Pimephales promelas (fathead minnow): 120480620 Help Entry 120480620         CDS       T08155                                  Symbol pcdh17 Name (RefSeq) protocadherin-17 isoform X1   KO K16499   protocadherin delta 2 Organism pprm  Pimephales promelas (fathead minnow) Brite KEGG Orthology (KO) [BR:pprm00001]  09180 Brite Hierarchies   09183 Protein families: signaling and cellular processes    04515 Cell adhesion molecules [BR:pprm04515]     120480620 (pcdh17) Cell adhesion molecules [BR:pprm04515]  Cadherins   Protocadherins    120480620 (pcdh17) BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  Cadherin Cadherin_2 Cadherin_CELSR2_9th Cadherin_C_2 Fibulin_C Motif Other DBs NCBI-GeneID:  120480620 NCBI-ProteinID:  XP_039529818 LinkDB All DBs Position Unknown AA seq 1137 aa AA seqDB search MHLSVFLFLLLWAQALTLKNLNYSIPEEKIQGVIGNIAKDAELELGEQGKKSNFRVLENS APHLIDVDPESGLLYTKQRIDRESLCRQNSKCQLSMEVFANDKEICMIKVEIQDINDNAP TFPSDQIDIDISENAAPGTRFPLAAAYDADTRENGLKTYQITRDDYSIFSLDVKSRGDGT KFPELVVQRSLDREERSHHTLIITATDGGEYPKSGTMQINVKVTDSNDNSPVFDQPSYVV EIPENAPLGTVLIDLNATDTDEGINGQVTYSFSCYVPDRIKELFSIDPRTGVIKIQGKID FEENPIIEIDVQAKDQGPNPIPGHCKVTVKVLDRNDNWPSIGFVAVRQGAVSEAATPGTV IALVRVTDKDSGRNGQLQCRILGNVPFKLEENYDNFYTVVTDRPLDREVKDEYNISIVAK DNGNPPLNSTKSFTVKILDENDNAPRFTKMVYLLQVPENNIPGEYLGSVLAHDPDLGQNG TVSYSLLPSNVSEESITTYVNIKPTDGAIYALRSFNYEQTKYFDFKVQAKDSGNPHLESN TTVRVSVLDVNDNIPVIVLPLLQNDTAEIHVPRNVGVGHIITTVRAVDNDFGESGRLTYE ISDGNEEHLFEIDTVTGEVRTAQPLWEEVAPVVELIIKVTDHGKPSLSAMAKLIVKAYSG PLPEGEPRINAEHHNWDMSLPLIVTLSIISIMLLAAMITIAVKCKRENKEIRTYNCRIAE YTHPQLGKGKKKKLNKNDIMLVQSEVEERDTMNVMNVVSSPSLATSPMYFDYQTRLPLSS PRSEVMYLKPTANNLSVPQGHVGCHTSFTGPVTNTTETPVNRMSIIQTDNFPAEPNYMGN RQQFVQSSSTFKDPERASLRDSGHGDSDQADSDQDTNKGSCCDMSAKEALKMKATGLKPQ PLEQEEDCVNCTEECRVLGHSDRCWMPQFPVGAGGAGTPQAEGSDYRTNLFVPAGMEAVA VETETYETVCNPNGKKTFCTFGKERRDHTILVANVKPYLKTKRALSPLLQEVPSASCSPS KGCSTGSPCSSAKGMGDGAEGKPSTSHYGPPDGQYVSPNKQNKEQGYATLPPSDPVAKVL AEARSRISHETAVEMDSVLEQGGGEMGRGTMDADQVVRDIDKLLQDCRGNEKTPIRK NT seq 3414 nt NT seq  +upstreamnt  +downstreamnt atgcatctttctgttttccttttcctacttttatgggcgcaagccctgacgttgaaaaac ttgaactactcaatacccgaggagaaaattcagggcgtcattggaaacattgccaaggat gcggagctggaactgggagagcaggggaaaaaatccaacttcagggtgttggagaactcc gccccacaccttattgatgtggatcccgaaagtgggctcttatacactaaacagcggatc gacagggaatcactgtgcagacaaaactccaagtgccagctctccatggaagtgtttgcc aatgacaaggagatctgcatgatcaaagttgagatacaggacataaatgacaatgcacca acctttccttctgatcagatcgatattgacatatctgagaacgcagccccaggcacacgt ttccccttggctgctgcctacgacgctgacacgagggagaatggcctgaaaacatatcag atcacgcgggatgattacagtatattctctttggatgtcaaatccagaggggacggaact aaattcccagaattagtcgttcagaggtccttagatcgagaggaacgtagccatcacact ttgattataactgccacagatggaggggaatatcccaaatcaggcacaatgcaaatcaat gttaaagtcactgattccaatgacaacagccctgtgtttgatcagccctcgtatgtagta gagatccctgagaatgcgcccctgggcacagtattgatagatttaaatgctaccgatacc gatgaaggcatcaatggccaggtcacttattcttttagctgttacgtcccagacaggatc aaagagttgttctcaatagacccccgaacgggtgtcataaagatccagggtaaaatcgac tttgaggagaacccaattatagagattgatgttcaggcaaaggatcaaggccccaaccca attcctggccactgtaaagtcactgttaaagtgcttgacaggaatgacaactggccgtca ataggtttcgtagcggtgcgtcagggggcggttagtgaagcggcaactccggggacagtt attgcgctcgtcagagtcacagacaaagactcgggccgcaacgggcagctccagtgtagg attttgggaaacgttcccttcaagctggaggagaactatgataacttctacacagtagtg actgacagacctctggacagggaggtaaaagatgagtataacatttccattgtggccaaa gacaatggcaaccctcccctgaactcaacaaagtctttcactgttaagattttagatgaa aatgacaatgcgccccgcttcacaaaaatggtctaccttctccaggtgcctgaaaacaac atcccaggggaatacctgggttctgttctggcacacgacccagatttaggccaaaacggt actgtgtcctattccctccttccctcgaatgtaagcgaggagtctatcaccacatatgtt aacatcaaaccgactgatggtgcaatttatgccctgaggagttttaactatgaacaaacc aagtatttcgactttaaagtccaggcgaaggattccggaaaccctcacctggaaagcaac accactgtccgtgtgagcgtgctggatgttaatgataacattcctgtcattgtcctccca ttacttcagaacgacaccgctgagatccatgtacctcggaatgtgggagtcggacacatc atcaccaccgtgagagcggtggacaacgactttggtgagagcggtcggctcacctacgag atctcggatggcaacgaggaacacctgttcgagatcgacacggtgacaggcgaggtacgg acagcccagccactgtgggaggaggtggcacctgttgtggagctcatcattaaggtcact gaccatggcaagccgtcactttccgccatggccaaactcatcgtcaaagcctactcgggg cctttaccagagggtgaaccgcgcatcaacgcggagcaccacaactgggacatgtcgctc ccgctcatagtaaccctgagtatcatctcgatcatgctccttgcagctatgatcaccatc gcagtcaagtgcaaacgggagaacaaggagatccgcacatacaactgtcgcatcgccgag tacactcacccgcaactcggtaaaggcaagaagaagaagctcaacaagaacgacatcatg ctggtgcagagcgaagtggaggaacgggacaccatgaacgtgatgaacgttgtcagcagt ccctctctggccacctcgcccatgtactttgactaccaaacgcgtctgcccctcagctct ccgagatcagaggtcatgtacctcaaacccactgccaacaacctcagcgttcctcaagga cacgttggctgtcacaccagcttcaccggacctgttacgaacaccaccgagacgccagtg aacaggatgtcaataatacagacagacaattttcctgctgagcccaattacatgggtaac aggcagcagtttgttcaaagcagctccacgttcaaagatccagagcgagccagtctcaga gacagcgggcatggggacagcgaccaagcggacagcgatcaggacactaataaaggctcc tgctgtgacatgtccgctaaggaagcacttaagatgaaggccactggcctcaagcctcaa ccacttgagcaggaggaggattgtgtgaactgcacagaggagtgtcgagtgctgggtcac tcagaccgttgttggatgccccagtttcccgttggggccggaggagctggaactccccaa gccgagggctctgactaccgcaccaatctcttcgtccctgccggcatggaagcggttgca gtggagaccgagacttacgagacagtttgcaaccccaatggcaaaaaaactttctgcaca tttggaaaggagcgtcgggaccacaccatcctggtggcgaatgttaaaccctacctaaag accaaacgtgcccttagccctctcttgcaggaagtcccatctgcctcatgtagtccctcc aaaggctgtagtacaggttccccgtgctcttcggccaaaggcatgggtgacggagcagag ggcaagcccagcaccagccactacggacccccagatggacagtatgtctccccgaacaag caaaacaaagagcagggctacgccacgctgcccccctctgaccccgtggccaaagtcctg gctgaagcgcgttcacggatcagccatgagacggcagtggaaatggacagcgtcttggag cagggcggaggagagatgggccgtggcaccatggacgcagaccaggtggtcagagacatc gacaaactgctgcaggattgtcgaggaaacgaaaagacccccatcagaaagtaa

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