Pimephales promelas (fathead minnow): 120479761
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Entry
120479761 CDS
T08155
Symbol
rab11fip5a
Name
(RefSeq) uncharacterized protein rab11fip5a isoform X1
KO
K12484
Rab11 family-interacting protein 1/2/5
Organism
pprm
Pimephales promelas (fathead minnow)
Pathway
pprm04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
pprm00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
120479761 (rab11fip5a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pprm04131
]
120479761 (rab11fip5a)
Membrane trafficking [BR:
pprm04131
]
Protein recycling
Rab GTPases and associated proteins
Rab11 associated proteins
120479761 (rab11fip5a)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
C2
RBD-FIP
DUF4635
Motif
Other DBs
NCBI-GeneID:
120479761
NCBI-ProteinID:
XP_039528454
LinkDB
All DBs
Position
Unknown
AA seq
1616 aa
AA seq
DB search
MSLVKNDEEHRWVPTHVQVTVLRARGLRAKGKHGTSDVYTIIQLGKEKYSTCVMEKTTDP
EWGEECAFELLPGILEKGGRDAYPPGSGDLTLTVMHRALIGLDVFLGQAVIPVDKAFQDR
KSMKNEWHLLHSKSGKKEKERGQLQLTVQFTRHNLTASMYDLSMKDKPRSAFDKLRERMR
AKKRSSEEDSSSAIVSGGYGSMVSVRGRLPSDGGGEEDYEDDEGGEVRRSKMRSFFLRGR
LRKSSDTRSSTSLGSESSESSSRGGSLSPTAGISVVVSDLSNSPSNSSNLTADSSPEHTV
APSPQVSPVRQMMYDISLPVPHSVTSENDTPILLPSVCVNGNPVETSPLTHHPPSLILQQ
PQRESTKPVTQSGQPQATKLPVKPQKTQSIEQKSQETRLSESKPRPEPQLPALGVLQKGS
SLSLSLQNISRRREEKQNGGPVDGRRWSFDKPGEEEKAAIVAALEHAGRVTDEAVMETVI
PAGETETQSKKRRGLFSHGRGDSAGKGPIMSKEEAEHAQPLVEVKHKGWFGSKDSYSKPS
PLVSPWSLSSPIAPLNFNDPSQSMADKHANPFTSLPPFSEANPFLPHAQQNPFFQELHSA
APSTPDVPSLFSSQSSGNATPDLLRIGNKKGPSQIDFSFDPLISHFEGPTEKDEFENFAE
DRLKSSDEMNETKNLVTPPPLLLKTNNQEPLGALGGLMVSDTNDLTDLGQTASASTVETP
KESAADTIQVSGSDVNYICSSSDKPDPTDHGAHGFPEFDMNLSKISLPENSSLDFSELNI
LACPYPALSPRSTNEDRSDAATLKDQPKMSLNSQSAKSDATEPSLSEADTVDLLHDVCIE
FSEGVFVNPETSQRPEAPESATDIESVIVHEDPLPFSSGDNLEQSTVKSDSIGGVLDHQS
IEPCLSPKSDIIPGNTIQSDEEFWRSDASLIQTVAVSGKSLETTELSRSQVQLAPSSLLS
ATLPVKNGEKTDAVMDTMIQNESGDGLLEGGNSKDVCSEIEESVPENLFDGHSFPRLSYD
MQEDKQKVSELPTSPCKNDLTGNLLASISEEQEITNSNGTTHPVRHILPTTGIRTGTDPN
FVLSPGSVLLHSMYKSAESDQYITCVSQQDSVSQSLELTQDVKPKHNWSVEDTLPNHISN
AMPKVDTSVNVVPEMACKQNQVIEENIKPFQEVLPKPESPQDVQPRNCLLDLQPETHTFT
PKLAPSCNTSSENMIKSDFDKAMVQCNPSGDNVEKYDFSKDMMPIVITSDMIAELEAQLA
PLDTETCLVNNCKTCPTKQNDSQELQKDESHNIKSVGILSEGNLHLAQLNEPNVFASDCG
LEQTSSITQDLVITDSGLENIFLPQPTETHLLCTSTRPVANLEFAESLDRNAEMWTTPAD
QDSEAPVLFPVSWPNLPQPSAPSLCEQPTLASRHDHTLNFTSSLFDLSPVASSTPHIAVF
PFPIIPPTTAESLPRPGHAPLPTVQPVNSTSYNPFIQDKPQAFDHQSSPHPVKPLTPPDE
KRSEGRSVLEKLKSTIHSGRSHHSDQDADKKPLVEGGGSYYHLNHGDLVKLLIQRDTELR
QEREDYEKRRALLEKRETELKKMKLLIRDLEDYIDTLLVRIMEQTPTLLQVRNKMK
NT seq
4851 nt
NT seq
+upstream
nt +downstream
nt
atgtccttggtaaagaatgacgaggagcatcgatgggtgccaacgcacgtgcaggtaacc
gtgctacgggcccgagggctgcgcgcgaagggtaaacacggcactagcgatgtgtacacc
atcatccagctgggcaaagagaaatattccacgtgcgtgatggagaagactacggacccg
gaatggggcgaggaatgcgcgttcgagctgctgccggggatcctggagaagggagggcga
gacgcgtacccacccggtagtggcgacctgaccctcaccgttatgcaccgtgctctcata
ggactagatgtgttcctgggccaggctgttataccggtagataaagccttccaggatcgc
aaaagcatgaaaaacgagtggcacctgctgcattcaaaatctggcaaaaaggagaaggaa
agagggcagcttcagttgacggtgcagttcactcggcacaacctgacggccagcatgtat
gacctttccatgaaggacaaaccccgctcggctttcgacaagctcagagaacgcatgcgg
gctaagaagcgctctagcgaagaagattcctcttccgccatcgtctctgggggatacggg
tcaatggtaagtgtgcgggggcggctaccaagtgatgggggcggcgaggaagactatgag
gacgatgaaggcggggaggtccgcaggagtaagatgagaagttttttcctgcgtgggagg
ttgaggaagtcttcagacacacgctcaagcacgtcgctgggctccgagagcagcgagtcc
tcatcgcggggcggcagcctcagcccgacggcaggaatcagcgtggtggtctcagatctg
tccaactctccgagtaacagcagcaacctgactgcagacagcagtccagaacacacagtg
gctccctcaccacaggtttctcctgtcagacaaatgatgtacgacatcagcttaccagtg
cctcattctgtgacgtcagagaacgacacccctattctgcttccttcagtgtgcgtgaat
gggaatccggtggaaacgtctcctcttactcaccaccctccgtcactcatactacagcaa
cctcaacgagagtcaaccaaaccagtaactcagtcaggtcaaccacaggcaaccaagctg
ccagttaagcctcagaaaacccaatcaattgaacagaaatcccaagaaacccggctgtcc
gagtcaaagccaaggcctgagccccagctcccagccctcggggtgcttcagaagggctct
tctctctctctctccctacagaacatctctcgccgtagggaagaaaagcaaaacggcggc
cccgtggatggccgtcgctggtcgttcgataaacccggagaggaagaaaaagctgccatc
gtagcagcattagagcatgctggaagagttacggatgaggcggtgatggaaacagtgata
cctgctggagagacagagactcagagcaagaaaaggaggggcctgttttcacacgggaga
ggtgattcggctgggaaagggccaatcatgagtaaagaggaagcagaacatgctcaacca
cttgtagaagtcaaacacaaaggatggttcggctccaaggactcttacagtaaacccagc
cccctggtgtctccttggtcactctcaagtcccattgcacccttgaactttaatgaccct
tcacagagtatggctgacaaacacgctaatcccttcacttctctcccacccttttctgaa
gccaatcccttcctcccacatgcacagcagaatcctttttttcaggagcttcattctgct
gctccttcaactcctgatgtgccctctctctttagctcacagtcttccggtaatgccacc
ccagatttgctaaggattggaaacaaaaaaggaccttcccaaattgatttttcatttgat
cctttaatttctcacttcgagggaccgacagaaaaggatgaatttgaaaattttgctgag
gatagacttaagtcttcagatgagatgaatgaaacaaagaatttggttacaccccctcct
ctccttctgaaaacaaataatcaagagcccttaggtgctttgggtggcttaatggtgtca
gatacaaatgatctaactgatttagggcaaactgcttcagcaagtactgtagaaacaccc
aaggaaagtgctgcagacacaattcaagtttcaggaagtgatgttaattatatttgctct
agttctgacaaacctgacccaaccgatcacggggcacatggcttcccagaatttgacatg
aatttatccaaaatctccttgcctgaaaattccagtttagatttttctgaactgaatata
cttgcatgcccttatcctgcactgtcacctcgatccacgaatgaagaccgttctgacgcc
gcaactcttaaagaccaaccaaagatgtccctaaactcacaaagtgccaaatcagacgcc
acagagccatcattatcagaagcagacactgttgaccttcttcatgatgtctgcattgag
ttctcagagggggtgtttgtgaatcctgaaacatcacagaggcccgaagcacctgagtct
gctacagatattgagtctgtgatagtccatgaggatcctttgccattcagctcaggtgac
aacctggaacagtccactgtgaaatctgattccataggtggagttctagaccaccagtct
attgagccctgtctttctccaaagagtgacataattccaggtaatacaatacaatcggat
gaagaattttggagatcagatgcctcactcattcaaactgtggcagtaagtggaaagtcc
cttgaaaccactgagctttcaagaagccaggttcaattagcaccgagttcccttctgtca
gctactttgccagtgaagaatggagagaaaactgatgcagttatggacaccatgattcag
aacgagtcaggagatggtctcttagagggtgggaatagtaaagatgtctgttctgaaatc
gaagagtctgttcctgagaacctatttgatggtcattcctttccaaggctgtcttatgac
atgcaggaggacaaacagaaggtcagtgaattgcccacaagtccatgcaagaatgactta
acgggcaatctactcgccagcatcagtgaagagcaagaaataacaaattctaatgggacc
acacatcctgtaagacatatccttcccaccactggaattagaacagggacagatccaaac
tttgtgctctcacctggcagtgtgctcctccacagcatgtacaagagtgcagaatcagac
cagtacattacttgtgtatctcagcaggattcagtttcccagagtttagagctcacacag
gatgtgaaacccaaacataattggtctgtagaggacactttgccaaaccatatctctaat
gctatgccaaaagttgacacatctgtaaatgttgtaccagaaatggcttgtaagcaaaat
caggtcattgaagaaaacattaaaccatttcaagaagtcttgccaaagccagaatcccct
caggatgttcaaccaagaaattgcttattggacctccagccagaaacgcatacctttaca
ccaaaattagccccctcatgcaatacatcatctgagaacatgataaagtctgattttgat
aaagcaatggtacagtgcaacccttcaggggacaatgttgaaaaatatgacttttccaaa
gatatgatgccaattgttataacatcagatatgatagcagaacttgaggctcagcttgca
ccattagatacagaaacatgtctggtaaataactgtaaaacctgcccaaccaaacaaaac
gattcccaagaactgcaaaaagacgaatcccataatattaaatctgttggcattttatcg
gagggcaacctacatttagcccagctgaatgaacctaacgtgtttgcatctgattgtgga
ttagaacaaacctccagtatcacacaggacctagtcataactgattctggactggaaaac
atctttctaccccagccaactgaaacacaccttctttgtactagcacaaggccagtcgca
aaccttgaatttgcagagagtctagacagaaatgctgaaatgtggacaacccctgctgat
caagattcagaggcacctgtcttatttccagtgagctggcccaatttaccccagccatca
gcaccttcactctgtgaacagccaacgctggcttcaaggcatgaccacacccttaacttt
acatcttctttgttcgacctttcacctgtagcttcctcaacaccacatatagcagtattc
ccatttcccataattccccctaccacagcagagtcattaccacgtccaggacatgctcct
cttcctactgtgcagcctgtgaattctacatcatacaatccttttatccaggataaacca
caggcatttgatcatcagagcagtccacacccagtgaagccattgacaccccctgatgag
aaaaggtcagagggtcgctccgtactagagaagcttaaatccaccatccactcaggacga
agtcaccactccgatcaggatgctgacaagaagccactagtggagggaggaggctcatac
tatcacctgaaccacggtgatctggttaaattgctgatccagcgagataccgagcttagg
caggagcgggaggactacgagaagcgaagggcgctgctggagaaacgtgagacggagcta
aaaaagatgaagcttctgatccgagatctagaggattacatcgacacgctgctcgtacgc
atcatggagcagacccccaccctgctgcaggtccgcaacaagatgaaatga
DBGET
integrated database retrieval system
