Pimephales promelas (fathead minnow): 120480665 Help Entry 120480665         CDS       T08155                                  Symbol hcfc1a Name (RefSeq) host cell factor 1a isoform X1   KO K14966   host cell factor 1 Organism pprm  Pimephales promelas (fathead minnow) Pathway pprm03083   Polycomb repressive complex pprm04980   Cobalamin transport and metabolism pprm05168   Herpes simplex virus 1 infection Brite KEGG Orthology (KO) [BR:pprm00001]  09120 Genetic Information Processing   09126 Chromosome    03083 Polycomb repressive complex     120480665 (hcfc1a)  09150 Organismal Systems   09154 Digestive system    04980 Cobalamin transport and metabolism     120480665 (hcfc1a)  09160 Human Diseases   09172 Infectious disease: viral    05168 Herpes simplex virus 1 infection     120480665 (hcfc1a)  09180 Brite Hierarchies   09181 Protein families: metabolism    01009 Protein phosphatases and associated proteins [BR:pprm01009]     120480665 (hcfc1a)   09182 Protein families: genetic information processing    03036 Chromosome and associated proteins [BR:pprm03036]     120480665 (hcfc1a)    03029 Mitochondrial biogenesis [BR:pprm03029]     120480665 (hcfc1a) Protein phosphatases and associated proteins [BR:pprm01009]  Protein serine/threonine phosphatases   Phosphoprotein phosphatases (PPPs)    Protein phosphatase-1     PP1-interacting proteins (PIPs)      120480665 (hcfc1a) Chromosome and associated proteins [BR:pprm03036]  Eukaryotic type   Histone modification proteins    HAT complexes     NSL complex      120480665 (hcfc1a)    HMT complexes     COMPASS/SET1 complex      120480665 (hcfc1a)     MLL-HCF complex      120480665 (hcfc1a)    Polycomb repressive complex (PRC) and associated proteins     PR-DUB complex      120480665 (hcfc1a) Mitochondrial biogenesis [BR:pprm03029]  Mitochondrial quality control factors   Regulator of mitochondrial biogenesis    Other regulator of mitochondrial biogenesis     120480665 (hcfc1a) BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  Kelch_3 Kelch_5 Kelch_4 Kelch_1 Kelch_6 fn3 Motif Other DBs NCBI-GeneID:  120480665 NCBI-ProteinID:  XP_039529905 LinkDB All DBs Position Unknown AA seq 1915 aa AA seqDB search MTSPGSVVPGTTGAALQPRWKRVLGWSGPVPRPRHGHRAVAIKELMVVFGGGNEGIVDEL HVYNTATNQWFIPAVRGDIPPGCAAYGFVCDGTRLLVFGGMVEYGKYSNDLYELQASRWE WKKLKPKAPKNGAPPCPRLGHSFSLVGNKCYLFGGLANDSEDPKNNIPRYLNDLYTLELR PGSNVVGWDIPVTYGVLPPPRESHTAVIYTEKTTKKSRLVIYGGMSGCRLGDLWTLDIDT LTWNKPAISGTAPLPRSLHSATTITNKMYVFGGWVPLVMDDVKVATHEKEWKCTNTLACL NLDALSWETVLMDTLEDNIPRARAGHCTVAINNRLYVWSGRDGYRKAWNNQVCCKDLWYL ETERPNPPSRVQLVRANTNSLEVSWGAVSTADMYLLQLQKYDIPTATAATSPALNAAPSL PGNSPKSPAPAAAAPSAQSLPHSGITFVPQAASPTASVLPTTPASPLAASTARGPAILKV AAPQSGTGASIVTVRQASQAGKSPVTVTSLPAGVRMVVPPQTTQGTVIGSSPQMSGMAAL AAAAAATQKIPPSPGATVLSMPAGATIVKTMAMTPGSTTHPTTVKVASPVMVSNPATRML KTAAAQVGTPTVSSSNTGARPIITVHKSGTVTVAQQAQVVTTMVGGVTKTITLVKSPLSM GGNLISNLGKMVSMVQTKPVQTAALTGQASSNPLAQILQSKGTLPPGTILKLVTSADGKP TTIITTSQAGGTGNKPTILGISGMSPTTNKPGTTTIIKTIPMSALQQGAAGVTSSTGMKS PITIYTTKVMTSGTGTPGKFITAMPKIGTAGGQQGLTQVVLKGAPGQPGTILRTMPMGGV RLVSPVSGVKPTVTTLVVKGTTGVTTLGTVTGTVSTSLARGSLASANATLSNPITTLGTI ATLSNQVINATAVSAAQTNLTTVTSNMQPTQVTLITTPTGVEAQPGQDLPVSFLASPTSE QPTSTESGAGEASGTVTLVCSNPPCETHETGTTNTATTATANMGTGPAGTVQRVCSNPPC ETHETGTTNTATTASANMGGVQRVCSNPPCETHETGTTNTATTASSSMGTAPASIVQRVC SNPPCETHETGTTNTATTASSNMGGNQTGQVQRVCSNPPCETHETGTTNTATTASSNMGG NQTGQVQRVCSNPPCETHETGTTNTATTASSNMGGNQTGQVQRVCSNPPCETHETGTTNT ATTASSNMGGNQTGEVQRVCSNPPCETHETGTTNTATTASSNMGGNQTGEVQRVCSNPPC ETHETGTTNTATTASSNMGGNQTGEVQQSVCSNPPCETHETGTTNTATTATCSMETDEGT AQQSEEASESATSTEGLPSTVAPQSRAITTVTQATPLPGPAVPSISSITESSSEAGVESV VMESSEAESLQTEGQAEAEAVAMQAGLEAEAEAVAMPSDFQPEAVALPSDFQGEAMAEAM EAESQAEAEAVPMEHDASSMAGGETAQEQLPTAEMEGVDAASASQAEALALPPELMSDVQ PTTLMVTGLTPEELAVTAAAEAAAQAAATEEAQALAIQAVLQAAQQAVMSSGDGDAGEDQ QTHTIPIVLTQQELAALVQQQQQLQAAQQLAAAQAALPTEGLAPADSLNDPSSESNGHNE MAAAATSAVVGLLPRTTAETLAPSSTLAPVVVSSPAKMQAAAALTEVANGIQAGRQNPPT VTVKPQVKKENQWFDVAIVKVTNMVVTHFYMPADDSTYVEDDSGTIPDYSQMKKVELQPG TAYKFRVAGINTCGRGAFSEISAFKTCLPGFPGAPCAIKISKSPDGAHLTWEPPSMTSGK ITEYSVYLAIQSSQTTEAKPSAPAQLAFMRVYCGPNPSCLVQSSSLSNAHIDYTTKPAII FRIAARNEKGYGPATQVRWLQESNKDGLSAKPAPKRAVSSPDAKGIGQKKARMDQ NT seq 5748 nt NT seq  +upstreamnt  +downstreamnt atgacgtcccccggttccgttgtgcctggaaccaccggagctgcactgcagccgcgatgg aagcgggttctggggtggtccgggccggtaccccgaccgagacacggacacagagccgta gccatcaaggagttgatggtcgttttcggtggaggaaacgaaggaatcgttgacgagttg cacgtttataatactgcaacaaaccagtggttcataccagctgttcgtggagacattcct ccaggctgtgcggcttatggttttgtatgtgatggtacacgactattagtgtttggtgga atggtggaatatggaaagtacagcaatgacctttatgagttacaggcaagcaggtgggaa tggaaaaaattgaaaccaaaagcccctaaaaatggagcaccaccatgtccccgtctgggt cacagtttttctcttgtgggcaacaagtgctatctttttggggggcttgccaatgacagc gaagaccctaagaacaacattcccagatatttgaatgacctttataccctcgaactgcgt ccgggctccaacgttgtgggctgggatataccggtcacgtatggagtactgcctcctcca agagagagccacactgctgtaatttatactgaaaaaactactaagaagtcccgtcttgtt atatatggaggaatgagtggttgtcgtttgggagatctttggacattagatattgatacg ctgacctggaacaagcctgcaataagcggcactgctcccctcccccgtagcctccactca gccaccactattacaaacaaaatgtatgttttcggtggctgggttcccctggtgatggat gatgtgaaggtggccacacatgagaaggaatggaagtgtacaaacacgctggcctgcctg aacttggatgccttgtcatgggagaccgttttgatggacaccttggaggacaacatacca cgtgcacgagcaggacattgcactgttgccattaacaacagactttatgtctggagtgga cgtgatgggtaccgcaaagcttggaacaatcaggtgtgctgcaaagacttgtggtaccta gagacggagcgacctaatcctccttcacgggtacagctcgtccgggccaacacaaattct ttagaggttagctggggagcggtgtctacagcggacatgtacctgcttcagcttcagaaa tatgatatcccaacagcgactgctgccacatcaccagccctcaatgcagctccctccctc cctggaaactcgcctaagagtccagcgcccgctgcagctgctccgtctgctcagagtctg cctcatagtggcatcaccttcgtgccccaggctgcttcacccactgcctcagttttaccc accacgcccgcaagtcctctggctgcctcaacggctcgtggcccagctattctgaaagtc gcagcccctcagtcaggcaccggggcatcgattgtcactgtgcgccaagccagccaggct ggaaaatccccagtcactgtgacatcacttcctgcaggtgttcgcatggtagtgccacca cagaccactcaaggaacggtcatcggcagcagcccccagatgagtggaatggcagctttg gctgcagctgctgcagccacacagaaaatccctccttcccccggagccactgttctcagt atgccggctggggctacaattgtcaaaacaatggctatgacacctgggtccaccactcac cccaccacagttaaagtggcatcacctgtcatggtaagcaaccctgccactcgcatgctg aagaccgccgctgcacaggtgggcactccgacagtttccagttcaaatacaggtgctcga cccatcatcacagtgcacaagtccggcacagttactgtagcacagcaggctcaggttgtg accactatggtgggcggagtcaccaagaccatcactctagtcaagagtccactttccatg ggcggaaacttgatctctaacttgggcaagatggtgtcaatggtacaaaccaaaccagtc cagacagctgctttgactggacaggcctcctccaaccctctggctcagattttgcaatca aagggtacccttccacccggcaccattctgaagctggtaacatctgcggatggaaaacca actaccataattaccaccagtcaagccggtggcacaggaaataagcccactatcttgggc atcagtggcatgtcccccacaaccaacaaaccgggcactaccactatcattaaaacaatc ccaatgtctgctctacagcagggagctgcaggcgtgactagtagtactgggatgaagagc cccattaccatctacaccacgaaggtgatgacatctggaacaggaactcctggaaaattt attacagcaatgcctaagattggtacagcaggtggccagcaaggcctaacacaggttgtt ctaaagggagcccctggtcagcctggaaccattcttcgcaccatgccgatgggaggagtg cgtctcgtgtctccagtatctggggtcaagccaactgtaaccacgctggttgtcaaggga acaactggtgtaacaactcttggcacagtcacaggaaccgtttctactagcttagctaga ggaagcctagccagtgccaatgccactctgtcaaaccccatcaccactctggggacgatt gccaccctctccaaccaggtcatcaatgccactgctgtgtcagctgctcagaccaatctg accactgtcacctccaacatgcagcccactcaggtgactctcattactacacccactggt gtggaggctcagcctggccaagatctgcccgtttcctttctggcctctcccacgtctgag cagcccacctctactgagtctggtgcaggcgaagcttctggcactgttactctagtgtgc tccaaccccccctgtgagactcatgagacgggcaccactaacacggccaccacagcgacg gcaaatatgggcactggaccagctggcacagtacagagggtgtgctccaacccgccctgc gaaacgcatgaaacaggtacaacaaacactgccacaacagcatctgccaacatgggtggt gttcagagggtctgctcgaacccaccatgtgagacccacgaaacaggcaccaccaacaca gcaaccacagcatcttcaagtatgggtactgctcctgctagcatagtgcagagagtttgc tcaaacccaccctgtgagacccacgagacgggcaccaccaacacggccaccacggcttca tctaacatgggcggaaaccaaacgggacaggtgcagagagtttgctcaaacccaccctgt gagacccacgagacgggcaccaccaacacggccaccacggcttcatctaacatgggcgga aaccaaacgggacaggtgcagagagtttgctcaaacccaccctgtgagacccacgagacg ggcaccaccaacacggccaccacggcttcatctaacatgggcggaaaccaaacgggacag gtgcagagagtttgctcaaacccaccctgtgagacccacgagacgggcaccaccaacacg gccaccacggcttcatccaacatgggcggaaaccaaacgggagaggtgcagagagtttgc tcaaacccaccctgtgagacccacgagacgggcaccaccaacacggccaccacggcttca tctaacatgggtggaaaccaaacgggagaggtgcagagagtttgctcaaacccaccctgt gagacccacgagacgggcaccaccaacacggccaccacggcttcatctaacatgggtgga aaccaaacaggagaggtgcagcagagtgtttgctcaaatccaccatgtgagacccacgag acgggcaccaccaacacggccaccactgccacctgcagtatggagacagatgagggaaca gcccagcagagtgaagaagcttcagaatctgccaccagcacagagggcctgccgtccact gttgcgccccagagcagagccatcaccacagtcacacaggccacgcctctacccggacca gctgttccatctatttcttccatcacagagtcgtcctcagaggcaggagttgagtcggtt gttatggagagctcggaggcagagtccttgcagacagaaggccaggctgaagcagaggca gttgctatgcaggcagggttggaggcagaagcggaggcagtagctatgcctagtgacttc cagccggaggcagtggccttgccaagtgacttccagggagaagccatggcggaagcgatg gaggcagagagccaggcggaggcagaggcagtgcccatggagcatgacgcttctagcatg gcagggggagaaaccgctcaggagcagctaccaacagcagagatggagggtgtagatgca gcatcagcatcacaggccgaggcactggccttgccaccagagctgatgtcagacgtacag cccacaacgctgatggtgactggtctgaccccagaggagctggctgttacggcagccgca gaggcagcggcccaggctgcagcgacagaggaggcccaggcccttgccatccaggctgta ctacaagcagcacagcaggctgttatgagctcaggtgacggagatgctggagaagaccag cagacccacaccatacccatcgttctgacccagcaggaactggcggctttggttcagcag caacagcagcttcaggcagcccagcaactagccgctgcccaggccgcactgcccacagaa ggcctggctccagctgacagcctaaatgatccctcctcagaaagcaatggacacaacgag atggccgccgctgccacaagtgcagtagtcggactactgcctcgcaccacagcagagacc ttggctccatccagcacattagcacctgttgtagtttccagtccagctaagatgcaggca gctgcagctctcactgaagtggccaatggcattcaggctgggagacaaaatcctcccact gttacagtcaagcctcaagtgaagaaagaaaaccagtggtttgatgttgccattgttaaa gtgaccaatatggttgtaacacatttctacatgcctgcagatgactccacttatgttgag gatgattcaggcacaatccctgactacagccagatgaagaaggtggagcttcagcccggg accgcctacaagttccgtgtggcgggtataaacacttgtggccgtggagccttttctgaa atatcggctttcaagacttgtttaccagggttcccgggggcaccatgtgccataaagatc agcaagagtccagacggtgcccaccttacatgggagcctccatcgatgacatcagggaag atcacagaatactcagtgtatttggccatccagagcagccagaccaccgaggcgaaaccc tcggccccggcccagcttgccttcatgcgtgtgtactgcgggccaaacccctcctgcctg gttcagtcctccagcctgtccaacgcccacatagactataccaccaaacctgctatcatc ttccgcatcgccgctcgcaacgagaaaggttacgggcctgctacgcaagtgcgatggctg caagagtctaacaaagatggcctttctgcaaagcctgccccaaaaagagcagtttcttca ccagatgcgaaagggattggtcagaagaaagcaagaatggaccaataa

DBGET integrated database retrieval system