Pimephales promelas (fathead minnow): 120480680
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Entry
120480680 CDS
T08155
Symbol
trpc4apa
Name
(RefSeq) transient receptor potential cation channel, subfamily C, member 4 associated protein a
KO
K11796
Trpc4-associated protein
Organism
pprm
Pimephales promelas (fathead minnow)
Brite
KEGG Orthology (KO) [BR:
pprm00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
pprm01009
]
120480680 (trpc4apa)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pprm04121
]
120480680 (trpc4apa)
Protein phosphatases and associated proteins [BR:
pprm01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
120480680 (trpc4apa)
Ubiquitin system [BR:
pprm04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
120480680 (trpc4apa)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DUF3689
Motif
Other DBs
NCBI-GeneID:
120480680
NCBI-ProteinID:
XP_039529937
LinkDB
All DBs
Position
Unknown
AA seq
774 aa
AA seq
DB search
MATLLGPESPWMGGKKRTRNRNILTRIRQSQITGRGVSRGTQLPEVLLQERDKRAKWHGI
PVLLQELYESSHLNSDFTRSHIVLKELSSLLSMEAMSFVTEDRKTAQESTFPNTYTFDLF
GGVDLLVELLMRPTLTTLQKPKMNDDLVKDCLSVLYNCCICTEGVTKNLASRDDFVLFLF
TLMTNKKTFLQTATLIEDILGVKKEMIQLEWILNLSGLVQSFDQQQLANFCRILSVTISE
PDVGNDDKHTLLAKNAQQKRITSPSRAEVNQVTLLNIPGFIERLCKLATRKVSEATGTSN
FLQELEEWYTWLDNTLVLDALMQIATDEAEHSSTESSDESTLATIPLRHRLPQSMKIVHE
IMYKVEVLYVLCVLLMGRQRNQVHKMLAEFRLIPGLNNLFDKLIWRKFTTSNHVVHGQNE
NCDCSPEISFKIQFLRLLQSFSDHHENKYLLLNAQELNELSAISLKANIPEVEALVNTDR
SLVCDGKKGLLTRLLTVMKREPPDSSFRFWQARAVESFLRGATSYADQMFLLKRGLLEHI
LFCIIDSGCKSRDVLQSYFDLLGELMKFNIDAFKRFNKYVNTEEKFQVFLTQINSSLVDS
NMLVRCIVLSLDRFESQTEDVKVVEVLSECCLLSYMARVENRLSFLFRLVNIINVQTLTQ
ENVSCLNTSLVILMLARRRGKLPFYLNSLREKEYTEKYPGCLLNNFHNLLRFWQHHYLNK
DKDSTCLENSSCIPFSYWKETVSVLLGEDRTSPCAIISYIDEPYMELERDLLED
NT seq
2325 nt
NT seq
+upstream
nt +downstream
nt
atggcgacgctactggggcccgagtccccttggatgggaggaaagaaacggactcgaaac
aggaatattctcaccaggatacgacagagtcagatcactggacgaggcgtcagcagaggg
acgcagctcccagaagttcttcttcaggagagagataagagggcgaaatggcacgggatt
ccagtcttactccaggagctgtacgagagcagccacctaaacagtgactttacccgctca
catattgtcctgaaggaactgtcatccttgctgtctatggaagccatgtcttttgtgacc
gaggataggaagactgcgcaggaatccacctttcccaacacatacacctttgacctcttt
ggaggtgtagatctgctggtggaacttctgatgagacccactctgacaacgctacaaaag
ccaaagatgaatgatgacttggttaaggactgccttagtgtgctctacaactgctgcata
tgtacggaaggggtcacaaaaaacctggcatcgagggatgatttcgttttatttctcttc
acgttgatgacaaataagaagacctttttgcaaacagctacattaattgaagatattctt
ggagttaaaaaggaaatgattcagttggagtggatcctgaacctgtcgggactggtccag
agctttgaccagcagcagcttgccaacttctgtcgtatcctctctgtcaccatatctgag
cctgatgtggggaacgatgacaaacacacactcctggctaaaaacgcacagcagaaacgc
attaccagcccctcacgtgccgaggtcaaccaggtcacactcctgaatatccctgggttc
attgagcgtctctgtaagttggccacacggaaggtgtccgaggcaactggaacatcaaac
tttctgcaggaactggaggagtggtacacttggctcgacaacacgctagtactggatgcg
cttatgcagatagcaactgatgaagctgagcacagcagcacagaatcatctgatgagagc
acgttggccaccatcccactgaggcatcgtttgccacagtccatgaagatcgttcatgag
atcatgtataaggtggaagtgctgtacgtgttgtgcgtcctgctcatgggccgacagcgg
aaccaggtgcataaaatgttggcggagtttcgtttgattcctggactcaataaccttttc
gacaagctcatctggaggaaattcaccacctctaatcacgtggttcatggacagaatgaa
aactgtgattgcagtccggagatttcatttaaaatccagtttttgaggcttctgcagagc
tttagtgaccaccatgaaaataagtacttgcttctgaatgctcaagagctgaatgagttg
agtgccatctccctaaaggcaaacatccctgaggtggaggcactagtaaacactgacagg
agtttagtgtgtgatggtaaaaaaggtctcctcacacggctcctcacggttatgaaaaga
gaaccgccagactcttccttcaggttctggcaggcaagagctgttgagagcttcctcaga
ggggccacatcatacgcagaccagatgtttttgctgaagagaggcttactggagcacatc
ctgttttgcatcatcgacagtggctgcaagtccagagatgtcctgcagagctactttgac
ctgctcggagagcttatgaagttcaatattgatgccttcaagagattcaacaaatacgtc
aacacagaggaaaagttccaggtgttcctcacccagatcaacagctctctggtggactcc
aacatgcttgttcgctgtattgtcctctctcttgatcgatttgagagccagacagaggat
gtgaaagtggttgaagtgctctctgagtgctgtctgctgtcctacatggctcgagtggag
aacaggctgtccttcctttttaggctggttaacatcatcaatgtgcagaccctcacacag
gagaatgtgagttgtcttaacaccagcctggtgattctgatgctggcccggaggagaggc
aagctcccgttttacctgaactccctgcgggagaaggaatacacagagaaatatccaggc
tgcctcctcaacaacttccacaacttgctgcgcttttggcagcaccactacctcaacaag
gataaagacagcacctgcctggagaatagttcctgtattccctttagttattggaaggag
acggtttcagtactgctcggagaggacaggacttctccctgtgccattatcagctacata
gatgagccttacatggagctagagcgggaccttctagaggattga
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