Pimephales promelas (fathead minnow): 120480039
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Entry
120480039 CDS
T08155
Symbol
cfap43
Name
(RefSeq) cilia- and flagella-associated protein 43
KO
K24223
cilia- and flagella-associated protein 43
Organism
pprm
Pimephales promelas (fathead minnow)
Brite
KEGG Orthology (KO) [BR:
pprm00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
pprm03037
]
120480039 (cfap43)
Cilium and associated proteins [BR:
pprm03037
]
Motile cilia and associated proteins
Tether/Tether head (T/TH) complex
120480039 (cfap43)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_EML_2
WD40_WDHD1_1st
WD40_CDC20-Fz
WDR55
WD40
Beta-prop_EML
WD40_Prp19
WD40_MABP1-WDR62_1st
CFAP43_N
Motif
Other DBs
NCBI-GeneID:
120480039
NCBI-ProteinID:
XP_039528880
LinkDB
All DBs
Position
Unknown
AA seq
1658 aa
AA seq
DB search
MDVLGNLEVRWVQGFTNGTFKFVDKKTACYPCGDFIVFLNVETKTRKTLQSPASGIGAFT
ASGHRRCLAFSDLRLNPSIFVYNYPELELMCELKGTAKLGYTTLALCDTGPYLVSSSSKP
DQTITLWNWESKIPLCSHPVLGEDITALVFNPMNWCQICAVKSKALTIWNVERCGNYHLM
NPSAVDLPATDGSAIECEASPSHMLSGKLTHLSLQMPTSAIAGLSGDKADDFVHLKRIKT
KLCPSATCWSTSSDLYVGCKEGFLLCVNPDTLLVSVLYKPQTDVTSTDDSETSLQEGSFQ
SLALQDCNLFATGIEGILRKIHMKGNKLEVLQTWALDEAASAICFSPDCETLLLTSNTGC
VYRFKPFLKDKIVKVLDVLCGDFVAVAPIYTDRSVCLSVREAGDVQLWALDDGQCMGSIS
LQTHVTSMACCLLAQYVVVGTATGDVLFVEMTTKQKPRLVHRVHFYHVPVDHLVFDQGGN
FLITGASDSRMFVLNARPSKGFEVIGWIEAPGAIVSLSTQYQRESGQVKVLVLCNKTGTE
INEGNVLLLLTLFVQQFTDSTSCVDVYGHLREDVLHSCLYELPHALCSCVLATDKIFGYC
QQRKVLQRFSIPESGEKPSNVQEAVKLIPEKEAAGHFLSPAFLQLSPHQVWLATVGRDGL
VCVCEISTMDRCVQLQCHSCWQDGVGSVCFTPDSQTLITSGLRDGSLVCSRLRLKLSGAG
KAAAATQYGQSVADSFESVVSSENIVLTKMTDWDSQTQSFTRCASFHTEEVNFNEKMSHE
AEQEENYFASPTSSTWLDKKCDVVLQEEIQQYAETKKNLRRNIKVLRDRIKAMMEENESL
ADMEKLEQQEFNLDVEEQQRLQLEGEQEVTRVRKEIEMENLAKCYQREVLKRECWDSMQV
KGKAIKAFHSENEVKNYPMKERTEKELEELHRVETMRQIEQEHSQLQGAILDTIPGEKRE
EMTEEDSPALTGSLSALYGGVNPYLYNQFNLCVREQKINQITLLKDVIYKVKSTFNKEFE
AVYKQKEQEINRVREKMKRISDIMTELDLSETLWEPNLTDNECPERALIVTDSEIKVEKY
LTPEQREKEENLREEDKRQMLAAKSDKMRDQALNVMMGGVLELKKEDVLKTEVPQPEFMS
KPEVQWTEEERKSFKEFEKKAKELREEQEKYRKTLETEMKKLLTSIKEATQMFDERLTKL
FERKVKSEMVIYQEELKIANLVYSIQTEEEILCRENQLSLKLEKARIVKNKIGEELKKYR
ETVDEFREVYDNTVAEDKLLDKGFRKEFYDIPGHITDQLYKLYKRRPRGQKIKTQTENNP
FKEGALLGTASSDGLSLMMKAMEELDAPENMPEGLDPVVWERFSLARRAKVESEQKVKLK
ALALAEMQAFLQRRTDEDENAQLEIKNLIDELNGLCEEKNRFRLDSMVQILLHQGQVEVE
AGDFIADYTDALLIHREVIEDLNSTIRALGDQKIASMVECKDFRKGIIQQEWDHRRMRMK
LEDLSNKARDIQTLRITQEIQDYLTETSNDNMVLKHLTALERTRDFQEMTHQKKIETCKK
QIKHLNRQHAQMQEKNAALDLRIADMEITVTERGNIVEAVAMGDSKTTEAEKNYQDIILR
KKLLNTVRAQSEEILQLRAEVEKLRMKNFPALSQRHYN
NT seq
4977 nt
NT seq
+upstream
nt +downstream
nt
atggatgtactgggaaacttggaagttcggtgggtgcaaggattcaccaatgggacattt
aaatttgtcgacaagaaaacagcatgctacccctgcggagatttcattgttttcctcaat
gtggaaactaaaacgaggaagactctgcagagtcctgcttctggtattggggcctttaca
gcaagtggacatcgcaggtgtcttgctttctctgacctcagactgaatccttccatcttt
gtctacaactatccagagcttgagctaatgtgtgaactgaaaggtacagctaaactgggc
tatacaactttggcactgtgtgatactggcccttatttagtcagttcttcctccaaacct
gatcaaaccatcaccttatggaactgggagagtaagattccactttgtagccatccagtt
ttgggagaggacatcactgcactggttttcaaccccatgaactggtgtcaaatttgtgct
gtaaaatctaaagcccttaccatctggaatgttgaaagatgtggcaactatcatttgatg
aatcccagtgctgttgatctccccgccactgatggttcagctattgagtgtgaagcaagc
ccgtctcatatgctcagtgggaagctgacccacctcagtcttcagatgcccacttcagct
atcgctggactgagtggagacaaagctgatgactttgtgcatttgaaacgaataaaaaca
aaactgtgtccaagtgccacctgctggtcaacttcttctgacctgtatgttggttgcaag
gaaggtttcctgctttgtgtgaatcctgacactttgcttgtctctgtcctgtataaaccc
caaactgatgtaaccagcacagatgacagtgaaacgtcactacaagagggcagtttccag
agcttagcactgcaggactgtaatctctttgctacaggaattgaaggcattttacgaaaa
atacatatgaaaggaaacaaattagaggtattgcagacttgggctttggatgaggcagcc
tcggctatatgcttttcccctgactgtgagacactgctgctaacttctaacacaggctgt
gtttacagattcaaaccatttctgaaggataaaattgtcaaagtccttgatgtcctctgt
ggagattttgtggccgttgctccaatctacactgatagaagcgtttgtttgtcagtcaga
gaagcaggagacgtacagctgtgggctctggatgatggacaatgcatgggctctatctct
ctgcaaacacatgtgaccagtatggcatgctgcctcctagcgcagtatgttgttgtaggg
acagccactggagatgtcctatttgtggagatgactacaaaacagaagcccagactagtt
cacagagttcatttctaccatgtccctgtagaccatttagtgtttgatcaaggtggcaac
ttcttaatcacaggagcatcagactcacgcatgtttgtgctgaatgcaaggccatcaaaa
ggatttgaagttattggatggattgaggctccaggtgccattgtaagcctttccactcag
taccaaagggaaagcggacaggttaaagtgctggtgctatgcaacaagacagggacagaa
attaatgagggaaatgtacttctgttactgacgttgtttgtgcaacagtttacagactca
acaagttgtgtggatgtctacggccatctgcgtgaagatgtccttcacagctgtttgtac
gagctccctcacgcactttgttcttgtgtcctggccacagacaagatatttggttactgc
caacagagaaaagtcttgcaaagattcagtatccctgagagtggtgaaaagccctctaat
gtgcaggaagcagttaaacttataccagagaaggaggcagcgggacattttctgagccct
gcatttctacagctctctccacatcaagtctggctggcaacagttggcagggatggactg
gtgtgcgtctgtgagatttcaacaatggacaggtgtgtgcagctgcagtgccactcatgt
tggcaggatggagtcggatctgtttgtttcaccccagacagtcagaccctcatcacctct
ggcctgagggatggctcgcttgtctgcagcaggctaaggctaaagctttctggggctggc
aaagcagctgcagccacccagtatggtcaatcagttgctgattcttttgagtcagtagtc
tcctcagagaacattgtcctcaccaaaatgactgactgggattcacagacacaatccttt
accagatgtgcctcatttcatacagaagaggtcaattttaatgaaaagatgagtcatgaa
gctgaacaagaggaaaactattttgcatccccaactagttctacatggcttgataagaaa
tgtgatgtggttctccaagaagagattcagcagtatgcagagacgaagaagaacctaaga
agaaacattaaggttcttcgtgacagaatcaaagctatgatggaggagaatgagagtctg
gcagacatggagaaactggagcaacaggaatttaacctggatgttgaggagcaacagaga
ctgcagctggagggagagcaggaggttaccagggtgaggaaggagattgagatggagaat
ctggctaagtgctatcagagggaggtcctgaagagagaatgctgggactccatgcaagtc
aaagggaaagccattaaggcctttcattcagaaaatgaggtgaagaattaccccatgaag
gaacgcactgaaaaggaacttgaagagcttcatagggtcgagaccatgaggcagattgaa
caggaacattcacaacttcaaggggcgattttagacacaatccctggagagaaaagggag
gagatgacagaagaggacagtcctgctctgactggcagtctgagtgctctttatggaggc
gtcaacccttatctctacaaccagtttaacttatgcgtcagagagcagaaaatcaaccaa
atcaccttgctaaaggatgttatctacaaagtgaagagcacattcaacaaagaatttgag
gcagtttacaagcagaaggagcaggaaatcaaccgtgtcagagagaagatgaagcgtatc
tctgatattatgactgagctggacctgagtgagaccctgtgggagcctaatctcaccgat
aatgagtgtccagagagagctcttattgtgaccgactcagagatcaaggttgagaaatac
ctcacccccgagcagagagaaaaagaagaaaatctaagagaagaagacaaacggcaaatg
cttgcagccaagtctgacaaaatgagagatcaagcgctcaatgtaatgatgggtggagtt
ctggagcttaaaaaagaggatgtgttgaagacggaagtacctcagcctgagttcatgtct
aaacctgaagtacagtggacagaagaagagagaaagagcttcaaagagtttgagaaaaaa
gcaaaggagctcagagaggagcaggagaaatacagaaaaacactggaaacagaaatgaag
aaactactgacatctattaaagaggctacccagatgtttgacgaaagactcacaaagctg
tttgaaaggaaggtgaaatcagagatggtgatataccaagaggagctcaagattgcaaat
ctggtttactccattcaaaccgaagaagagatcctctgcagagagaatcagttgagccta
aaacttgagaaagcacggattgtaaagaataaaattggggaagaactgaaaaaatacagg
gagaccgttgatgagtttagggaggtgtatgataacacagtcgctgaggacaaacttctc
gacaaaggatttcgcaaagagttttatgacatccctggacatataactgaccagctctat
aagctttacaaacgcagaccaaggggtcagaagataaaaactcagactgaaaacaacccc
tttaaagagggggcgctgttaggaacagcatcatctgatggactctctctgatgatgaag
gccatggaagagttggatgctccagagaacatgccggaaggattagatccagtcgtttgg
gaaagatttagtctggccagacgggccaaagtggaaagtgaacaaaaggtcaaactaaag
gcactggctctggcggagatgcaggcttttcttcagaggagaacagatgaggatgagaat
gctcaacttgaaatcaaaaatctcattgatgaacttaatggcctttgtgaagagaagaat
agatttcgactggacagtatggtgcagatccttctacaccaaggccaggtggaagtggag
gctggcgacttcattgcagactacaccgatgctctgctgatccatcgcgaagtaattgag
gacctgaacagcaccatcagggctttaggagatcagaagattgccagcatggtggagtgt
aaagacttccgcaaaggaatcatacagcaggagtgggatcacaggagaatgagaatgaag
ctggaagatctcagcaacaaagccagagacatacagaccctgcgcatcactcaggagatt
caagattacctgactgaaacaagtaatgacaacatggtgttaaagcatctcacagctctg
gagaggactagagatttccaggaaatgactcatcaaaagaaaattgagacttgcaagaaa
cagataaagcacttgaacagacaacatgcacaaatgcaagagaagaacgctgccctcgac
ttaagaatagctgacatggagataactgtcacagagagaggaaatattgtcgaggctgtt
gcaatgggagatagcaagacgacagaggcagagaagaactaccaagatatcatcttgaga
aagaagctgctgaacacagtcagagcacaatctgaagagatactccaactgagagcagag
gttgagaaactgcgtatgaagaacttcccagctctttctcaacgacattacaactga
DBGET
integrated database retrieval system
