Pimephales promelas (fathead minnow): 120480204
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Entry
120480204 CDS
T08155
Symbol
stxbp5b
Name
(RefSeq) syntaxin-binding protein 5 isoform X1
KO
K08518
syntaxin-binding protein 5
Organism
pprm
Pimephales promelas (fathead minnow)
Brite
KEGG Orthology (KO) [BR:
pprm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pprm04131
]
120480204 (stxbp5b)
Membrane trafficking [BR:
pprm04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
120480204 (stxbp5b)
SNARE
VAMP, Ykt6, Sec22 (R)
Tomosyn
120480204 (stxbp5b)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LLGL
WDR55
WD40_CDC20-Fz
Beta-prop_EML_2
WD40_WDHD1_1st
ANAPC4_WD40
Beta-prop_RIG_2nd
WD40
WD40_Prp19
Beta-prop_IFT140_1st
Beta-prop_HPS5
Beta-prop_WDR90_POC16_2nd
Beta-prop_TEP1_2nd
Beta-prop_WDR19_1st
Lgl_C
EIF3I
Beta-prop_NUP159_NUP214
Synaptobrevin
Beta-prop_VPS8
WD40_like
CFAP43_N
Motif
Other DBs
NCBI-GeneID:
120480204
NCBI-ProteinID:
XP_039529123
LinkDB
All DBs
Position
Unknown
AA seq
1189 aa
AA seq
DB search
MKKFNIRKVLDGLTASSSSSSAAASPPSGSRENDMIQETLQSEHFQLCKTLRHGFPYQPS
SMAFDPVQKILAIGTQNGALRLFGRAGVECYCQHESGSAVIQLEFLVNEGALVSALADDS
IHLWNLRQKIPAILHSLKFNRERITFCHLPFQSKWLYVGTERGNIHIVNVESFTLSGYVI
MWNKAIELSSKSHPGPVVHISDNPMDEGKLLIGFECGIVVLWDLKSKKADYRYNYDEAIH
SVAWHHEGKQFVCSHSDGTLTTWNVRIPAKPAQIITPHGKQPKDGKKPEPCKPILKVEYK
TTRVGEPFMILCGGLSYDTVGRRACLTVMHGKSTAVLEMDYSIVDFLTLCETPYPNDFQE
PYAVVVLLEKDLVVIDLAQIGYPIFENPYPLSIHESPVTCCEYYADCPAEIIPALYSVGS
KQKRQGFSKKEWPISGGNWGQGTLSFSEIIVTGHADGSIKFWDSSALMLQVLYKLKTAKV
FEKPRSKEEKSTTDIVDEDPFAIQILSWCPESRVLCVAGVSAHVIVYRFSKQEVTTEEVQ
LLEVRMQCELNEVESPEGGGEQASAVSTPGTSSSPQTSLPQSHPSTSSNNSSDGLRDNVP
CLKVRSSPLKQSPGYQVELLIQLVWVSGEPPQQITSLAVNSAYGLVAFGNGNGLAVVDYL
QKTLLLNMSTAELYGSTDPHHRQPRSPRKARQPSAGFCDGNDASATPEERCKSPTSDCVV
AVGSGSPCNSDEDSKHKFIDRVMSKSKRISKTVANDFAKISRKINMIADQKDERRVRRHC
SLPIKKQQSCVKEMKRKHAASFRETSLCDLNARDNSFSRSRSSSVTSIDRESREVVSSLY
FCDSLSKKSETLAVPSLWVGTSLGGMMAITLSVPSTPEQRMQQPVAVSFCGSVVRLKGGI
LRMAQLDASGTLLPHVYEPWYEPNAPEEEREPPRRRRPTSPPSSQENQDCQYIVVCSEKQ
AKVVALPSQNFIYEHNITEASFVLRADVVTMTSGVGLACFCANGHIMTLSLPSLRPLLDV
NYLPLTDMRIARTFCFSNQGQAMYLTSPTEIQRITYSQETCDNLQEMLGELFTPVETPEA
PNRGFFKGLFGGGAQSLDREDLFGEVTAGKASRSLAQHIPGPGGMEGMKGAASGVVGELA
RARIALDERGQKLGELEERTAAMMSSADSFSKHAHDIMLKYKDKKWYQL
NT seq
3570 nt
NT seq
+upstream
nt +downstream
nt
atgaagaagtttaatatcaggaaggtgttggacggcttgactgcgtcctcctcttcctcc
tccgctgccgcgtcccctccatcgggaagcagagagaatgacatgattcaggagaccctg
cagtcagagcatttccagctctgcaagacactgcgacatggctttccctatcaaccctct
tccatggcctttgaccctgtacagaaaattctggctattggcacacagaatggagcccta
agactattcggccgagctggagtggagtgttactgccagcatgagagcggatcggctgtc
atccagctggagtttcttgtcaatgaaggggcgctggttagtgctttggcagatgacagt
attcatttgtggaatctgaggcaaaaaatccctgccattctccattctcttaaatttaat
cgggagaggatcacgttttgccatttgccgtttcagagtaaatggctctacgtgggcacg
gaaagagggaacattcacatcgtcaatgtggagtccttcaccctctcaggctatgtcatc
atgtggaacaaagccattgaactttcctcaaagtctcaccctggacctgtagttcatatc
agcgataaccccatggacgaagggaaacttttaattggttttgagtgtggaatagttgtg
ctgtgggacttgaagtcgaagaaggctgactatcggtacaactatgacgaggcgatccac
tcggtggcttggcatcatgaggggaaacagtttgtgtgcagtcactcagatggcacactt
accacatggaatgtacgcattcctgccaagcctgcccagatcattacaccgcatggtaaa
cagcccaaggatggaaagaagccggagccttgcaaacccatcttgaaagtggagtacaaa
actaccagggtcggggaaccattcatgatactgtgtggaggtttgtcatatgatacagtg
ggtaggcgagcctgtctgactgtgatgcatgggaaaagcactgcagtgctggagatggac
tactccatagtggatttccttacgctgtgtgaaaccccatatccaaacgatttccaggag
ccttatgccgtcgtcgtcctgctggagaaggatttggttgttattgatcttgcacagatt
gggtatccgatctttgagaatccgtatcctctgtccatccacgagtctccggtgacctgc
tgcgaatattatgcggactgtcctgctgaaatcattcctgcactttactcagtgggctcc
aaacaaaaaagacagggcttcagtaagaaggagtggccaataagtggaggtaactggggc
cagggaacactaagtttctcagagatcatcgtcactgggcatgctgatggatctatcaag
ttttgggattcctcagcattaatgctgcaggttttgtataagctaaaaacagcaaaggtg
tttgagaagccccgtagtaaagaggagaaatccaccactgacattgtggatgaagatccg
ttcgccatccagatcctgtcttggtgtccagagagtcgtgtgctctgtgtggctggagta
tcggctcatgtcatcgtctacaggttcagcaaacaggaagttaccactgaagaggtccag
ctgctggaggtgcgtatgcagtgtgaactgaatgaagtggagtctcctgagggcggagga
gagcaggcgtctgccgtttccaccccaggaacatcatccagccctcagaccagcctgcct
cagtcccacccctccaccagcagcaacaactcctccgacggcctgcgagataacgtgccc
tgtctcaaagtcaggagttctcctctcaaacagtctccgggttaccaggtggagctgctc
attcagctggtgtgggtcagcggggagccgccacaacagatcaccagcctggccgtcaac
tctgcgtatggcctagttgcatttggcaacggtaacggacttgcagtggtcgattacctt
cagaaaacccttcttctgaacatgagcacagccgagttgtacggctcaacagatcctcac
cacagacagccacgctcaccccgcaaagccagacagccttcggcaggtttttgtgatgga
aatgatgcatcagccaccccagaggagagatgcaaatcaccaacttcagactgtgttgtt
gccgtaggctccggttcaccatgcaattctgatgaagacagcaaacacaagttcattgac
agggtgatgtccaaaagcaagcggatatccaagactgttgccaatgactttgctaagata
tcccggaaaattaacatgattgctgatcagaaagatgaaaggagggtacgccgtcactgc
tctctgcctattaagaaacaacagagttgtgtgaaggaaatgaagaggaaacacgccgcg
tctttccgtgagacctcactatgtgacctcaatgccagagacaactcgttcagccggtcg
cgcagctccagtgtgaccagcatcgacagagagtcacgtgaggtcgtgtcctccttatac
ttttgtgactccctttccaagaagagtgagacgttggcagtgcccagcctgtgggtgggc
acctcattgggtggcatgatggccatcaccctcagtgtgccctccacgccagagcagagg
atgcaacagcctgtggccgtctctttctgtggttcagtagtgcgcttgaaaggaggcatt
ctgcgcatggcccagctggatgccagcgggacccttctgccccacgtttatgagccctgg
tatgagcccaacgcccctgaggaagagagagaaccgccacggagacgccggcccacctct
cctccttcatctcaggagaaccaggactgtcagtacattgtggtttgctcagagaaacag
gctaaggtggtggcactgccctcccaaaacttcatctacgagcacaacatcactgaggcc
tccttcgtgcttcgagctgatgtggtgacgatgacctcgggggtcggcttggcctgtttc
tgtgccaatggccacatcatgaccctcagtttgcccagcctccggccactgctggatgtg
aactaccttcctctgacggacatgaggatagccagaaccttctgtttctcaaaccaaggc
caggccatgtacctcacatcgcccactgagatccaaagaatcacctatagccaggaaacc
tgtgataacctgcaggagatgcttggagagctgtttaccccagtggagacaccagaggcc
ccgaacagagggttcttcaagggcttatttggaggcggtgctcagtccttggacagagag
gacctttttggagaggtgactgctgggaaggcttcacgcagcctggcgcagcacatccca
ggtccaggtggcatggagggcatgaagggggccgcgtccggtgtggtgggagagttggca
cgggcaaggatagctctggatgagagagggcagaaactaggcgagctggaggagaggaca
gcagccatgatgtccagcgcagactccttctccaaacatgcacatgatataatgctgaaa
tacaaggacaagaaatggtaccagctctga
DBGET
integrated database retrieval system
