Pimephales promelas (fathead minnow): 120479741 Help Entry 120479741         CDS       T08155                                  Name (RefSeq) toll-like receptor 4 isoform X1   KO K10160   toll-like receptor 4 Organism pprm  Pimephales promelas (fathead minnow) Pathway pprm04145   Phagosome pprm04217   Necroptosis pprm04620   Toll-like receptor signaling pathway pprm04621   NOD-like receptor signaling pathway pprm05132   Salmonella infection Brite KEGG Orthology (KO) [BR:pprm00001]  09140 Cellular Processes   09141 Transport and catabolism    04145 Phagosome     120479741   09143 Cell growth and death    04217 Necroptosis     120479741  09150 Organismal Systems   09151 Immune system    04620 Toll-like receptor signaling pathway     120479741    04621 NOD-like receptor signaling pathway     120479741  09160 Human Diseases   09171 Infectious disease: bacterial    05132 Salmonella infection     120479741  09180 Brite Hierarchies   09182 Protein families: genetic information processing    04131 Membrane trafficking [BR:pprm04131]     120479741   09183 Protein families: signaling and cellular processes    04054 Pattern recognition receptors [BR:pprm04054]     120479741    04090 CD molecules [BR:pprm04090]     120479741    00536 Glycosaminoglycan binding proteins [BR:pprm00536]     120479741 Membrane trafficking [BR:pprm04131]  Endocytosis   Phagocytosis    Toll-like receptors     120479741 Pattern recognition receptors [BR:pprm04054]  Membrane-bound pattern recognition receptors   Toll-like receptors    120479741 CD molecules [BR:pprm04090]  Proteins   120479741 Glycosaminoglycan binding proteins [BR:pprm00536]  Hyaluronan   Cell surface receptors    120479741 BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  LRR_8 TIR LRR_4 LRR_14 TIR_2 LRR_1 LRR_5 LRR_9 LRR_R13L1-DRL21 ThsB_TIR DUF4327 Motif Other DBs NCBI-GeneID:  120479741 NCBI-ProteinID:  XP_039528428 LinkDB All DBs Position Unknown AA seq 817 aa AA seqDB search MSFFTVSAFMIFVFIAAGESCTKITENLHYSCMGRNLSYIPPTISPSVQILDFSFNVLKH LQRTVFPVLSFLRVLDLSRCHIEHIENDTFYNVKNLTKLILTGNPIAYFGPGCLNSLHNL QKLVLVDVGLASLQLQMNNLTKLRELRVGTNDIQSVSLPPFMSSFKDFSLLDLHANNISI IKTDHTIVLRKIGGNMTLILSRNPLLHIEPGAFKGVYLRELDIRSVFVSFANQKVGLKAL YGLNVKKLLFGKYRGDFKFQFSDVDILDGLCSIFFQEIYYYINERPSEPYSVFRCMINAT NVVVKNGIIGEMEYVFFHEIKELYLISNILNSLLGKLSHLHTLEKLVVTHNNNLILAATF IDMPKLQYMDLSANRITFNQCCTMLLSGTPQIRYLNLSLNVEIDLDLRAFDRLDSLEILD FHHTRVVGMGYLSLSNLKNLRYLDVSYSSITFGKINCFHGLSSLKVLKMAGSHFQGDVTR FLFNNLTVLEHLDMSYCRIVELHPSSFKNLQRLRLLNVRGNNLMTIDFLVHPSLKQVTSF YVDKNSITSIPLHVLQKLPANLSELDLSSNPIDCSCSQTDFILWIIQNQNILKQSENIFC KTLSPSSDFRAVDFDIDSCVQKKRLTIVVSVFIVSLVVVLSGLAYKFQFYLQYCCILLRG YRSPGQQECSYDAFVIFSSYDEVWVMNELMENLENGVPPIHLCLHMRDFQAGKSIASNII DEGIMGSRKVIVVVSQHFIDSAWCRFEFELAQSRFMMERNANIIIVILEDVEETKTKKVF GLHKHLKKNTYLKWSRDPLSNMRFWIRLRRAVIATKQ NT seq 2454 nt NT seq  +upstreamnt  +downstreamnt atgagtttctttactgtaagtgctttcatgatatttgttttcatagctgctggagaatca tgcactaaaattacggagaatctgcactactcatgcatgggaagaaacctcagctacata ccaccaactatttctccatcagttcaaattctggattttagttttaacgttttgaaacac ttacagaggactgtattcccggttctgtcttttctacgagtccttgatctgtcaagatgc cacatcgagcacattgaaaatgatactttctacaatgtgaagaatttgactaaattgatt ctcactggaaaccctattgcatattttggacctggatgcttgaattctttacataatcta cagaagctagttcttgtggatgttggtctcgcgtccttacagcttcaaatgaataacctt actaagctacgggaacttagagttggaacaaatgacatccagtccgtgtctctccctcca ttcatgagctcctttaaagatttcagtttacttgatctacatgccaataacatatccatc attaaaactgatcacactattgtgttgagaaagattggcggaaacatgactttgattctc tcaaggaatccattattacacattgaaccaggagctttcaaaggtgtttatctcagagag ctggatattcgatctgtatttgtttcattcgctaatcagaaagttggtctaaaagctcta tatggtcttaatgtaaaaaaattgttatttggaaagtacaggggagatttcaaatttcag ttctcagatgttgatattttagatggcctttgctctatctttttccaggaaatttattat tatattaatgaaaggcccagtgaaccatattctgtctttcgctgtatgatcaatgctaca aatgtggtcgtgaagaatggtataattggtgaaatggagtatgtattttttcatgaaatc aaggagctttacttgatttccaatatcttaaattctttgcttgggaaactttcacatctc catacattagaaaaactagtagttacacacaacaataatcttattcttgctgcaaccttt atagacatgcctaaacttcaatatatggatctaagtgcgaaccgaattacatttaatcag tgctgcacaatgcttttatctggcacccctcaaatcagatatttgaatttgagtctaaat gtggaaattgatcttgatctaagagcatttgatagacttgattcccttgaaattctagat tttcatcatacaagggttgtaggtatggggtacctttcactttctaacttgaagaatttg aggtatcttgatgtttcttattccagtatcacttttggtaaaataaattgctttcatggg ctaagcagtcttaaggttctcaagatggcaggaagtcattttcagggtgatgtaacaaga tttttatttaataatcttacagttctagagcaccttgacatgtcttactgtcgcattgta gagttacacccaagctcttttaaaaatctccaaagacttagacttttgaatgtgagagga aacaatttaatgactatagattttcttgtccacccaagcctgaaacaagtaacatcattt tacgtcgataaaaacagcattactagcatcccacttcatgttctccaaaagttgcctgca aacctttcagagttggatttgtcctccaaccccatcgattgttcctgctcccagacagat tttatattatggatcatccaaaatcagaacattttgaagcaatcagaaaatattttctgt aaaaccttgtcaccaagctcagattttagagcagtggactttgacattgacagctgtgtg caaaagaaaagactcacaattgttgtatcagtatttattgtttcattagtagttgtgttg tcaggcttggcttataagttccagttttatcttcagtattgctgtattctactgagaggc tacagatcacctggacaacaagaatgttcctatgatgcatttgtgattttctccagctat gatgaagtctgggtcatgaatgaactgatggagaatctggagaacggtgttccacctatt catctttgccttcacatgcgggactttcaagcagggaagtccatcgcctccaacattatt gatgaaggaataatgggcagtcgtaaagtcattgtggttgtgtctcaacacttcattgat agcgcctggtgtcgctttgagtttgaattagctcagtcccggtttatgatggaacgcaat gccaacatcatcatcgtcattctggaggatgtggaagagacgaagactaagaaagtgttt ggtcttcataagcatctgaaaaagaacacgtacctgaagtggagcagggaccctttgagt aacatgaggttctggatacggctcaggagagctgttattgccacaaaacaataa

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