Pimephales promelas (fathead minnow): 120480505
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Entry
120480505 CDS
T08155
Symbol
tmc6b
Name
(RefSeq) transmembrane channel-like protein 6b
KO
K21988
transmembrane channel-like protein
Organism
pprm
Pimephales promelas (fathead minnow)
Brite
KEGG Orthology (KO) [BR:
pprm00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pprm02000
]
120480505 (tmc6b)
03037 Cilium and associated proteins [BR:
pprm03037
]
120480505 (tmc6b)
Transporters [BR:
pprm02000
]
Other transporters
Pores ion channels [TC:
1
]
120480505 (tmc6b)
Cilium and associated proteins [BR:
pprm03037
]
Other cilia and associated proteins
Stereociliary proteins
120480505 (tmc6b)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TMC
TetR_C_19
Motif
Other DBs
NCBI-GeneID:
120480505
NCBI-ProteinID:
XP_039529642
LinkDB
All DBs
Position
Unknown
AA seq
817 aa
AA seq
DB search
MAGRVGFHSDLVTDIESPADEEGVHDSFCQLIEEQSQDHHDDIEMTSLELEEESRDDVMR
LESPVYLRCDSEQPQQTQPLVEGRWSSDTLKVLSSMPSRTIGRSRGAIISQYYNRTLQLR
RRRQSRPSIQHFPRSARPSIRGHRVETDADEHEEDDNKRERLVNNLQNLSASDRVRMLRA
MPLSLAEKKELRMLVLNKAEHSLSQSQIPCCSQLKYYIIIAVRHGWYGWLSFLSSLQLWQ
TALKCVGGRFGTGVLSYFLFLRTLLFFNVFLFLVTGLFLVVPQAVVVPDRDQNTSVASLW
GLEVLTGAGYFSDSLLYYGYYSHRTLQAKRRCSGTGNGTSCEYGLSYNVPLVYFFTIGAA
FFITCIILVYTMSKSFGRSFRIDKSKGLLAIKVFSSWDFKVSKKSSVRLQRANIGTQLKE
LVAEVNREELKFSVLQRLFRFFIHMLAWIMCLGSTLACVLAVFYFSEYMHKKAAKGTGSS
DGLLLKEASLLAVPVLVSAINLILPGFFNAVAWMEEYDSPSVLNYVSIGRNLLLKVSVLG
VLCHHWLGRVASDPKTLGLQCWESFVGQELYRFLLMDFIFMLLDTFFGEFLWRLFSQKAL
KRKRKPVFDIARNVLELIYGQTLAWLGVLFSPLLPVVQIIKLLFLFYMKKVSLMMNCQAS
GKPWRASQMTTIFITLLCFPSFLGASVCVTYTMWTVKPSAGCGPFRGLDTMFQAGKRWVQ
ELAAENPNLSWLASAHTYLVENPLFLFLCAAIFLIVIYFHSQVVDGQRKIIELLQEQIEN
EGGDKKFLITRLQDIHERKRVVSPRRVRGASEDSSYS
NT seq
2454 nt
NT seq
+upstream
nt +downstream
nt
atggccggcagagtcgggttccactcggatctggtcaccgatatagagagtcccgctgac
gaagagggggttcatgactccttctgtcagctgatcgaggaacagagtcaggaccatcat
gatgatatcgagatgacctcgctggagctggaggaggagagcagagatgacgtcatgcgt
ctggagagtccggtgtaccttcggtgtgacagtgagcagccgcagcaaacgcagcctttg
gttgaaggacgctggtcatctgacacactcaaagtcctgtcctccatgcccagccgcacc
atcggccgcagtcgaggcgcgatcatctctcagtattataaccggaccctgcagctgcgc
agacgcagacagagccggccctcgatccagcacttcccgcgctccgccagacctagcatc
cgcggacaccgcgtggagacggacgcggacgagcacgaggaggacgacaataagagggag
cgattagtgaataatctgcagaatctgtcggcgagtgatcgtgtgcgaatgttgagagcg
atgccactgagtctcgcagagaagaaagagctcaggatgttggtgttgaataaagccgaa
cactctctgtcccagagtcagattccctgctgcagtcagctcaagtattacatcatcatc
gcggtgcgccacggttggtacggctggctgtcgttcctgtcctcgctccagttgtggcaa
acggctctgaagtgtgtcggcggtcgcttcgggacgggcgtcctgtcgtatttcctcttc
ctccgaacgctcctcttcttcaacgtcttcctgttcctggtcacgggtttgttcctggtg
gttcctcaggccgtcgtggttccggatcgggaccagaacaccagcgtcgccagcttgtgg
gggctggaggtgctgacgggcgccggttatttctcagactctctgctgtattacggttac
tacagtcatcgaacactacaagcgaaacgcaggtgctctggaacagggaacgggacgtcg
tgtgaatatggactgtcctataacgtgcctctggtttacttcttcaccatcggcgctgcg
ttcttcatcacctgcatcatcctcgtctacaccatgtccaagtccttcggccggagcttt
cgcatcgataaatctaaaggcctgttggccataaaggtgttcagctcgtgggactttaaa
gtcagcaagaaaagctccgtcagactccagcgagcgaacatcggcacacagctcaaggag
ctggtggcagaagtgaaccgtgaggagctgaagttctcggttctccagcgtttattccgc
ttcttcatccacatgctggcgtggatcatgtgtttgggaagcacgctggcgtgtgttctg
gccgtcttctacttctctgaatacatgcataagaaagccgctaaaggcacgggctcgtct
gacgggctgttgctgaaggaggcgagtctgctggccgttcccgtcctcgtgtccgccatc
aacctgatcctgccggggttcttcaacgccgtggcctggatggaggagtacgattctccc
agcgtgctcaactacgtctccatcggcaggaacctgttgttgaaagtgagtgtgttggga
gtgctgtgccatcattggttgggtcgcgtggcatcagaccccaagacgctgggcttacag
tgctgggagagtttcgtcggtcaggaactgtaccggtttctcctgatggacttcatcttc
atgttgctggacactttctttggggagtttctgtggaggttgttttctcagaaagctctg
aagaggaagaggaaacccgtgtttgatatcgcgaggaacgttctggagctcatctatgga
caaactctggcctggttgggcgtgttgttctctcctctcctgcctgtggttcagattatt
aaactgctgtttctcttctacatgaagaaggtcagtctgatgatgaactgtcaggcgtcg
gggaagccgtggcgagcctctcagatgaccaccatcttcatcacactcctgtgcttcccg
tcgttcctgggcgcctccgtgtgtgtgacctacaccatgtggacggtgaagccgtcggcc
ggttgcggcccgttccgtgggctggataccatgttccaggccgggaagcggtgggtccag
gagctggcggcggagaaccccaatctgtcctggctggcctcggctcacacgtacctggtg
gaaaaccctctcttcctgttcctgtgcgccgccatcttcctgatagtgatttacttccac
agtcaggtggtcgacggtcagcggaagatcatcgaactccttcaggaacagatcgagaat
gagggcggggataagaagtttctgatcacgcgactgcaggacatccatgagcgcaagcgt
gtcgtttcacctcgccgcgtacgaggagccagcgaggactccagttattcgtga
DBGET
integrated database retrieval system
