Pimephales promelas (fathead minnow): 120479867
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Entry
120479867 CDS
T08155
Symbol
gabra2a
Name
(RefSeq) gamma-aminobutyric acid receptor subunit alpha-2 isoform X1
KO
K05175
gamma-aminobutyric acid receptor subunit alpha
Organism
pprm
Pimephales promelas (fathead minnow)
Pathway
pprm04080
Neuroactive ligand-receptor interaction
pprm04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
pprm00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
120479867 (gabra2a)
04082 Neuroactive ligand signaling
120479867 (gabra2a)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
pprm04040
]
120479867 (gabra2a)
Ion channels [BR:
pprm04040
]
Ligand-gated channels
GABA-A
120479867 (gabra2a)
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SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Neur_chan_LBD
Neur_chan_memb
CytochromB561_N
Motif
Other DBs
NCBI-GeneID:
120479867
NCBI-ProteinID:
XP_039528628
LinkDB
All DBs
Position
Unknown
AA seq
451 aa
AA seq
DB search
MNQRWGHSNGFLTNLFLLVLWRSCSEAEVSGSDAFKNNITLFTRILDRLLDGYDNRLRPG
LGDRVTEVKTDIYVTSFGPVSDTDMEYTVDVFFRQRWTDERLKFHGPMNILRLNNLMASK
IWTPDTFFHNGKKSVAHNMTMPNKLLRIMENGTLLYTMRLTVQAECPMHLEDFPMDFHSC
PLKFGSYAYTLTEVTYVWTRNATLSVEVAPDGSRLNQYDLMGQTVAKETIKSSTGEYTVM
TAHFHLKRKIGYFVIQTYLPCIMTVILSQVSFWLNRESVPARTVFGVTTVLTMTTLSISA
RNSLPKVAYATAMDWFIAVCYAFVFSALIEFATVNYFTKRGWAWDGKSIVSDKKKEVSVM
KKNNAYAVAVANYAPHITKDSALPTVSKSATAEPSKAQPVAKEAKKTFNSVSKIDRMSRI
IFPVLFGSFNLVYWATYLNREPVIKNMVPSL
NT seq
1356 nt
NT seq
+upstream
nt +downstream
nt
atgaatcagcgttggggtcattcgaatggatttctaaccaacctgtttctgctggtttta
tggcgttcatgttctgaggcagaagtatctggctcagacgcctttaaaaacaacataacc
ctcttcacgcgaatattggaccggttactcgatggttacgacaacagactgagacctggt
ctgggagatcgagtgacagaggtgaagactgatatctatgtgaccagttttgggccagtg
tcagatacagacatggaatacacagtggatgtgtttttccgtcagcgctggacagacgag
cggctaaagtttcacgggccaatgaacatcctgcgtctcaacaacctgatggccagtaaa
atctggaccccagacactttctttcacaacggcaagaaatctgtggctcacaacatgacc
atgcctaataaactgctgcgcatcatggagaacggcactctactgtacaccatgaggttg
acagtgcaagccgaatgcccaatgcatcttgaggactttccaatggatttccattcctgt
cccctgaaatttggcagctatgcttacactttgacagaggtgacgtatgtttggacacgc
aatgccaccttatcggtggaagtagctccggatggatctagacttaaccagtatgactta
atgggacagactgttgcaaaggaaaccatcaagtccagtactggtgaatatacagtgatg
actgcacatttccatctaaagaggaagattggatactttgtgatccagacatatctgcct
tgcataatgaccgtcatcctatcccaagtctctttttggctcaaccgagagtccgtccct
gcacgcacagtttttggtgtgactacagtgctaacgatgaccactctgagcatcagcgct
cgaaactctttaccaaaggtggcctacgccacagccatggactggtttattgctgtgtgc
tacgcgtttgttttctcagctctcatcgagttcgccactgtaaactacttcaccaagcgc
ggctgggcctgggatggaaagagcattgtcagtgataagaaaaaggaggtgtctgttatg
aaaaagaataacgcatatgcagtcgctgtggcaaactacgcgccccatattacgaaggac
tcggctctgcccaccgtctctaagagcgccacagcggagcccagtaaagctcaaccggtg
gctaaagaagcaaagaagaccttcaacagtgtcagcaagattgaccgcatgtcccgcatc
atctttccggtgctttttggcagctttaacttggtttactgggccacatacctcaacaga
gaacctgttattaagaacatggtgccctccctgtga
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