Pimephales promelas (fathead minnow): 120479981
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Entry
120479981 CDS
T08155
Name
(RefSeq) dynein intermediate chain 3, ciliary-like isoform X1
KO
K11143
dynein axonemal intermediate chain 2
Organism
pprm
Pimephales promelas (fathead minnow)
Pathway
pprm04814
Motor proteins
Brite
KEGG Orthology (KO) [BR:
pprm00001
]
09140 Cellular Processes
09142 Cell motility
04814 Motor proteins
120479981
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
pprm03037
]
120479981
04812 Cytoskeleton proteins [BR:
pprm04812
]
120479981
Cilium and associated proteins [BR:
pprm03037
]
Motile cilia and associated proteins
Dynein arm
120479981
Cytoskeleton proteins [BR:
pprm04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Dyneins
120479981
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40_Prp19
Beta-prop_RIG_2nd
WD40_CDC20-Fz
WD40
WDR55
Beta-prop_EIPR1
Beta-prop_TEP1_2nd
Beta-prop_EML_2
WD40_WDHD1_1st
Beta-prop_EML
MIOS_WD40
WD40_RFWD3
Beta-prop_SPT8
Motif
Other DBs
NCBI-GeneID:
120479981
NCBI-ProteinID:
XP_039528790
LinkDB
All DBs
Position
Unknown
AA seq
605 aa
AA seq
DB search
MEIVYVYTKKRSEFGRQCNFSDRPAELHVDILPDPSLAANFTVRDPCNATMQCAKEMSEH
EVNTERFESESRGINHVEGGWPKDLNPEDVEATIRYRKKVEKDEHYQNTIMQIAGLMEHC
SKQNNATDIYQDFFVDEVEEEVVEESEEEPSAKTINVFRDPNEVKRTATSLSWHPDGNHK
LAVAYSSLEFQKAPNNMSFDSYIWDIENHNKPEMTLKPVCPLVCLEYNPKDSHILVGGGY
NGQIAYWDTRKGSQPVEMSTIEHSHRDPVYKVIWLQSKTGMDIFSASTDGQVLWWDIRKL
SEPTESLVLDPSKKWDLDNALGAISLEFETTMPTKFMVGTEQGLVVSCNRKAKTPAEKIV
CTYSGHHGPIYALQRNPFFPKNFLTVADWTARIWSEDIKESSIMWTKYHMAHLLDGCWSP
VRPSVFFTVKMDGTLDVWDILFKQNGPTLSLKVCDEALYSIRVQDNGRYLGCGSQLGTTT
LLEISSGLCTLQKNEKALVSEMFERETKREKILEARHREMRLKERSRSEQSREDEGKEAD
GEESTEELVARAETEFFHMLEAEKTKEMNEEKERDMEKGVCEEKDFQEEHETNGVASFTR
REVSL
NT seq
1818 nt
NT seq
+upstream
nt +downstream
nt
atggagattgtgtacgtgtacacaaaaaagcgcagtgagtttggccgtcagtgtaacttt
tcagaccgtccggctgagctgcatgtggacattctgcctgacccttccctcgctgcaaac
ttcactgtgagagatccatgtaatgccaccatgcagtgcgcaaaggaaatgtcagagcat
gaggtgaacacagagcgctttgaatcagagtcacgaggaataaaccatgtggaaggaggg
tggccgaaagatctcaatccagaggacgtggaggcgaccatccgctacaggaagaaagtg
gagaaggacgaacactatcagaacacgattatgcagattgctggtctcatggaacactgt
agcaagcagaacaacgccactgacatctaccaggacttttttgttgatgaggttgaggaa
gaggtggtggaggaatcagaggaagagccatcagccaagacgatcaatgtcttcagagac
ccaaatgaagtgaagcgcacagccacaagtttatcctggcaccccgatggtaaccataaa
cttgctgtcgcctactcttccctggagtttcagaaagcacccaataacatgagcttcgac
tcctacatatgggacattgaaaatcacaataaacctgagatgaccctgaaacctgtatgt
ccacttgtttgtctggagtacaacccaaaagattcacacattctcgttgggggaggctac
aatggacaaattgcgtactgggacacgcgcaaaggcagccagccagtagagatgtccacc
atcgaacacagccatagagatcctgtctacaaagtcatctggcttcagtcgaagacaggc
atggacatcttctcagcttctacagatggtcaggtgctgtggtgggacattcgtaagctg
agtgagcccactgagagtctggtgctggaccccagtaagaagtgggaccttgataatgcc
cttggtgcaatctcactggagtttgagaccactatgcctactaagttcatggtgggcaca
gagcagggtcttgtggtttcatgcaatcgcaaagcaaaaaccccagctgagaagattgta
tgcacatacagcggacaccatggtcccatttacgccctgcagaggaacccgttttttcct
aagaacttcctgaccgtggctgactggaccgcacgcatctggtcagaggacatcaaggag
tcctccattatgtggaccaagtatcacatggcccatctgttagatggctgttggagtccg
gtcagaccctcagtcttctttacagtaaagatggacggcaccctggacgtgtgggacatc
ttgtttaaacagaacggccccactctcagcctcaaagtttgtgatgaagccctgtacagc
atccgtgttcaagataacggccgttacctgggctgtggctctcagctgggaaccaccaca
ctgctggagatttcatcaggcctgtgcacactgcagaagaacgagaaagccctggtctca
gagatgtttgagcgcgagaccaagcgggagaagattctggaagctcggcacagagagatg
cgtctgaaggaacgcagccgctccgagcagagccgagaggacgagggcaaagaggcggat
ggggaggagagcaccgaggagctggtggcccgcgcagagaccgagttcttccacatgttg
gaagccgagaagaccaaagagatgaatgaggagaaagaaagagatatggagaaaggcgtg
tgtgaagaaaaagatttccaggaggagcatgaaaccaatggtgtcgcttcctttacaaga
agagaagtctctctgtag
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