Pimephales promelas (fathead minnow): 120480718
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Entry
120480718 CDS
T08155
Symbol
si:dkey-13a21.4
Name
(RefSeq) ras-related protein Rab-7a
KO
K07897
Ras-related protein Rab-7A
Organism
pprm
Pimephales promelas (fathead minnow)
Pathway
pprm04137
Mitophagy - animal
pprm04140
Autophagy - animal
pprm04144
Endocytosis
pprm04145
Phagosome
pprm04148
Efferocytosis
pprm05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
pprm00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
120480718 (si:dkey-13a21.4)
04145 Phagosome
120480718 (si:dkey-13a21.4)
04140 Autophagy - animal
120480718 (si:dkey-13a21.4)
04137 Mitophagy - animal
120480718 (si:dkey-13a21.4)
04148 Efferocytosis
120480718 (si:dkey-13a21.4)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
120480718 (si:dkey-13a21.4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pprm04131
]
120480718 (si:dkey-13a21.4)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pprm04147
]
120480718 (si:dkey-13a21.4)
04031 GTP-binding proteins [BR:
pprm04031
]
120480718 (si:dkey-13a21.4)
Membrane trafficking [BR:
pprm04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Rab GTPases
120480718 (si:dkey-13a21.4)
Exosome [BR:
pprm04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
120480718 (si:dkey-13a21.4)
Exosomal proteins of other body fluids (saliva and urine)
120480718 (si:dkey-13a21.4)
Exosomal proteins of colorectal cancer cells
120480718 (si:dkey-13a21.4)
Exosomal proteins of bladder cancer cells
120480718 (si:dkey-13a21.4)
GTP-binding proteins [BR:
pprm04031
]
Small (monomeric) G-proteins
Rab Family
Rab7/9 [OT]
120480718 (si:dkey-13a21.4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ras
Roc
Arf
RsgA_GTPase
MMR_HSR1
Gtr1_RagA
GTP_EFTU
ATP_bind_1
AAA_5
AAA_24
AAA_16
AAA_7
AAA_29
Motif
Other DBs
NCBI-GeneID:
120480718
NCBI-ProteinID:
XP_039530008
LinkDB
All DBs
Position
Unknown
AA seq
204 aa
AA seq
DB search
MTEWSTPHLKVILIGNSGVGKSSFMTRFVDHRFTKLYRATIGVDFLAKEVTIDKRSVILQ
IWDTAGTERFHSLGTALYRGAHCCLLVFDVTSSVSFDALDVWKKEFMVQACPSDATAFPF
IVLGNKIDLDHREVSPNKAQQWCSEIGAEYFECSAKEDVGVDTTFHSAARAALQYFKSHH
VENGEDIQIIQKQQDKKPNKKCYC
NT seq
615 nt
NT seq
+upstream
nt +downstream
nt
atgactgagtggagcacaccacacttgaaagtgattcttatcggaaactctggagtggga
aaatcttcatttatgacccggtttgttgaccatcgctttactaaattgtatcgtgccaca
attggggtagatttccttgctaaagaagtcactattgataaaagatcagtgattcttcag
atctgggacactgcaggtacagagaggtttcattccctgggtaccgcactatatcgtgga
gctcactgctgcctcctagtgtttgatgttacctcgtccgtctccttcgatgcattagac
gtctggaagaaagagttcatggtgcaggcatgtccttctgacgccactgccttccctttc
atagtgctcggcaataaaattgatttggatcatcgtgaggtgtctccaaacaaagcccag
caatggtgcagtgaaatcggagctgaatattttgaatgtagtgccaaggaagacgttggc
gtggacacgacctttcacagtgcagcacgagctgccctgcagtattttaaaagccaccat
gtggagaatggagaagacatccagattatacagaaacaacaggataagaagccaaataaa
aaatgctattgttga
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integrated database retrieval system