Pimephales promelas (fathead minnow): 120479739
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Entry
120479739 CDS
T08155
Symbol
tlr4bb
Name
(RefSeq) toll-like receptor 4b, duplicate b
KO
K10160
toll-like receptor 4
Organism
pprm
Pimephales promelas (fathead minnow)
Pathway
pprm04145
Phagosome
pprm04217
Necroptosis
pprm04620
Toll-like receptor signaling pathway
pprm04621
NOD-like receptor signaling pathway
pprm05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
pprm00001
]
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
120479739 (tlr4bb)
09143 Cell growth and death
04217 Necroptosis
120479739 (tlr4bb)
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
120479739 (tlr4bb)
04621 NOD-like receptor signaling pathway
120479739 (tlr4bb)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
120479739 (tlr4bb)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pprm04131
]
120479739 (tlr4bb)
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
pprm04054
]
120479739 (tlr4bb)
04090 CD molecules [BR:
pprm04090
]
120479739 (tlr4bb)
00536 Glycosaminoglycan binding proteins [BR:
pprm00536
]
120479739 (tlr4bb)
Membrane trafficking [BR:
pprm04131
]
Endocytosis
Phagocytosis
Toll-like receptors
120479739 (tlr4bb)
Pattern recognition receptors [BR:
pprm04054
]
Membrane-bound pattern recognition receptors
Toll-like receptors
120479739 (tlr4bb)
CD molecules [BR:
pprm04090
]
Proteins
120479739 (tlr4bb)
Glycosaminoglycan binding proteins [BR:
pprm00536
]
Hyaluronan
Cell surface receptors
120479739 (tlr4bb)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LRR_8
LRR_4
TIR
TIR_2
LRR_1
LRR_14
LRR_6
LRR_5
LRR_At5g56370
LRR_Zer-1
LRR_9
ThsB_TIR
DUF4327
Motif
Other DBs
NCBI-GeneID:
120479739
NCBI-ProteinID:
XP_039528426
LinkDB
All DBs
Position
Unknown
AA seq
823 aa
AA seq
DB search
MILSYRELMIFLSSILILVNAGEGQECTTIIKNMEYSCFGRNLTHIPSSIPLTVTSLDFS
FNFLNSLHKCVFPVLFNLQVLDLTRCHIEHIENDTFYNVKNLTKLILTGNPIAYFGPGCL
NSLHNLQRLVLVDVGLASLQLQMNNLTKLRELRVGTNGIQSVSLPPFMSSFKDFSLLDLH
ANNISIIKTDHTVVLRKIGRNMTLILSRNPLLHIEPGAFQDVFLRELDIRSAFVSLNAQN
SCLNALTGLSVDKLFMGSYRMQWKIQVSDPNYLDALCSVNFNEIYLVQKEFSDSEMNLFH
CMINATKITLKVGYIKRMEHVRFHRLKELYLGHTLLSVVPDISHIPSLEKLVVKNIVPMS
FFGIGIGVSDSLLQYVDFSGNLLILKDCCYQFFPSAPNIRFLNLSQNSEISMVNNPFSGL
EKLEVLDLHRTKLVIVFYFTFLRGLKNLKYLDISYTSITVTKYMIFQDLQNLTVLKMAGI
SFSGDILRYFLQNITNLEVLDLSHCGIGEISRTSFTGTQKLRHLYLSKNKLMVLDFLAQP
ELKQLTSIYIDKNSISSIPLHVLQKFPANLSELDLSSNPFDCSCSQTDIILWIIQNQNIL
KQSENIFCKTLSPSSDFRAVDFDIDSCVQKKRLTIVVSVCIVSLVVVLSGLAYKFQFYLQ
YFFILLRGYRSTGQQECSYDAFVIFSSYDEVWVMNELMENLENGVPPIHLCLHMRDFQPG
KSIASNIIDEGIMGSRKVIVVVSQHFIDSAWCRFEFELAQSRFMMERNANIIIVILEDVE
ETKTKKVFGLHKHLKKNTYLKWSRDPLSNMRFWIRLRRAIINQ
NT seq
2472 nt
NT seq
+upstream
nt +downstream
nt
atgatcttatcataccgtgaactcatgattttcctaagctcaattttgattcttgtgaat
gctggagaaggacaggaatgtaccacgataataaagaatatggaatactcatgttttggg
agaaatctgactcacattcccagcagtattcccctcactgtgacgtctctggatttcagt
ttcaatttcttgaactctttacataagtgtgtatttcctgtattgttcaatttacaagtt
ttggacctcacaagatgccacatcgagcacattgaaaatgatactttctacaatgtgaag
aatttgactaaattgattctcactggaaaccctattgcatattttggacctggatgcttg
aattctttacataatctacagaggctagttcttgtggatgttggtctcgcgtccttacag
cttcaaatgaataaccttactaagctacgggaacttagagttggaacaaatggcatccag
tccgtgtctctccctccattcatgagctcctttaaagatttcagtttacttgatctacat
gccaataacatatccatcattaaaactgatcacactgttgtgttgagaaagattggcaga
aacatgactttgattctctctaggaatccattattacacattgaaccaggagctttccaa
gatgtttttctcagagagctggatattcgatctgcatttgtttcattaaatgcacaaaat
agttgtctaaacgctcttactggtctcagtgtggataagttgttcatgggaagttacaga
atgcaatggaaaatccaggtgtcagatccaaattatctcgatgctctttgttcagttaat
ttcaatgaaatatatcttgttcaaaaagaattctctgattctgaaatgaacttgttccat
tgtatgatcaatgcaacaaaaatcacattgaaagttggatatatcaaaagaatggaacat
gttcgatttcaccgtcttaaggaactgtatttaggtcacactttattatctgttgtacca
gatatttcacacataccaagcttagaaaaattggtggtgaagaatattgtgcctatgtcc
ttttttggtattggtattggtgtcagtgactctcttcttcagtatgtcgatttcagtgga
aaccttttgattttgaaggactgctgttaccaattttttccaagtgcaccaaatattcga
ttcttgaatcttagtcaaaactcagagataagtatggttaataatccattttctggactt
gaaaaacttgaagtgttggacctccaccgtacaaaactagttattgttttttactttaca
tttttacgaggtctaaaaaatttaaagtatttggatatttcctacacaagtattactgta
acaaagtacatgatttttcaggacctgcaaaatttgactgtgctaaaaatggcgggaatc
agtttcagtggagatatattgagatatttcttacaaaatattacaaatttggaagttctt
gacctctcacactgtggcatcggagaaatctccaggacttcttttactggcacgcagaaa
ctaagacatttatatttaagcaaaaacaagttgatggttttggactttctggcccaacca
gagctgaaacaacttacatcaatttatatcgataagaacagcatttctagcatcccactt
catgttctccaaaagttccctgcaaacctttcagagttggacttgtcctccaaccccttc
gattgttcctgctcccagacagatattattttgtggatcatccaaaatcagaacattttg
aagcaatcagaaaatattttctgtaaaaccttgtcaccaagctcagattttagagcagtg
gactttgacattgacagctgtgtgcaaaagaaaagactcacaattgttgtatcagtatgt
attgtttcattagtagttgtgttgtcaggcttggcttataagttccagttttatcttcag
tatttttttattttactgagaggctacagatcaactggacaacaagaatgttcctatgat
gcatttgtgattttctccagctatgatgaagtctgggtcatgaatgaactgatggagaat
ctggagaacggtgttccacctattcatctttgccttcacatgcgggactttcaaccaggg
aagtccatcgcctccaacattattgatgaaggaataatgggcagtcgtaaagtcattgtg
gttgtgtctcaacacttcattgatagcgcctggtgtcgctttgagtttgaattagctcag
tcccggtttatgatggaacgcaatgccaacatcatcatcgtcattctggaggatgtggaa
gagacgaagactaagaaagtgtttggtcttcataagcatctgaaaaagaacacgtacttg
aagtggagcagggaccctttgagtaacatgagattctggatacggctcaggagagctatt
ataaatcaataa
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