Pimephales promelas (fathead minnow): 120480612
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Entry
120480612 CDS
T08155
Symbol
taf4a
Name
(RefSeq) transcription initiation factor TFIID subunit 4 isoform X1
KO
K03129
transcription initiation factor TFIID subunit 4
Organism
pprm
Pimephales promelas (fathead minnow)
Pathway
pprm03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
pprm00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
120480612 (taf4a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pprm03021
]
120480612 (taf4a)
03036 Chromosome and associated proteins [BR:
pprm03036
]
120480612 (taf4a)
Transcription machinery [BR:
pprm03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
120480612 (taf4a)
Coactivators
SAGA/TFTC/STAGA complex
120480612 (taf4a)
Chromosome and associated proteins [BR:
pprm03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
TFTC complex
120480612 (taf4a)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TAF4
TAFH
AAA_23
tRNA-synt_1c
Motif
Other DBs
NCBI-GeneID:
120480612
NCBI-ProteinID:
XP_039529808
LinkDB
All DBs
Position
Unknown
AA seq
820 aa
AA seq
DB search
MVTTLIGTSTVQTLNGGNAMDSHTESGTPVSSGPTSSSSSPPPPSDEASTSVPVVNNGPV
VAKGHGNITVAPSPNTVIQSYGNPPASASSSAGPSVTVVRPSMQTAGTGLTINGSNNNTT
VANVATPGLTNVTTTTTSTTTTTPLLMNQTPVSISVSKSESPKTIIQSAGGMTLSPGVVK
GAVLQGGARTAAPATVAASSPAIRAIAPQVLAPRLPQSNPGQNIQNIQLPPGMVLVRSDS
GQLLMIPQQMLAQMQAQSQAARPAAPTSTTPGQITSGQAPGTPLMARQVTPTTIIKQGSP
TPSSTATTTLQRPPVQQASSVGAVLSVQAGTAQRTVTAATGTTVSSATETMENVKKCRNF
LSTLIKLATSGKQSSETVANVKELVKNLLEGAIEAEEFTSRLYKELNSSPQPYLVPFLKR
SLPALRQLTPDSTAFIQQSQALQASAVLLTGSNTTGATATAPRTLIQPALSNSSQTASLV
LQPPQQGAIVKPPQVTLTTTPMVTLRGQPHSHIVVGQPQVHLKQIQTVAVKQGMVSSTKL
AHGSVSVAIAQKNKAKDGAGGTFRDDDDINDVASMAGVNLSEESARILATNSELVGTVTR
SCKDEAFLSASMLQHKILEIGQRFGVTELGPEVVNIVSHATQQRLQNLLEKVSLIAQQKN
MTYKEDSRYEQVEDVRSQLKFFEQLDQLEKQKKEEQEREILMKAAKSRSRQEDPEQLRLK
QKAKEMQQQELAQIRQRDANLTALAAIGPRKKRKLDSPSFGNDAEGSGLCASASGGLNAG
VSRQFTRHRITRVNLRDLLFCLENERSTSHSQLLYRALLK
NT seq
2463 nt
NT seq
+upstream
nt +downstream
nt
atggtaactactttgatcgggacgtccacagtgcaaactttgaacggaggcaatgcaatg
gattcgcacactgaaagcggcactccagtgtccagtggcccaacatcatcatcatcatca
ccaccaccaccatcagacgaggcttcaacttctgtaccagttgttaataacgggcccgtg
gtggcgaaaggacacggaaacattactgtcgccccaagcccaaacacagtgatacagtct
tatgggaatcctccagcatccgcatcatccagtgcaggaccctcggtgacggttgtcaga
ccatctatgcaaactgctggaacaggtttaactattaacgggagtaacaataatacgact
gtagccaatgtagcgaccccgggtttaactaacgttactactactacaacttctactact
acaacgacacctcttttaatgaaccagactcctgtctccatctctgtgagcaagtccgag
tcccctaaaactattatccagtccgccggcggcatgactctcagtcctggagtggtcaag
ggggctgttttgcaggggggtgcgagaacagcagctccggcaactgttgcagcatccagc
cctgccatcagggccatcgcgccacaggtgttagcgccccgactccctcagagcaacccg
ggccagaacatccagaacattcagctacctccaggtatggtgttggtgcgtagtgacagt
ggtcagttgctgatgatccctcagcagatgttggcacagatgcaggcgcagtctcaggcc
gcccgccctgctgcccctaccagcaccacccctgggcagatcacctctggacaggcacct
ggaactcccctaatggcccgacaggtgacccccaccaccatcataaagcagggctctcct
acacccagcagcacggcaactaccacactccagagaccacctgtacagcaggcctcctct
gtgggtgctgtgttgtcagtgcaggcgggaactgcccagaggactgtgactgctgccacg
gggaccaccgtctcctcagcaacggagacaatggagaatgtaaagaaatgtaggaacttc
ttatccacgctgataaagctggccactagcggtaagcagtcatcagagactgtcgccaat
gttaaagagctggtcaagaacctgctggaaggggcgattgaagcagaggagttcaccagc
aggctctacaaagagctcaactcgtctcctcagccttatctagtgcctttccttaagagg
agtcttccagctctgcgacagctcactcctgactccacagcctttatccagcagagccag
gccctccaggcatctgctgtgttgctgaccggctccaacactactggagccaccgctaca
gctcctcgcacgctcatccaacctgccctcagcaactccagccaaaccgcctctctggtg
ttgcagcctccacagcagggggcaatagtgaagcccccacaggttaccctgacaaccact
cccatggtaacgctcaggggtcagccccacagccacatagtggtgggtcagcctcaggtg
catctcaaacagatccagacagtggcagtgaagcagggtatggtgagtagcactaaactg
gctcacggctccgtgtctgtagcgatagctcaaaagaataaagccaaggatggtgctgga
ggaactttcagggatgatgacgacattaatgatgtggcatcaatggctggcgttaatctt
tcggaggagagtgcccgtatcctggccaccaactctgagctggttggcacggtcacacgg
tcttgtaaggatgaagctttcctctccgccagtatgctacagcataagattctagagata
ggccaaaggtttggagtgacagagctgggtcctgaggttgtgaacatcgtctctcacgcc
actcaacagagactgcaaaaccttctagagaaagtctcattgatcgcccagcaaaagaac
atgacttacaaggaagacagtcggtatgagcaggtggaggatgttcgctctcagctgaag
ttctttgagcaacttgaccagttggagaaacaaaagaaagaggaacaggagagagaaatt
ttaatgaaggcagctaagtcacgctcacgacaagaggaccccgagcagctgcggctgaaa
cagaaggccaaagagatgcagcagcaggaattggctcaaattcgacagagagacgccaac
ttgacggcgttagcggctatcggacccagaaagaaaagaaaactggattctccttcgttt
gggaatgacgcagagggctcaggtttgtgcgcaagtgcatccgggggcttaaatgcagga
gtgtcgaggcagttcactcgccatcgcatcacgcgtgtaaacctcagggatctgctcttc
tgtctagagaacgagagaagcaccagccactcacaactgctctaccgagcccttctcaaa
tag
DBGET
integrated database retrieval system
