Pimephales promelas (fathead minnow): 120480416
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Entry
120480416 CDS
T08155
Symbol
trim25
Name
(RefSeq) E3 ubiquitin/ISG15 ligase TRIM25 isoform X1
KO
K10652
tripartite motif-containing protein 25 [EC:
2.3.2.27
]
Organism
pprm
Pimephales promelas (fathead minnow)
Pathway
pprm04622
RIG-I-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
pprm00001
]
09150 Organismal Systems
09151 Immune system
04622 RIG-I-like receptor signaling pathway
120480416 (trim25)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pprm04121
]
120480416 (trim25)
Enzymes [BR:
pprm01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
120480416 (trim25)
Ubiquitin system [BR:
pprm04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
120480416 (trim25)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PRY
SPRY
TRIM_CC
zf-RING_UBOX
zf-C3HC4_4
zf-RING_2
ANCHR-like_BBOX
zf-C3HC4
zf-C3HC4_2
zf-C3HC4_3
zf-B_box
zf-RING_5
14-3-3
Motif
Other DBs
NCBI-GeneID:
120480416
NCBI-ProteinID:
XP_039529483
LinkDB
All DBs
Position
Unknown
AA seq
671 aa
AA seq
DB search
MAENMSLLGLEDELTCSICLCLFENPVSLICGHSFCASCLEATWKDKLLPLSCPHCRMAF
SSKPELKKNTVLSAVLDAYRIKAGVPEPLKEPFEVKKKDPDEMQCDTCMEAKAVKTCLTC
MASYCEDHVRPHHENAIFRAHQLSDPLPDLMERLCSDHGKLMEFYCVQHQSCICTNCLQC
VHKGCEFITADDRRFKQKTDLTDKLNILEDKTDKNQQVLTQMKEQQTKLKELATTRKRML
EVEYRQIREAIDRDEKEAMFAIDKEQEKGQSKLVSLMKKFNENIEKMNRTKSEINTLLDQ
SQSITFLKASVDLPSVVNFEPHNPRMTVESKEVIAYHSSAVALRDWITKLMEQPTENRIF
VLKPEFEKSVLGSGNQFSIPPLLPHPREYPRDFAVSHEMSRMSSPSQAFTPKTKAQGAKQ
KNKIPNKELKDHKERKDQKSNRSRNPSKGINPAFSKSMENLLDFTPKTVDIPDISQPLSS
PAAQNFVKRSELLKYGTILNFDVRTAHKRLSLSENNTKATVSDDPVNYPDIPLRFSVCSQ
VLCTKGFSQGRHYWEIKMSSNNFCGLGLAYGRIDRKGPASRLGRNAESWCVEWFNMKLSA
WHNSIETVLANPNPSRVGVLLDCDQGSATLYNVQDRSFPFHTFVFPFTEAVYPAFWIFSN
GSSVSLCKLSN
NT seq
2016 nt
NT seq
+upstream
nt +downstream
nt
atggcggaaaatatgtctctacttggtctcgaagacgagttgacatgcagcatttgttta
tgtcttttcgagaacccggtgagtttaatctgtggacacagtttctgcgccagctgtctc
gaagcgacatggaaagataagttattaccactgtcctgccctcattgccgaatggctttc
agcagtaaaccagaactcaagaagaacaccgtcctcagcgcggtcctggatgcctacaga
ataaaagcgggtgtccccgaaccccttaaggaaccatttgaggtgaaaaagaaagatcca
gatgaaatgcaatgtgacacctgcatggaagccaaagcggtcaaaacatgtctgacttgt
atggcttcttattgtgaggatcatgttaggcctcaccatgagaatgctattttccgggcg
catcagctgtctgacccgctcccagatctgatggagcgtctctgttccgatcatggcaaa
ctgatggagttctactgcgttcagcaccagagctgcatctgcaccaattgtctgcagtgc
gttcataaaggctgtgagttcattaccgcagatgaccggcgctttaaacaaaagactgac
ctgactgacaagctcaacatccttgaagacaaaactgacaagaatcagcaggttctcaca
cagatgaaggagcaacaaaccaaattaaaagaattagctacaacccgcaaacgtatgctt
gaggtagaatacaggcagatcagagaagcgatcgaccgtgatgagaaagaggcaatgttt
gctattgataaggaacaggagaaaggtcagagcaaactggtctccttgatgaagaaattt
aatgagaacatcgagaagatgaataggaccaaatctgagatcaacacactgttggaccag
tcgcaatccatcacattcttaaaggcctctgtggatttgccctcagtggtaaattttgag
ccccataaccctcgcatgactgttgaaagtaaagaggtgatagcttaccattcctctgca
gttgcactgagggattggatcaccaaattaatggagcagccaacagagaacagaatcttt
gtacttaaaccagagtttgaaaaatctgttcttggttcaggaaaccaattctcaattcct
ccactcctgccacatccaagagagtatccaagagattttgctgtgagccatgagatgtca
cgtatgagttctcccagccaagccttcacccccaaaaccaaggctcaaggagctaaacag
aaaaacaagattcctaataaagagcttaaagatcacaaagaacgtaaagaccagaagtca
aacagatccaggaatccctctaaaggaataaaccctgctttctccaaaagcatggagaac
ttgcttgacttcacacctaaaactgtagacatacctgacatatctcagcctctaagttca
ccggctgcgcaaaactttgttaaaaggagtgaacttcttaaatatggcactatcctcaat
tttgatgtcagaacagctcacaagcgactttccctgtctgaaaacaacaccaaagcgaca
gtttcggatgaccctgttaactatccagatattccccttcgcttttctgtctgttcccag
gtgctttgcacaaagggtttctctcagggccgtcattactgggagatcaaaatgagcagt
aacaacttctgtggattgggccttgcatacggaagaattgaccgcaagggtcctgctagc
cgccttgggcgtaatgcagaatcctggtgtgtggagtggtttaacatgaagctttccgca
tggcacaacagcattgagacggtgttggcaaatcccaacccaagccgtgtgggcgtcctg
ctagactgcgatcagggaagtgcaactctctataatgtgcaggaccggtccttccccttc
cacaccttcgtcttccctttcactgaggctgtttatccagctttctggatcttctcaaat
ggttcttctgtgtctctgtgcaagcttagcaactga
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integrated database retrieval system
