Pimephales promelas (fathead minnow): 120480481
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Entry
120480481 CDS
T08155
Symbol
tmf1
Name
(RefSeq) TATA element modulatory factor isoform X1
KO
K20286
TATA element modulatory factor
Organism
pprm
Pimephales promelas (fathead minnow)
Brite
KEGG Orthology (KO) [BR:
pprm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pprm04131
]
120480481 (tmf1)
Membrane trafficking [BR:
pprm04131
]
Endosome - Golgi transport
Rab GTPases and associated proteins
Rab associated proteins
120480481 (tmf1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TMF_TATA_bd
TMF_DNA_bd
Motif
Other DBs
NCBI-GeneID:
120480481
NCBI-ProteinID:
XP_039529586
LinkDB
All DBs
Position
Unknown
AA seq
1136 aa
AA seq
DB search
MSWFNASHLSSFAKQALTTAQKSIDRVLDIQEEEQWGDTTNPSFADPPSKAVSTGWGMNQ
WDSPSEEHTKTLPPSSEAITKPVTWTVVDESEDFFSAFLPHGEIQTVSNIKVVSVPPAKS
NRRLREKADQGKELEVSDSQGQTDLSKCSSQETFEIKPTGTELLEQNSSSTDEQSQPELV
VPASVVAPEEAVEQEASEDVTESDGLALTSDVTLTNVPLSSSEAESVGVFEPALTIETTN
PDNALPVPSKEILLESKDAKSEDRQSNTPSPPVSAFSSGTSTTSDIEVLDHESVLSESSA
SSRQETAEAKAGLHLMQGSFQLLSASTCSDFPRLDEYPKLTESCGSSSDAFERIDSFSMQ
SLDSRSVSEVNSDDEIPGNRTLASITAGPLPAPPQSVPQTKQEEEEGIAESINDQSLDDN
EMEESGRSATPVNCEQTDELQEGEQETESDLTLTNQKTDVIETAAPQSTEEKLEDSPCQI
FDLKKIIEELSNRLEKRESQLLVVSKDKARLEEECDNLKDEMISLREESSAVQSLKDEFT
QRIAEAERKAQLACKERDIAKKEIKGLREELASRLNSNETLELIKEKEEQIRELLEEGEK
LSKQQLQHSNIIKKLRVKERESDAQITKQTKKLKEQDEELKNLQQVLDGKEEVEKQHREN
IKKLNAVVERQEKELSKLQISSEELQENNRSLQAALDSSYKKLAELHKANATKDSEAQEL
ALSREVHAKEELSLALEKVKEESRLQQEALADQVADLRLALQRAEQQQAKKEDYLREEIS
ELQQRLQEAETRNQELSQSVTSASRPLLRQIENLQATLGAQTTSWEKLEKNISDRLADAQ
AQLAVSIEKERSATEELLAIRAQIASLESQASLLRQEKGRLQGQLDAEKLRREKLEDDFS
RERVELENLKWEYARVSEEAKKEKLLLANQLEMEKMKVEQEKKKCYLAQEALKEKERKSL
SLSVTDAPASSTPSLSRSSSVSGAEHAGLPSSVFSQQEDSLDHSFSTMTMSISGTNLYEA
ARLGGGSSIIESLQSQLKLREGEIAQLQMEIASLERSRTVMAEELVRLTNQNDEIEDEVK
EIPKLKVQLKDLQQRHNTILQMYGEKAEEAEELRLDLEDVKNMYKTQIDELLKNQK
NT seq
3411 nt
NT seq
+upstream
nt +downstream
nt
atgagttggttcaacgcgtctcatctgtcgagttttgccaaacaagctctgacaactgcc
cagaaatctatcgacagagttctggacattcaagaagaggagcagtggggtgacacgacc
aacccgtcctttgcagatccaccaagcaaggcggtatcaacaggatggggtatgaaccag
tgggactcgccctctgaggagcataccaagactctccctccatcatccgaggccattact
aagcccgtcacatggaccgttgttgatgaatcggaggatttcttcagtgcctttctgcct
catggggagatacaaactgtaagcaacattaaagtggtgtctgtgccacctgccaagtca
aaccgcagactacgggaaaaagcagaccaggggaaggagctggaagtcagtgattcacaa
ggtcagacagacctcagtaaatgcagcagccaggaaacttttgagataaagccaactggg
acagagcttttggagcaaaattcatcctcgacagatgagcagtcacaaccagagctggtt
gttcctgcttctgttgttgcaccggaagaagctgtcgaacaggaggccagcgaggatgtg
acagagtcagatggcttggctttaacttcagatgtcacactcacaaatgtacctttatcc
tcttcagaggccgaatctgttggtgtgtttgaaccagctttgaccatcgagaccacaaat
ccagataacgccttgcctgttccttctaaagaaatcctgttagaatccaaagacgctaaa
tcagaggacagacaaagcaacaccccgtctccccctgttagtgccttctcttctggtact
tccactaccagcgacatagaggttttggaccacgagagtgtgctaagcgagagctcggct
agctccagacaggagactgcagaggctaaagctggtctgcacctaatgcaaggctctttc
caactgctctccgcctcaacatgcagcgacttccctcgtttggatgaatacccaaaactc
acagaaagctgcggctcctcgtctgatgcctttgagcgcattgactcatttagcatgcag
tcgctggacagccgcagtgtcagtgaagtcaattctgatgacgagatcccaggcaaccgc
acattagcctccatcacggccggacctttgcctgctcctcctcagtcagtgccacagact
aaacaggaggaagaggagggaatagctgagtctattaatgatcaatcactggatgataat
gagatggaggagagcggccgcagtgcaacaccggtgaactgtgagcagacggatgagctg
caggagggcgaacaggaaactgaatccgacctcacactgaccaaccaaaaaactgatgtg
atcgaaactgctgcaccacagagtactgaagagaaactggaagattcaccctgtcagatt
tttgatctcaagaagattattgaggagctttctaaccgactagagaagagagaatcacag
ttgcttgtcgtcagtaaagacaaggccagacttgaggaagagtgtgacaatctcaaagat
gagatgatcagcttgcgggaagaaagctctgctgttcagtctttaaaagacgagttcact
cagcggatagctgaagctgagaggaaagctcaacttgcctgcaaggagagagacatcgcc
aaaaaggaaatcaagggcctcagagaagaactggcaagcaggctaaactcaaatgagact
ttggaactgataaaagagaaagaggaacagatccgagagcttcttgaagaaggtgagaaa
ctgtccaagcagcagttgcagcactctaacatcataaagaaactgcgtgtgaaagagaga
gagagtgatgcacaaatcaccaaacagaccaaaaaactaaaggaacaggacgaggagcta
aaaaatttgcaacaggttttggatggtaaggaggaagtagaaaagcagcacagagagaac
attaagaagctgaatgctgtagtggagcggcaggagaaggaattgagtaaactgcagatc
agcagcgaggagcttcaggaaaataatcgcagtttacaagcagcactcgacagctcctac
aaaaagttggcagagttgcacaaggccaatgccactaaggatagcgaagcccaggaactg
gctctgagcagagaggtacatgcaaaagaagagctgagtttggctttggagaaagtcaaa
gaagagtcacgcctacaacaagaggcactggccgatcaggtggcagatttgaggctggct
cttcagagggccgaacagcagcaggccaagaaggaagattacctgagagaggagatcagt
gagctacagcagaggctacaagaagcggagaccagaaaccaggaacttagccaaagtgtt
acatcagcatcacgacccctcttgcgacagatagagaacctccaggccacacttggtgcc
cagactacatcatgggaaaaactagagaagaacatctctgaccgcttagctgatgcccaa
gcccagcttgctgtttctatagagaaagagcgttcggctacagaggagctactagccatc
cgagcacaaatagcatctttagaatcccaggcttctttgttgaggcaggagaaaggacgc
ctacaggggcagctggatgcggagaagttgcggcgggaaaaactggaggatgactttagc
agagagcgtgtagagctggagaatcttaaatgggaatatgctcgagtctcagaagaggcc
aagaaggagaagttgcttctcgctaaccaactggaaatggagaaaatgaaagtggaacag
gaaaagaagaaatgctaccttgcacaagaggccctcaaagaaaaggagaggaagtctcta
agtttgtctgtgactgatgctccagcgtcctccactccctcattgtcccgctctagttct
gttagtggggctgagcatgctggcttaccatcctccgttttctcacagcaggaggattct
ctcgaccattcttttagcactatgaccatgtctatcagtgggactaacctttatgaagcg
gctcgactgggtggcggatccagtatcattgagagcctgcagtcccagctcaaactcaga
gagggcgagatagcccagctgcagatggagatcgctagtctagagagaagtcgaactgtg
atggcagaagagcttgtgcgactgaccaatcagaacgatgagatagaggatgaagtgaag
gaaatccctaaactgaaagtgcaactgaaggatctacaacaaaggcacaacacaatcctg
cagatgtatggagagaaggcggaggaggcggaagagctgcgtctggacctggaggatgta
aagaacatgtacaaaacgcaaatagatgaactcttaaaaaatcaaaaataa
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integrated database retrieval system
