Pimephales promelas (fathead minnow): 120479869
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Entry
120479869 CDS
T08155
Name
(RefSeq) LOW QUALITY PROTEIN: uncharacterized protein LOC120479869
KO
K04469
nuclear factor of kappa light polypeptide gene enhancer in B-cells 2
Organism
pprm
Pimephales promelas (fathead minnow)
Pathway
pprm04010
MAPK signaling pathway
pprm04625
C-type lectin receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
pprm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pprm03000
]
120479869
Transcription factors [BR:
pprm03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
RHR (Rel homology region) Rel/Ankyrin
120479869
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RHD_DNA_bind
SHLD2_OB1
SHLD2_C
Ank_2
RHD_dimer
OB_SHLD2_2nd
Ank
Ank_4
Ank_3
Ank_5
Death
Motif
Other DBs
NCBI-GeneID:
120479869
NCBI-ProteinID:
XP_039528634
LinkDB
All DBs
Position
Unknown
AA seq
1688 aa
AA seq
DB search
MANNPKIHVFWGAPCPQAPALEVQEKGVQHWKTVDLTWSQGRLIPKDTREVQTDDECDET
TSAVISGRLESAGTTERIAESTEDKTETSEDDSTPSGCGCFQPNAESVEEEELCPVLLTE
YLDSCFSCPQTSLIRQSKDVKPTSPVSTETEYLSTWTKSQALLLRSRVARCPTSGFLEGF
LLGSPHTPPKQVASASISSPELYSPMVSPEERGLGGTLQSSGEWHNDSLSQRQQERGVIL
EITSDGILCSQGNAVAEKPADHEEVGLNVDSATTAAHTSPSPTTSKKMKLSQTRSKTKET
TEQRVRSASPLCGPTTLLARCKTHGVRYAILVAVVHPCHLKEVKVKTGVSAGSSVPLATL
IVTDQSDVEMKVVLWRTSAFWALTVYPGDILLITDVKVHIDKWKTETVLQSSFTSKLLNL
GQVTGERIPPDPQNLNYNTLRMLCTHLCEKRPLLLSLPPHKPQDLDSIPFIRLGALRPDT
LVHALLRVKHRKLITAWRDEVEGISRTGGVLKAILTVEQGDGHQGAVVLWGAALSWLQRL
DRNKYAVWEFRMLLVRQDVTSGLLELHSTPWGTCQPLFPDDSRCKEFYNTVHSQRTASSF
EIDLNTLLSQKYSGDVELKIKITAFQFQSSPSQDASLLIDANTPMERILDVVSGDITFAG
CGQCSAELETDENGIYRPCYPCLPHTGVRHYYRPVVLTVRDGDDQICVQVPPAIVQKILL
NTPPDRLHKTIAPASEVRFIQLNXRRIKTTRELANITVKQVCREFRVSSESDDPANRMAG
ALRMDDTQYQMKFDNESLQFMVDLPYLHEPFEVKPEPFVTETVHGPYLQIIEEPKQRGFR
FRYECEGPSHGGLPGASSERNRRTYPTVKVSNYVGHARVEVQLVTHTDPPRVHAHSLVGR
QCNDNGICSIDVGPNDLTAQFSNLGILHVTKRGVIEVLTKRLREEKRRTKEPGYKFSDAE
EQAIVQEAKELGKNMDLNIVRLKFTAYLQDSNGSFTRALTSAVSNPIYDSKSPNASNLKI
SRMDKTSGSVLGGEEVFLLCDKVQKDDIDIRFYEEEDDAGWEAFGDFSPTDVHKQYAIVF
KTPPYRCTDITRPVTVFLQLKRKKGGDCSEPKQFTYIPHNQDKEEVQRKRMKALPQPYDH
WRGGPQGGAGAFGGPGSGTGGGGMGGGFQFNHTMDGSGFFGGGGGFAGGPQMSGSTPQSD
GSQNQPTNKQTQSGSPVQQQLIQIAAALQNRATLTAKCTARALLQYCSTGDVRPLLVLQR
HLCGVQDENGDTPLHLAIIHQQPAVVQQLIQALNNTPQQKFINKLNHLSQAPLHLAVITK
QPKLVEMLMRTGADPSLLDREGRTALHLAAHTGDEAVLRVVLSLLGERHVDLINSADFSG
QYPVHLAVKKDGERCLQLLVEKGAMINMPEQKSGCTPLHLAVRENLLKLACNLITELKAD
VNICTYGGNSPLHFAASQGSPPLCSMLIAAGADKRMENDEPLFLSLSSSDEDDESEKNDS
NNQLPDDMVQQVRFMSISSERGAFNPRKRPAAGHTPFDLAKCQKVRDLLDGRKGPKSSSL
APKRTKISTDEVNQGLESEVLMKLCGILIEDHVPWRELAEKLGMLTLTHLFQESASPCKK
LLENYQLSGGPVDGLVEALQSMGVSKGVRLLTASQPREDKQSSDSKEDSGFGSQSIGEQM
GNPAVGNH
NT seq
5067 nt
NT seq
+upstream
nt +downstream
nt
atggcaaacaatccaaagattcatgtgttttggggtgccccatgtccccaagcccctgct
ttagaggtacaggagaaaggagtccagcactggaagacagtggacctcacttggagtcaa
ggcaggttgattcccaaggacaccagagaggtccaaacagacgatgaatgtgacgagacg
acgagtgcagtgattagtggtagactggagtctgctggtaccactgagagaatcgctgag
agtacagaggacaaaaccgaaacatccgaggatgacagtactccatcgggctgtgggtgc
tttcaaccaaatgcagagtccgttgaagaagaggagttgtgtcctgtgttgttgacagaa
tacctagatagttgtttctcctgcccgcagactagtttaattagacagagcaaagacgtg
aagcctacatcgcctgtttccacagagactgagtatctgagtacatggacaaagtctcaa
gccttgcttcttcgaagtagagtggctcgatgtccaacttctggctttcttgaaggtttc
cttcttggttctccacatactccacctaaacaagtggcctcagcctccataagttctcca
gaattgtacagtcctatggtcagccctgaagagaggggcttgggaggaaccttgcaaagc
tcaggagagtggcataatgacagtctaagccaaagacagcaggagaggggggtgattctg
gaaatcacatctgatggcatcctctgctctcaaggcaatgctgtcgctgaaaaacctgca
gatcatgaagaagtcgggctgaatgttgactcagcgactacagctgcacatacttcaccc
agtcccactacttctaaaaagatgaagttgtctcagactagaagtaaaactaaagaaaca
acagagcagagggtaagatctgccagccctctctgtggtcctacaaccctgctggccagg
tgtaagacccatggtgtacgatacgccatcttagttgctgtggtgcacccatgccactta
aaagaggtcaaagtgaaaactggagtttcggctggttccagtgtacctctagcaacgctg
atcgtcaccgaccaatcggatgtggagatgaaggtggttctatggcggacatctgctttc
tgggctctgactgtatatccaggagatattctgctaattacagatgtgaaagtgcacata
gacaagtggaagactgagactgtcctgcagtcctccttcaccagtaagctgctgaatctg
ggacaggtcacgggggaacgtattccacctgacccacagaatttgaactataatacattg
agaatgctgtgtactcatctgtgtgagaagcgtcccctgctgctgtctctgcctcctcac
aaacctcaggatttggactccatccccttcatccgtcttggagcgttacgtcctgacaca
ttggttcatgctttgcttagggttaaacacaggaagttaattacagcctggcgtgatgag
gtggaggggatatccagaacaggaggtgtattgaaagccattttgactgtggagcaagga
gatggccaccaaggggctgtcgtactttggggagctgcactctcttggctgcagcgtttg
gacagaaacaaatatgcagtgtgggagttcaggatgctgctagtcagacaggatgtgacc
tcaggtttgctcgagctgcattctactccatggggcacctgtcagcctctctttcctgat
gacagtcgatgtaaggagttttacaacacggtccactcacagaggaccgctagcagcttt
gagatagatctcaacacactactgtcccagaaatactccggtgatgtagagctgaaaatt
aaaatcacagcgttccagttccagagcagtccatctcaggatgcctcgctgttaatagat
gccaatacgcccatggagaggatcttggacgtagtctctggtgacatcacttttgctgga
tgtgggcagtgttctgcagaactggaaactgatgagaacggcatatatagaccctgctac
ccttgtctaccacacacaggagtgcgtcactactataggccagtagttttaactgtgaga
gacggagatgatcaaatctgtgtgcaagtccctcctgctatagtgcagaagatccttctg
aacactcctcctgataggctacataagaccatagccccagcatcagaggtgaggttcatc
cagttaaattgacgtcgaataaaaactacacgagaattagctaacatcacagttaaacaa
gtctgtcgggagttcagagtctcttcggaatcggatgaccctgctaacagaatggctgga
gcactgaggatggatgatacacagtatcaaatgaagtttgacaatgagtctttacagttc
atggtggaccttccatatctgcatgaaccgtttgaggtgaagcctgaaccatttgtgaca
gaaacagttcatgggccttatctacagataattgaggagccaaagcagaggggattcaga
tttcgttatgaatgtgagggcccatcccacggtggtctgccaggggcctccagtgagagg
aacagaaggacatatcccacagtaaaggtgtcaaactacgtgggtcatgctcgcgtggag
gttcagctagtgacgcacacagacccccctcgcgttcatgcacacagtcttgtgggtcgc
caatgtaatgacaacgggatatgctccattgatgtcgggcctaatgatctcacagcacaa
ttcagtaatttaggcatcctccatgttactaagagaggagtgattgaagttttaacgaaa
aggctgagagaagagaagagaaggacgaaagagcctggatataaatttagtgatgcagag
gaacaggctattgtgcaagaagccaaagaattgggcaaaaacatggacctaaacattgta
agattaaagttcactgcttaccttcaggacagcaatgggagtttcacaagagccttgacg
tctgctgtttcaaatcccatctatgatagcaaatcaccaaatgcttcaaatctgaagatc
tccagaatggataaaacctctggatcagtgctgggaggagaagaggtctttctgctctgt
gataaagttcaaaaagatgatattgacattcgtttttatgaggaggaagatgatgccgga
tgggaggcatttggagacttctcccccactgacgtccacaagcagtatgccatcgtgttt
aagacaccaccgtaccgctgcacagatatcacacggcctgtcaccgtgttcctgcagctc
aagagaaagaagggaggcgactgcagcgaacccaagcagttcacatatattccacacaat
caagacaaagaagaggttcagaggaagaggatgaaggcacttcctcagccttatgatcac
tggcggggaggacctcaaggaggagcaggggcctttggaggtcctggatctggaacaggt
ggaggaggaatgggaggaggatttcaatttaatcatacaatggatggttcagggtttttt
ggtggtggtggtggatttgctggaggtccacagatgtcaggctctaccccacagtctgat
ggatctcagaatcaaccaactaacaaacaaactcagtctggttctccagtgcaacagcag
ctcattcagattgccgcagctctgcagaatcgcgccactttgacagccaagtgcactgct
cgtgctttgttgcagtactgcagtacaggggatgtgcgtcccctgctggttttgcagaga
catctgtgtggagtgcaagatgagaacggagacacgcctctgcacttggccattatccat
cagcaacccgctgtcgtccaacagcttattcaggccctgaacaacaccccacagcagaag
ttcatcaacaaactcaaccacctcagtcaggctccattgcatctggccgtgatcacaaag
cagcccaagttagtggagatgctgatgagaacgggggcagacccgagcctgctggaccga
gagggcaggacagcgcttcacttggccgcccacaccggcgatgaggctgtactacgagtg
gtcctgagcctgctgggagagcgccatgtcgatttaataaactctgctgacttctcaggt
caatatccagtccatctcgctgtaaagaaagatggagagcgctgccttcaattgttagtg
gagaaaggagcaatgattaacatgccagagcagaaaagtggctgtacacctctacatctg
gcagtgagggagaacctgttaaaactggcctgtaatcttattactgagctaaaggctgat
gtgaatatatgtacctacgggggcaacagtcctcttcactttgctgccagtcaaggctca
ccacctctctgctccatgctgatagctgcaggtgctgataaacgtatggagaacgatgag
cctcttttcctgagtttatcttcctctgatgaagatgacgagagtgagaagaatgattcc
aataatcagcttccagatgacatggttcagcaagttcgattcatgtcgatatcatcagag
aggggagcatttaacccacgcaagagacctgctgcgggacacacgccatttgacctggct
aaatgtcaaaaggttagagatctattagatggaaggaaaggccccaagtctagttcactc
gcccccaagaggaccaaaataagcactgacgaagtgaaccagggtttagaaagcgaggtg
cttatgaaactgtgtggtattcttattgaagaccatgtgccctggagagagctggcggaa
aaactgggcatgctcacactcactcacctgttccaggagagtgcctcgccctgcaagaag
cttctcgagaactatcagttgagtggtggtcctgtggacggcctggtggaggcgctgcag
tctatgggtgtgagtaaaggagtgagacttctgacagccagccaacccagagaggacaaa
cagagctcggattctaaagaggacagtggctttgggagtcagtccattggagaacagatg
ggaaatcctgcagtgggcaatcactga
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integrated database retrieval system
