Pimephales promelas (fathead minnow): 120480602
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Entry
120480602 CDS
T08155
Symbol
srp54
Name
(RefSeq) signal recognition particle 54 kDa protein
KO
K03106
signal recognition particle subunit SRP54 [EC:
3.6.5.4
]
Organism
pprm
Pimephales promelas (fathead minnow)
Pathway
pprm03060
Protein export
Brite
KEGG Orthology (KO) [BR:
pprm00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03060 Protein export
120480602 (srp54)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
pprm02044
]
120480602 (srp54)
Enzymes [BR:
pprm01000
]
3. Hydrolases
3.6 Acting on acid anhydrides
3.6.5 Acting on GTP to facilitate cellular and subcellular movement
3.6.5.4 signal-recognition-particle GTPase
120480602 (srp54)
Secretion system [BR:
pprm02044
]
Sec (secretion) system
Prokaryotic Sec-SRP core components
120480602 (srp54)
Eukaryotic Sec-SRP protein
120480602 (srp54)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SRP54
SRP_SPB
SRP54_N
CbiA
cobW
nSTAND3
AAA_33
NPHP3_N
DUF2209
MeaB
AAA_17
ResIII
SRPRB
nSTAND_NTPase5
MobB
AAA
AAA_22
APS_kinase
AAA_19
Zeta_toxin
PduV-EutP
AAA_30
nSTAND_NTPase7
6PF2K
ATP_bind_1
AAA_31
Thymidylate_kin
AAA_18
Torsin
KTI12
AAA_16
ArsA_ATPase
Motif
Other DBs
NCBI-GeneID:
120480602
NCBI-ProteinID:
XP_039529798
LinkDB
All DBs
Position
Unknown
AA seq
504 aa
AA seq
DB search
MVLADLGRKITSALRSLSNATIINEEVLNAMLKEVCAALLEADVNIKLVKQLRENVKAAI
DLEEMASGLNKRRMIQHAVFKELVKLVDPGVKAWTPTKGKNNVIMFVGLQGSGKTTTCSK
LAYYFQRKGWKTCLICADTFRAGAFDQLKQNATKARIPFYGSYTEMDPVVIAAEGVEKFK
TENFEIIIVDTSGRHKQEDSLFEEMLQVSNAVQPDNIVYVMDASIGQACEAQAKAFKDKV
DVASVIVTKLDGHAKGGGALSAVAATKSPIIFIGTGEHIDDFEPFKTQPFISKLLGMGDI
EGLIDKVNELKLDDNEELIDKLKHGQFTLRDMYEQFQNIMKMGPFGQIMGMIPGFGTDFM
SKGNEQESMARLKKLMTIMDSMNDQELDNKDGAKLFSKQPNRIQRVARGSGVATRDVQEL
LTQYTKFAQMVKKMGGIKGLFKGGDMSKNVNPSQMAKLNQQMAKMMDPRVLHHMGGMAGL
QSMMRQFQQGAAGNMKGMMGFNNM
NT seq
1515 nt
NT seq
+upstream
nt +downstream
nt
atggttttagctgatctcgggaggaaaataacctcagctttgaggtctctgagcaatgcc
accattatcaatgaggaggtattaaatgctatgctcaaggaagtctgtgctgccctgctg
gaggctgatgtgaatatcaagttggtaaagcagcttcgagaaaatgtcaaggcagccatt
gacctggaggagatggcctctgggctgaacaagagaagaatgatccagcatgctgttttc
aaggaacttgtcaagctggtggatcctggagtcaaagcctggactcccacaaagggaaag
aacaacgttatcatgtttgtgggtctgcagggcagtgggaaaaccacaacatgttcaaag
ttggcatactacttccaaagaaaaggatggaaaacatgtttgatttgcgccgacacattc
agagcaggtgccttcgaccaactcaagcaaaatgcaacgaaagccagaatacccttttat
gggagttacacagaaatggatccagtggtcatagctgcagagggtgtggaaaaattcaag
acagaaaactttgaaataatcattgtggacactagtggtagacataaacaggaggactca
ctttttgaggaaatgcttcaggtgtcgaatgctgtgcaacctgacaacatagtgtatgtg
atggatgcctccattggtcaggcttgtgaggctcaggctaaggccttcaaagacaaagtc
gatgtggcttctgttattgtcaccaaactggacggccatgccaagggtggtggtgcactc
agtgctgtggcggccacaaagagtcccatcatttttatcggcacaggcgagcacattgac
gacttcgaacctttcaagactcagcccttcataagcaaactgctcggtatgggagatatt
gagggactgattgacaaagtgaacgaactaaagcttgatgacaacgaggagctaattgac
aaactgaaacatggtcagtttacactcagggacatgtatgaacagtttcagaacatcatg
aagatgggaccttttggtcagatcatgggcatgatcccaggctttggaacagatttcatg
agcaaaggaaatgagcaggagtcaatggccagactaaagaaactcatgacaataatggat
agcatgaatgaccaggaactcgacaacaaggatggtgccaagctattcagtaaacagccc
aaccgcatccagcgagtggcccggggatcaggagtggctaccagggatgttcaagagttg
ctcacccagtacacaaagtttgcgcagatggtcaagaagatgggaggcatcaaaggcttg
tttaaaggaggggacatgagcaagaacgtcaacccgtcacagatggcgaaactgaaccag
cagatggctaaaatgatggatcccagagtgcttcatcacatgggtggcatggctggactg
cagtccatgatgaggcagtttcagcagggagctgctggcaacatgaaaggcatgatggga
tttaacaacatgtga
DBGET
integrated database retrieval system
