Pimephales promelas (fathead minnow): 120480514
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Entry
120480514 CDS
T08155
Symbol
usp48
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 48 isoform X1
KO
K11858
ubiquitin carboxyl-terminal hydrolase 48 [EC:
3.4.19.12
]
Organism
pprm
Pimephales promelas (fathead minnow)
Brite
KEGG Orthology (KO) [BR:
pprm00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
pprm01002
]
120480514 (usp48)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pprm04121
]
120480514 (usp48)
Enzymes [BR:
pprm01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
120480514 (usp48)
Peptidases and inhibitors [BR:
pprm01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
120480514 (usp48)
Ubiquitin system [BR:
pprm04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
120480514 (usp48)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UCH
UCH_1
DUSP
ubiquitin
DUF4808
Motif
Other DBs
NCBI-GeneID:
120480514
NCBI-ProteinID:
XP_039529666
LinkDB
All DBs
Position
Unknown
AA seq
1045 aa
AA seq
DB search
MAPRLQLEKAAWRWAETVKPEDITREHIELAYRIAVLPCKRGACRRNCKGNPNCLVGIGE
QSWLGEIDENTFHNIDDPNSERRDKNTFVGLTNLGATCYVNTFLQVWFHNLELRRALYRF
QNSRAEGHNTDSDYEPRTICEHLQYLFALLQNSNRRYIDPSGLVKALGLDTGQQQDAQEF
SKLFLSLLEDTLSKQKDPNLQNVIQQQFCGQFSYVTVCNKCGRESPLPSRFYELELNIQG
HKNLTECVTEFLKEEKLEGDNRYYCESCQSKQNATRRIKLQSLPRTLNFQLMRFVFDRQS
GHKKKLNTFISFPEVLDMGPFLEGKEEKCTYELTAVLIHRGVSAYSGHYIAHVRDAHTND
WYKFNDEEIEKMEGKKLQLGVEEDIAETGKSQTRKPKCSKGYHCSRNAYMLVYQQQMEEI
DQTEINVEVPAFLHKLVEQDNKKFEEWCNEMADMRKQSVDKGKAKHEEVKELYELLPAED
GQSYEFVPLEWLKKWLDDSTATKEIDNSQFLCSHGKLHPDKIGEAKRISLKAANLLFDRY
GGGPRLDWSYLCRDCVTQRCRVIRLKNQLNEDYKEVTNFAKASLKSDESGFWIGKASLRS
WRQLALDQLEEDEEETKHNNSKMNGEKSSSPADGSKGDSDERDGEEMKNFNEDILCYHGG
LSILENDRRLVSAEVWNKLRMYFPKAPEFAQHHEPCQQCMRLDREGKENEALNRMMANEQ
KSSLLNLFQEKNRPTLQKWPQDTDVLYIVPLYFVEEWRKFIRRPAKSNPVSNVGNSILLC
PHGGFMFTYDSMLQGDAQHIALLWPAEWDVIYKMFLVDHVISIYQIHDKTQDNGIVKYQT
HPDLCRECREGFIFQQQRDMREYAQATVYVRKVIDKKMMIKESAPEFSVSGSDVEDEREE
PKIDGEKDPDFSQSEGGAKRQKLNDTVSLSTPAVASASKSGIRRSTRHRKLRGEKALIVS
ANQTLKELKIQIMHAFSVAPFDQNLSIDGRCLTDDSATLGSLGVIPESIICLKADEPIAD
YAAMDDVYQVCMPEEGFKGTGLLGH
NT seq
3138 nt
NT seq
+upstream
nt +downstream
nt
atggctcctcggttgcagctggaaaaagctgcgtggcggtgggcagagacagtcaaacca
gaggacatcacacgtgaacatatcgagttagcttataggattgcagtgctgccttgcaaa
agaggggcatgcaggaggaactgtaaagggaatcccaattgtctcgtcggtattggggaa
caatcatggttaggagaaattgatgaaaataccttccacaacatcgatgacccgaactca
gaaagacgagataagaacacatttgtgggcctgacgaatcttggcgccacatgttacgtg
aacactttcctccaggtgtggttccacaatctggagctccgcagagccttatatcgattt
caaaattccagagctgaaggacacaacacggattcagattatgagccacggacgatatgc
gaacatctccagtatctgtttgcattgctacagaacagcaacagacgctatatcgacccc
tcagggctggtgaaggctcttgggcttgatacagggcaacagcaggatgctcaggaattc
tctaaactcttcctatcacttcttgaagacacactttcaaagcagaaggaccctaatctc
caaaatgtcatccaacagcagttctgtgggcagttctcttatgttactgtatgcaacaaa
tgtggacgtgagtctcctctaccatcacgattttatgaactggagctgaacattcaagga
cataaaaacctcacggagtgcgttacagagtttttgaaggaggagaagctggaaggtgat
aatcgttactattgcgagagctgtcagagtaaacagaacgccacccgtcggatcaagctc
cagagtcttccccgcactctcaactttcagctcatgcgatttgtttttgataggcaaagt
ggtcataagaagaaacttaacaccttcattagttttccagaagttcttgatatggggccg
tttttggaaggaaaagaagagaagtgcacgtatgaactcaccgccgtgctgattcatcgt
ggtgtgagcgcatactctggtcactacattgctcacgttagagatgcccatacgaatgac
tggtacaaattcaatgatgaggagatcgagaaaatggagggaaagaaacttcagcttggc
gttgaagaagacattgccgagacgggcaagtctcaaacccgaaagccaaaatgtagcaaa
ggctatcactgctcgagaaacgcatacatgttagtgtaccaacagcagatggaagagatt
gaccaaacagaaattaacgttgaagtaccagcttttctccataagctagttgaacaggac
aacaagaagtttgaggagtggtgcaatgagatggcagacatgcgaaaacagagcgttgac
aaaggcaaagccaaacatgaggaggtgaaggagctctacgaattgttacccgcggaagac
ggccagtcgtatgagtttgtgcctctggagtggctgaagaaatggcttgatgactccacg
gccaccaaggaaattgataacagccaattcctttgctcccatggcaaactgcacccagac
aagattggcgaggccaaaagaatatccttaaaggctgccaatctccttttcgaccgctac
ggaggaggacccagattagactggtcatacctctgcagagactgtgtcactcagcgatgc
agggtaatcagactgaaaaatcagctaaatgaagattacaaagaggtcacgaattttgcc
aaagcctctttgaaaagtgatgaatcagggttctggatcggtaaggcttctctaaggagc
tggagacagttggcattagaccagctagaagaggatgaggaggaaaccaaacacaacaac
agcaaaatgaacggagagaaaagcagcagcccagctgatggaagtaaaggagatagtgac
gaaagggacggtgaagagatgaagaactttaatgaagatattctctgttatcatggtggt
ttgagtatactagagaatgacaggcggctggtctcagcagaagtgtggaataaactacgg
atgtatttccccaaagcaccggagttcgcgcaacatcacgagccctgtcagcagtgcatg
aggctggatagggaagggaaagagaacgaggctttgaacagaatgatggcaaatgaacag
aagagctccctgctcaacctcttccaggagaaaaatcggcccacgctgcaaaaatggcca
caggacacagatgttctgtacattgtacccctttactttgtagaagaatggaggaaattt
atcaggaggccagcaaagagtaacccagtgtccaatgtggggaacagcatcctgctctgc
cctcacggtggcttcatgttcacctacgactccatgctgcaaggagacgcccaacatata
gctcttctctggcctgctgaatgggacgtgatctacaaaatgtttctggtggaccatgtc
atctccatatatcagattcatgataaaacgcaagacaacggcattgtgaaataccaaact
catccagatttgtgtcgagaatgcagagagggcttcatattccagcagcagagggacatg
agggagtacgcgcaggccactgtgtatgttcgcaaagtcattgacaagaaaatgatgatt
aaggaatctgcccctgagttcagtgtgagtgggtcagatgttgaggatgaaagagaagag
ccaaagatagatggagagaaagatccagacttcagtcagtctgagggcggagccaaacgg
cagaagctaaacgacaccgtctctctctctacacccgctgttgcctctgcttccaagtcg
ggcatcaggaggagcacaaggcacaggaaactccgtggggagaaagccctcatcgtctct
gccaaccagacgctcaaagagcttaagatccagatcatgcatgcattctctgtggctcca
ttcgaccaaaacctttccatagacggacgctgtttaacagatgactccgccacactagga
agtcttggagtcatcccagagagcatcatttgccttaaggctgatgaacccattgctgat
tatgctgcaatggatgatgtttatcaagtctgtatgcctgaagaaggatttaaaggcact
gggttattaggacactga
DBGET
integrated database retrieval system
