA seq
DB search
MAPAAELFSKPLVQCGYGIIPYRVSSERRKEKSRDAARCRRGKESEVFYELARELPFPHS
ITSNLDKASVMRLALSYLRLRKLLNADVLDVETELGSQWNSSYLKALDGFLMVLSADGDI
VYLSENVSKCLGLPQIDLTGHSVFDFTHPCDHEELREMLAHRNGLCKNAKEFPTNRSFLL
RMKCTLTSRGRTVNVKSASWKVLRCSGHIHTADGVVKEKNACSTYLVLICESIPHPANIE
APLDSRTFLSRHTLDMRFTYCDERITELLGFDPVDLLQHSVYEYYHALDSGHMTKTHHKL
FVKGQVCTGQYRLLAKAGGFVWAETQATVIYNSKNSQPQCVVCINYILSGIEQPKQILSL
QQTNSTKIKQEQEEHQEEFLGADVTMAELKEEGKQREEKEEESVEEELNDSLEGEPEALT
VDPVLTLDFTTTDSAVSVLTEIPLYNDVMLPCSSVPLPLSPLSHPCSSLNEDDASTANLQ
PDDFPFPQTLASSRSQVDLHVDSEFSNQLKPDHVEKLFSMDMESKTHFNTQGVGLDLEML
APYIPMDDDFQLRTVSPAESMCSSPGAALELTPSSSMQTAPALPAVPTDLMSCDTVQHDT
RTTEQDSSREIIQDRDISSKCQTNPKLLKRKLETIPLSEAIRLGSVLQLVTDFPEKKARK
SDASSSEGIRHATILLLPSDVASRLLSRSSEGGTITMPLPQLTRYDCEVNVPVTGRQHLL
QGEELMCALDLVI
NT seq
2202 nt
NT seq
+upstream
nt +downstream
nt
atggcacctgcagctgaattattttccaaaccgctggtccaatgtggctacggtataata
ccatacagggtgagctcagagcgaaggaaggagaaatcccgagatgcagcacgttgtcgg
agaggaaaagaatcggaggtgttttatgaactggccagagaactacccttcccccacagc
atcacctctaacctggataaagcatcagtcatgagactcgcactcagttacctgcgcctg
cgtaagctactgaacgcagatgtactggatgtggagactgaattgggctctcagtggaac
agttcatatctgaaagctctggatgggtttctcatggttctttctgctgacggtgacatc
gtctacctgtcagagaatgtcagcaagtgtctaggcctacctcagattgaccttactgga
cacagtgtgtttgactttactcatccatgtgatcacgaggagctcagagaaatgctggca
cacagaaatggtctgtgtaagaatgcaaaagagtttcccacaaatagaagttttctattg
aggatgaaatgtacactgaccagcagagggcgtactgtcaatgtcaaatctgcctcctgg
aaggtgctgcggtgttcgggccatatccacacagcagatggtgtcgtgaaggaaaaaaat
gcgtgttcaacgtacctggtgctcatctgtgagtctattccccacccggcaaacattgag
gctcctctggattctagaacattcctcagccgccacactttagatatgcgcttcacctac
tgcgatgagaggatcacagagctgttgggtttcgatccagtggatctgttgcagcattct
gtgtatgaatactatcacgctctggattctggccacatgaccaaaacacaccataagttg
tttgtaaagggacaagtgtgtaccggacagtaccggctgctggctaaagcaggaggattt
gtttgggcagagactcaggccactgtgatctataacagtaaaaactcccagccacagtgt
gtggtctgcatcaactacatcctcagtggcattgaacagcccaaacaaatcctgtccctt
cagcaaaccaacagcacaaaaataaagcaagaacaggaagaacaccaggaggagttcctt
ggggctgatgtgaccatggctgagttgaaagaggagggaaaacagagggaggaaaaggaa
gaggagtctgtggaagaggagttaaatgacagcctagagggggagccagaggcactgact
gtagaccctgtcctcacactggatttcactaccacagactcggcggtctctgtgctgaca
gaaattcctctctacaacgatgtgatgttgccctgttcaagtgtaccgctacccctctca
cccctctctcatccctgttcctccctaaatgaggatgatgcctccacagccaatctacaa
cctgatgacttccccttcccacaaactttggcttcttccagatcccaggttgatctccat
gtggattcagaatttagtaaccagctaaaaccggatcacgtggagaaactattttccatg
gatatggagtccaagacacactttaatacacagggagttggtttggatctggagatgtta
gctccatacattcccatggatgatgatttccagctgcggactgtttctccagccgagtcg
atgtgttccagcccaggtgcagcgcttgaactgaccccctccagcagcatgcaaactgcc
cctgctctcccagcagtccctacagacttgatgtcctgtgacaccgttcagcacgatact
agaaccacagagcaggacagcagcagagaaattattcaagacagggatatttcttctaaa
tgtcagaccaacccaaagctgctcaagaggaaacttgaaaccatacctctgtctgaagca
ataagactggggtctgtgttgcagttggtgactgattttccagagaaaaaggccagaaaa
tcagacgcttcatcatccgaagggattcgacatgccacgattctgttgctaccatctgat
gttgcgagtagattgttgagcagatcgtcagagggtggaacaataactatgcccctcccc
cagcttacccgttacgactgtgaggtaaatgtgcctgtgactggacggcagcacttgtta
cagggggaggagctaatgtgtgccttagacctagttatttaa
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