Pimephales promelas (fathead minnow): 120479803
Help
Entry
120479803 CDS
T08155
Symbol
mlh1
Name
(RefSeq) DNA mismatch repair protein Mlh1
KO
K08734
DNA mismatch repair protein MLH1
Organism
pprm
Pimephales promelas (fathead minnow)
Pathway
pprm03430
Mismatch repair
pprm03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
pprm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
120479803 (mlh1)
03460 Fanconi anemia pathway
120479803 (mlh1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pprm03400
]
120479803 (mlh1)
DNA repair and recombination proteins [BR:
pprm03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
MutL homologs
120479803 (mlh1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Mlh1_C
DNA_mis_repair
HATPase_c_3
HATPase_c
Motif
Other DBs
NCBI-GeneID:
120479803
NCBI-ProteinID:
XP_039528515
LinkDB
All DBs
Position
Unknown
AA seq
710 aa
AA seq
DB search
MAAVIRRLDETVVNRIAAGEIIQRPANAIKEMMENCLDAKATNIQITVKEGGLKLILIQD
NGSGIRKDDMEIVCERFTTSKLQSFEDLASIATYGFRGEALASISHVAHVTITTKTADGK
CAYRANYCDGKLKSPPKPCAGNQGTLISVEDLFYNVSTRRKALKSPSEEYSRIIEVVSRY
AIHNSGKSFAVKKQGEMVADVKTQMNASVLDNIRVVFGVAVSRELIEVECEDQKLAFKMK
GYISNANYSVKKCILILFINHRLVESSALKKAIETVYTAYLPKNTHPFLYLSLEIAPQNI
DVNVHPTKHEVHFLHEDSITESIQKHIESKLLGSNSSRTYFTQTLLPGLSASASVAKASS
SADSQERVYAHQMVRTDCKAQKLDAFLQPSGSQCRPEKASSPPAAELDDSELLNAVDLEP
CASEDLQTDSPPNEAPLRKRPHVEEVKDDLTAASLPRRRVIKLTSVTQLREEIEQQTHKG
LQELLQKHSFVGSVSPQWTLVQHQTKLYLLNTTKLSQQLFYQILIYDFGNFGVLRLSNPV
PLYDLAMLALDSEESGWTDEDGPKEGLAQYIVDFLKQKTEMLEEYFSLEIDGKGNLTGLP
MLLDNYTPAMEGLPMFILRLATEVNWDREKDCFRDFSIECSHFYSIRKRYTLEPDAEEPQ
DAEMSWQWKVEHVLFKALRSLFSPPKHFSEDGSVLQIASLPDLYKVFERC
NT seq
2133 nt
NT seq
+upstream
nt +downstream
nt
atggcggcagtaatccgcagactcgacgagactgtagtgaaccgcatcgcagcaggagag
atcatccagcggcctgccaatgccatcaaagagatgatggagaactgtttggatgcaaag
gccacaaatatccagataacagtgaaagaaggaggactgaagctcatcctcattcaggac
aatggcagtggcatcaggaaagatgatatggaaatagtttgcgagcgttttacgaccagc
aagcttcagtcttttgaggacttggcatcaattgcaacatatggattcagaggagaggct
cttgccagtataagtcatgtagcacatgtcacaatcactacaaaaacagctgatggaaaa
tgtgcctacagggctaattactgtgacgggaagctgaaatctccacccaaaccctgcgct
ggaaaccagggaacgctgatttctgtagaggatctgttttataatgtgtccacccgacgg
aaagccctgaagagccccagtgaggaatactctagaatcattgaggttgtgagcagatac
gccattcacaactctgggaaaagttttgctgtcaagaagcaaggcgagatggttgcagat
gtgaagactcaaatgaatgcctctgtgctggacaacattcgtgtggtgtttggtgtagct
gttagcagggagctgattgaagttgagtgtgaggatcagaaactcgcttttaaaatgaag
ggctacatctccaatgccaactactctgtcaagaaatgcatccttattctttttatcaac
catcgcttggtggagtctagtgccttgaagaaagctatcgagactgtatacactgcttat
cttcccaaaaacactcatccttttctttatctgagtctagagattgctcctcagaacatt
gacgtgaacgttcaccccaccaagcacgaggtgcacttcctacacgaggacagcatcacc
gagagcattcagaaacacattgagagtaaactgctcggctctaactcctcacgcacatac
ttcacacagactctgcttccaggactctctgcgtccgccagcgtggccaaagcctcttct
tcagcagactcccaggagcgcgtgtacgcccatcagatggtccgcactgactgcaaagcc
cagaagctggatgcgtttctccagccgtcaggctctcagtgcaggccagagaaagcctcc
agcccccccgccgctgagctggacgactccgagcttctgaatgctgttgatctggagcca
tgcgcctcagaagatctacagacagactctcctcctaatgaagcaccactgaggaaaagg
cctcatgtcgaggaggtgaaggacgatttgacggccgcctctcttcccaggagacgcgtc
attaaactgaccagcgttacgcagcttcgggaggaaattgagcagcaaactcacaaaggt
ttacaggagctgcttcagaaacactcgtttgtgggttcagtcagtcctcagtggactcta
gtgcagcatcagactaaactctacctgctcaatacaaccaaactcagtcagcagctgttt
tatcaaattttgatctacgattttggtaactttggagtccttcgattgtcgaatccagtt
ccgctctatgatttggccatgttggctctggattcagaggagagcggatggacggatgag
gacggaccaaaagaaggactggcccagtatattgtggatttccttaagcagaaaacagaa
atgctggaagagtacttttccctggaaatagatggaaaagggaacctgactggtctgcca
atgctgcttgataattacactcctgccatggagggacttccgatgttcattctgcgttta
gccactgaggtgaactgggatcgagagaaggattgtttccgggacttcagcatagaatgc
agtcacttctattccataaggaaacgctacacactggagccggatgcagaagagccacag
gatgcagagatgagctggcagtggaaggtggagcatgtgcttttcaaagctcttcgatct
ctcttcagcccgccgaaacacttcagtgaggatggcagcgttctccagatcgccagcctg
cctgacctctacaaagtgtttgaaagatgctga
DBGET
integrated database retrieval system
