Pimephales promelas (fathead minnow): 120480013
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Entry
120480013 CDS
T08155
Name
(RefSeq) F-box only protein 33
KO
K10310
F-box protein 33
Organism
pprm
Pimephales promelas (fathead minnow)
Brite
KEGG Orthology (KO) [BR:
pprm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pprm04121
]
120480013
Ubiquitin system [BR:
pprm04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
120480013
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
F-box-like
F-box
LRR_8
LRR_2
LRR_4
Motif
Other DBs
NCBI-GeneID:
120480013
NCBI-ProteinID:
XP_039528847
LinkDB
All DBs
Position
Unknown
AA seq
484 aa
AA seq
DB search
MALCSSVGALALPSELIVHIFSFLSDRDKLRASAVCSRWRECLFYPALWTELKLRVGGGT
NGGGSGSEQTPRLEFLMRKFGSFVRELQLEFAPVDGYLSPLQRGMEAVECDPQFAKDAMV
TYLDQVLCVLGSLRNNRNLQKLSLYGDTCILQDDGILDSSFLSQVDQGGKKMKEIQLLFE
EILSNSRQMKWLSSAFMLCVVTPCSLASLSNASTSSLEHLSLIDNQLPSLISTVELERLA
HLRSLSLDFCDFTSDMCRLLACGDRAPLHRLSLLLNGAALDVKPLGGTAAEEDWKALVRR
STNLRVYVMAMDVCSQDLLRVLKPSVPLERIHLDSYSTLVTDGVVELISQQYHRTLSHFI
LMRDDAGFPDLSVNRNEDPLVLLAWRCVHLAVLIIHGYTVWSHNLVAISRLRGSNLKVLE
VSEESIDFDPDQSVYIEGDPVHNLVKEVSLGLGRVWHPSMDNSMVLNEPTQHFHREMQSF
SAGM
NT seq
1455 nt
NT seq
+upstream
nt +downstream
nt
atggctctgtgcagtagcgtcggagccttggcgttacccagcgagctcattgtccacata
ttttccttcctgtcagaccgagacaagctccgggcctcggccgtgtgctctcgctggagg
gagtgtctcttctaccctgcgctgtggacggagctcaagctgcgcgtcggtggaggaacc
aacggcggcggctctgggtcagaacaaaccccgcgattagagttcctcatgcgcaagttc
ggctcattcgtgcgggagctgcagctggagtttgccccggtggacggatacttgagcccg
ctgcagcgcggaatggaagccgtcgagtgcgacccgcagttcgcgaaagatgcgatggtg
acatatttggatcaggtgttgtgtgtgctcggcagtctgcgtaataacagaaatctccag
aagctgagtctctacggggacacatgcattcttcaggatgacgggattctggacagctct
tttctcagccaggtcgaccaagggggcaagaagatgaaagagatccagctgctctttgaa
gagatcctgtccaacagcaggcagatgaagtggttgtcatctgcgttcatgctctgtgtg
gtgaccccttgctctctggcctctctctccaacgccagcaccagctccctcgagcacctc
agtctgatcgacaaccagctgcccagcctgatttccacagtggaactggaaaggctcgct
cacctgcggtctctgtcgctagacttctgcgacttcacctcggacatgtgccgcctcctg
gcctgcggtgaccgagcgcccctccaccgcctgtctctccttctcaatggcgccgctttg
gatgtcaagcctttgggtggcaccgccgccgaggaggactggaaagccctggtccgtcgc
agcacgaacctgcgtgtctacgtcatggcgatggatgtgtgcagccaggaccttctgcgt
gtgctgaagcccagcgtgcccctggagcgcatccacctggacagctacagcactctggtg
acggatggggtcgtggagctcatctcgcagcagtaccacagaaccctcagccacttcatc
ttgatgagggacgacgccggattcccagacctcagcgtcaaccgcaatgaggacccgctg
gttctcctcgcctggcgctgtgtgcacctcgctgtcttgatcatccatggctacaccgtg
tggtcccacaacctcgtggccatctctcgcctgcgtgggtccaacctcaaagtcctggag
gtgtccgaagagagcatcgactttgacccggaccagtcggtgtacatcgagggagatccc
gtccacaatctagtcaaggaggtgtccctgggcctgggccgcgtctggcatccctcaatg
gacaacagcatggtcctgaacgagcccactcagcacttccaccgtgagatgcagagtttc
agcgcgggcatgtag
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