Pimephales promelas (fathead minnow): 120479817
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Entry
120479817 CDS
T08155
Symbol
srbd1
Name
(RefSeq) S1 RNA-binding domain-containing protein 1 isoform X1
Organism
pprm
Pimephales promelas (fathead minnow)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Tex_YqgF
HHH_3
Tex_N
S1
Tex_central_region
HHH_9
HHH_7
YqgF
S1_RRP5
LarA_C
Motif
Other DBs
NCBI-GeneID:
120479817
NCBI-ProteinID:
XP_039528536
LinkDB
All DBs
Position
Unknown
AA seq
982 aa
AA seq
DB search
MLRRTRTAKVYKEPETEDDSDDITGNQKDGSEELDEWLPNLNEGKTKGRCQGGTDETTEK
KKVSKRVAKPKEPKPKEPKPKAERKPRAPRVPKAKKEKTNTENQTEDAVLPKPESHQHVP
IKEERLSINLSREFNNNAGVPRDMLDEGPSSSQHFPKMKKEEPDDSFTFDEPAQKKQKTT
NMPQGRPIKLKPGSSCVEDLQMNWDPIQVLANKTGVEQWVCMNIAQLLQEENTIPFMVRY
RKELINHMDADAVRDVQLALEELRSVAKKSRSVAQTLKKEGVLTLDLEMVLKNCTTADEI
DHVYGPYKKGSKLSKARRAKELGLEPVALALLQAPQTLDLHSSILPNTKGLSTLDEVATG
VQEILADMIAKDKETLTHVQSLCDRSNVTIHSSVSKTALKEQQPQQGNQKSKPKDIANFS
LYTDFTCDVHRIQHHQTLAINRGENLKILTVKVNIPDWVKNDFCRWCVNVRWRPQGFAQP
ELMTILKNACEDSYKRFILPFLSRGYRSKLTASAEKESIAMFVRNLRQRLLMCPVRGKVI
MGVDPGFHHGCKLAILSPTSQILHTDVVYLHGSAKYKEAEKLRHLMFKHSCQTIVIGNGK
ACRETEAFFTDLIKRRFFNPIDVSYCITDEAGASIYSVSPEAVKEMPDMDPNLRSAVSIG
RRVQDPLAELIKIDPKHIGIGTYQHDVSQSLLRAALDGVVQECVSFVGVDINICSETLMR
HIAGLNAGRARNIMEWKEKNGPFLNREQLKLVKGLGPKSFQQCAGFIRINPETIPSICSK
GNEDLEVQKQTAKKRKVKGSDSTSGFNPLDQTCIHPESYSIAFRFLSQIGGSLDQMGSAV
LRQSVESSVQSSGLDVLAKSLDTTPETLQLIVDGLIQPPGFDIRQDFEQADFKREIVSMN
DLHDGMVLTGRVTNTALFGAFVDIGVGRSGLIPNRFITPEKLPVDQRRRSLALGPGERVE
VRVMNVDLQRNRISLDLIRVLR
NT seq
2949 nt
NT seq
+upstream
nt +downstream
nt
atgcttcgaagaacaagaacagcaaaggtgtataaagagccagagactgaggatgattct
gatgacataacaggcaatcagaaagatggcagtgaggagttagatgaatggctgccaaat
ttaaatgaaggcaaaactaaaggaagatgccaggggggaacagatgaaaccactgaaaag
aaaaaagtgagcaagagggtggccaaacctaaagagccaaaacctaaagagccaaaacct
aaagcggagaggaagccaagagctccacgagttcctaaagcgaagaaggagaagactaat
acagagaatcaaactgaggatgcagttctaccgaagcctgaatcacaccagcatgtgcca
atcaaggaagagaggttgtccatcaacttgagcagggagttcaataataatgcaggtgtc
ccaagagatatgcttgatgagggtccatcctccagccaacatttccccaagatgaaaaaa
gaggaaccagatgacagcttcacctttgatgaacctgctcagaagaagcagaagaccaca
aacatgccccagggaagacctataaaactcaaaccgggcagttcctgtgtggaagactta
cagatgaattgggatcccattcaggttcttgctaacaaaacgggtgtggagcagtgggtg
tgtatgaacattgcacagctcctccaggaggagaacactattcccttcatggtgcgctat
agaaaggagctgattaaccatatggatgcagatgctgttcgagatgtgcagctggctctt
gaagagttacggtcagttgccaagaagagcagatctgtggctcaaacactaaagaaggaa
ggagttcttactttagacctggaaatggttttaaagaactgcacaacagctgatgaaata
gaccatgtgtatggcccctataaaaagggcagtaagctgtccaaggccaggcgagctaag
gagctaggactggaacctgttgccctggctctgcttcaggctcctcagacactggatctg
cactcctcaatcctgcccaacactaaggggttgtcgaccctggatgaggtggccacgggt
gtgcaggagatcctggcagatatgattgcaaaggacaaagagactctcacccatgtccag
tcactgtgtgacagaagtaacgtgaccattcactcatcagtgtctaaaacagccctgaaa
gaacagcagccacagcaaggaaatcagaaaagcaaaccaaaggacattgccaatttcagc
ctgtatactgacttcacctgcgacgtccatcgtatccagcatcatcagacgttagccatt
aaccgtggggagaatctgaagattctgacagtgaaggtcaacatccccgactgggtgaag
aatgacttctgtaggtggtgcgtcaacgtcagatggaggccacagggatttgcacagcca
gaactgatgacgattttgaagaatgcttgtgaagattcctacaaaagattcattctgccc
tttctcagtcgaggctacaggtctaagttgactgctagtgcagaaaaagagtccattgcc
atgtttgttcgtaatctgcgtcagcgtcttctgatgtgtcctgtgcgtgggaaagtcatc
atgggagtggacccagggtttcaccatggctgcaaactggcaatcctgtccccaaccagt
cagatcctgcacacagatgtggtgtacctccatggctctgctaaatacaaagaggcagaa
aaactgcgccatcttatgttcaaacacagctgtcaaactattgtcataggaaatggaaaa
gcatgcagggagactgaagccttctttacagacctaattaaacgccgctttttcaacccc
atagatgtttcctactgcataacagatgaagcaggagcgtccatctacagtgtgagtcct
gaagctgttaaagagatgccagacatggatcccaacctaaggagtgcagtgtctattggg
aggcgtgttcaggaccctttagcagagcttattaaaattgaccccaaacatattggtatt
ggcacctaccagcacgacgtgtcgcagagtttgctgagggcagcgttggacggggtggtg
caggagtgtgtgagcttcgtgggagtggacatcaacatctgttcagagacgctgatgagg
cacatagcaggtctgaatgcagggcgagcacgcaatattatggagtggaaggaaaagaac
ggaccttttctcaatagagagcagctaaaactggtcaaaggcctcggccctaagagcttt
cagcagtgtgccggcttcatcaggatcaaccctgagacaatacccagtatctgctctaag
gggaacgaagaccttgaggttcagaaacagacagctaagaagagaaaagtcaagggctct
gatagcacatctgggtttaaccctctggaccaaacctgcatccaccctgaatcatacagc
atcgctttcaggttcttgtctcaaatagggggcagtttggatcagatgggcagtgctgtt
ctcaggcagagtgttgagagcagtgttcagagcagtggtctggatgtcttggccaaatct
ctggacaccacacctgaaactctacagctcattgtggatggactcattcagcctcctggc
tttgacattcgtcaggattttgagcaggcagacttcaagcgagaaattgtgtccatgaat
gacctgcatgatggcatggtgctgacaggccgtgtaacaaacactgctttatttggagcc
tttgtggacatcggagtgggccgttctggtctcatcccaaaccgttttatcacgccggaa
aaacttcctgttgaccagaggcgaagaagcctagctctcggaccaggtgagcgggtagag
gtacgggtcatgaatgtggatcttcagaggaatcggatcagtctagacctcattagggtt
ctcagatag
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