Pimephales promelas (fathead minnow): 120480441
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Entry
120480441 CDS
T08155
Symbol
slitrk3b
Name
(RefSeq) SLIT and NTRK-like protein 3 isoform X1
KO
K25834
SLIT and NTRK-like protein 3
Organism
pprm
Pimephales promelas (fathead minnow)
Pathway
pprm04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
pprm00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
120480441 (slitrk3b)
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Paralog
GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_5
LRR_9
LRR_14
Motif
Other DBs
NCBI-GeneID:
120480441
NCBI-ProteinID:
XP_039529524
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All DBs
Position
Unknown
AA seq
892 aa
AA seq
DB search
MLLCSEGALEAMHLPAFGESMLWVTLLSTIALGWTTPIPLLDDSEEIDEPCFEPCYCEVK
EGLFHVHCDSKGFTNISQVSQSWLRPFKLYLQKNSLRKLYFNSFLHLNNAVAINLGNNAL
QDIHVGAFNGLSSLKRLYLHENKLEVFRNDTFLGLESLEYLQADYNVIKRIDSGAFRNLH
KLRVLILNDNLIPMLPAFLFRSVSLTHLDLRGNRLKTLAYKGILEYIGRSLMEIQLEENP
WNCVCDIIQLKAWLERIPYTAVVGEITCEYPFHLHGKDLREIKRGELCPLLNDGEIDSIL
AVLHLPFYTGRARPTKPSSIVSPNQNTVSSVEQRERPPKPTKRPRPSKTPPTPRSVFPNQ
PPVAGYQTRPPIPIICPIGCTCNLHINDLGLTVNCKENGFRNISELMPRPLNAKKLYLSG
NLIQRIYKSDFWNFSSLDLLHLGNNQIFYVQEGAFVNLPNLRSLYLNGNSIVKLTLDMFH
GLHSLEYLYFEYNEIREIQPAAFSLMPSLQLVFLNNNLLRTLPVGTFAGSSLTRLNLRNN
YFHCLPVSGVLEHLHAVVQIDLNQNPWDCSCDIIPLKDWLDTLSLVVIVGEVVCKTPELV
SGKDLRSLNSEVICPELRQSSLSPAETDSGLITTYPEVGPHPPKGAIPLSVLILSLLVLF
VSAFFAAAALCAYALKKREKLPFRKQGEVGLAGIQMECGIFTEQPPTLPETPPSNHVYDS
IGAPSSHMCSNPVYKSGQEESGQKHPFSETKESGSHYRTLVEKEKEWTMAISSSPINTIV
SVGPPCGDIAGFHENGILCPTVIDSQGPTPKVGLVDSLFGTNPQFSNLPDRHTHPPSEYP
HAKQDARQKQTITTTGTRTGCPNQTQSDYPELRARLKTKMDYIDMLERSYQF
NT seq
2679 nt
NT seq
+upstream
nt +downstream
nt
atgctgctgtgcagtgaaggagctcttgaggctatgcacttgcctgcatttggtgaaagc
atgttgtgggttacactgctaagcacaattgcacttggatggacgacacctatccctcta
cttgatgattcagaagaaatagacgaaccttgctttgagccctgctactgcgaagtgaag
gaaggcctgttccacgttcattgtgacagcaaaggatttacaaatattagccaagtctca
cagtcatggcttagaccattcaagctctacctgcagaaaaactcgttacggaagctctac
ttcaacagttttttgcacttgaacaatgcagtggccattaatctgggcaataatgccctg
caggacatccatgttggggctttcaatggtttgagctccctgaagaggttgtaccttcac
gaaaacaagctggaagtgttccggaatgacacatttctcggactggagagtttagaatac
cttcaggcagactataatgttatcaagagaatagacagtggggcgttccgaaatctccac
aaactcagagtgctcatccttaatgacaatttaatacccatgctgccggcgtttcttttt
agatctgtctctctgacgcaccttgacttgagaggcaaccgactaaagacgttggcttat
aaagggattttggaatatatcggtcgcagtcttatggagatccagttggaggagaaccct
tggaactgtgtctgcgatatcatccagctcaaggcctggttggagcggattccgtacact
gcagttgttggcgagatcacgtgcgagtaccctttccacctccacggaaaggacctcaga
gagatcaaacgcggtgagctttgtcccttattaaatgatggcgagattgattcaattcta
gccgtcctacacttaccattctacacggggagagcgaggcctacgaagccgtcatctata
gtctcaccgaatcaaaacaccgtctcctctgtggaacaaagagaaagacctccaaagcca
acaaaaagacccaggccctcaaagacaccaccaacaccacgcagtgtgttccctaatcag
ccgcctgtagccggataccagacacggccgcctatacctatcatttgccccattggatgt
acctgtaacttgcatattaatgacctaggtttgacagtcaactgtaaggagaatgggttt
cggaacatttctgagttgatgcctcgacccttgaatgccaagaagctttacttaagtgga
aatctcattcagagaatatacaagtccgatttttggaatttctccagtcttgatttattg
cacttgggaaacaatcagatattttacgttcaggagggggcttttgttaatctccctaat
ttgagaagcctttacctgaacggtaatagtattgtcaagttaactcttgatatgttccat
ggtttgcacagccttgagtatttgtattttgagtacaatgagatacgagaaatccagccg
gctgccttcagtttaatgccctccctgcagcttgtttttctcaacaacaacctcttgcga
acattgcccgtgggaacatttgcaggtagctcgctgacacgcctgaacctgcgcaacaac
tactttcattgcctcccggtcagcggcgttctagaacacctgcatgctgtagtccagatc
gacctaaatcagaacccctgggactgctcctgtgacatcatccctctcaaagattggctg
gacacgctgagcttagtggtcatagtcggagaagtggtgtgtaagacccccgagctggtc
tcaggaaaagatttacgctctctgaattctgaagtgatttgccctgagctccgacagtcc
tcactgtctcctgccgaaacagatagtgggcttatcactacgtatcccgaggtggggccg
cacccgccgaaaggtgccatacccctctctgttctcattctcagcctgctggttctgttc
gtgtctgccttctttgctgcggcagctctttgcgcatatgctcttaaaaagcgtgaaaag
cttccctttaggaagcaaggggaagtgggcctggcaggcattcagatggaatgtgggata
ttcacagaacagccaccaaccttaccagaaactcctccttccaatcatgtgtacgatagc
atcggtgctccctcttcgcacatgtgcagcaaccccgtttacaaaagcggacaggaggag
tcagggcagaagcatccattctcagagacaaaagagagcggttcacactacagaacgctg
gtggagaaggaaaaggagtggaccatggccatctccagctctcccattaacactattgtc
agcgtcggcccgccgtgtggtgacattgccggctttcatgaaaacggaatactctgtcca
actgtcattgatagccaaggtcccacgcccaaggtgggattagtggacagtctttttggc
acgaatccccagtttagcaacctgcctgacagacacacacatccaccctcagagtatcca
catgccaaacaggatgccagacaaaagcaaacgatcacaaccacagggacaaggacagga
tgtcctaatcaaacccaaagtgattaccctgagctgagggctagactcaaaacaaagatg
gattacattgatatgctggagaggtcataccaattctaa
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