KEGG   Pimephales promelas (fathead minnow): 120480717
Entry
120480717         CDS       T08155                                 
Symbol
snai1a
Name
(RefSeq) snail family zinc finger 1a
  KO
K05707  snail 1
Organism
pprm  Pimephales promelas (fathead minnow)
Pathway
pprm04520  Adherens junction
Brite
KEGG Orthology (KO) [BR:pprm00001]
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04520 Adherens junction
    120480717 (snai1a)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:pprm03000]
    120480717 (snai1a)
Transcription factors [BR:pprm03000]
 Eukaryotic type
  Zinc finger
   Cys2His2 Snail
    120480717 (snai1a)
SSDB
Motif
Pfam: zf-C2H2 zf-C2H2_4 zf-H2C2_2 zf-C2H2_jaz zf-met C2CH-3rd_BIRD-IDD zf-C2H2_6 zf-C2HE zf-Di19 zf-C2HC_2 zf-C2H2_7th_ZNF462 Zf-C2H2_ZNF451_1st Teflon_C zf-C2H2_DHX34 Zn_ribbon_8 Zf-C2H2_ZNF451_6th zf-C2H2_15 DUF7410 MTNAP1_ZnF Zn_ribbon_Elf1 Cpxcr1_C Zn_ribbon_IS1595 Ogr_Delta
Other DBs
NCBI-GeneID: 120480717
NCBI-ProteinID: XP_039530007
LinkDB
Position
Unknown
AA seq 254 aa
MPRSFLVKKYFTSKRPNYSELECQNDTLPDRYPLAELPAVSNDFPVTCLTTGLVWDVSLL
PSLHNPTSPSTSQGPLDLSSPSSSVSCSSSGEEDEGRTSDPPSPDSSDTYHPQQTSRPRR
NNKNRAGQREDKSEATVPVTRPAFFCKHCPKEYNSLGALKMHIRSHTLPCVCPTCGKAFS
RPWLLRGHIRTHTGERPFSCPHCNRAFADRSNLRAHLQTHADVKKYQCNTCSRTFSRMSL
LQKHSAAGCCPSTA
NT seq 765 nt   +upstreamnt  +downstreamnt
atgcctcggtctttcctggtaaaaaagtatttcaccagcaagaggccaaactacagcgag
ctggaatgtcagaacgatactctgccagacagatacccacttgcagaacttccagcagtc
agcaatgacttcccagtgacttgcttgaccactggactggtttgggatgtcagcttgcta
ccttccctgcacaatcccacatccccatccactagccagggcccgctggacctcagctcc
ccgtccagcagcgtcagctgcagcagcagcggagaagaggatgaaggacgcacatcagac
ccaccgagcccagattcctcagacacctaccacccccaacagaccagcaggccgagacgc
aacaacaagaacagggccggacagagagaggacaagagcgaggccaccgtcccagtcact
cgaccggccttcttctgcaagcactgccccaaagaatacaacagtctcggtgccctaaag
atgcacatccgctcacacaccctaccatgtgtctgtcccacctgtggaaaggctttctcc
cgaccctggctgttaagaggacacattcgcacgcatacaggtgagcgtccattctcctgc
ccacactgtaaccgtgccttcgcagaccgttctaacctgcgtgcgcacctgcagacccac
gcggatgtgaagaaataccagtgcaacacctgttctcgcaccttcagccgcatgtccttg
ctgcagaaacacagcgccgccggctgctgtccctccacggcctga

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