KEGG   Pimephales promelas (fathead minnow): 120480718
Entry
120480718         CDS       T08155                                 
Symbol
si:dkey-13a21.4
Name
(RefSeq) ras-related protein Rab-7a
  KO
K07897  Ras-related protein Rab-7A
Organism
pprm  Pimephales promelas (fathead minnow)
Pathway
pprm04137  Mitophagy - animal
pprm04140  Autophagy - animal
pprm04144  Endocytosis
pprm04145  Phagosome
pprm04148  Efferocytosis
pprm05132  Salmonella infection
Brite
KEGG Orthology (KO) [BR:pprm00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    120480718 (si:dkey-13a21.4)
   04145 Phagosome
    120480718 (si:dkey-13a21.4)
   04140 Autophagy - animal
    120480718 (si:dkey-13a21.4)
   04137 Mitophagy - animal
    120480718 (si:dkey-13a21.4)
   04148 Efferocytosis
    120480718 (si:dkey-13a21.4)
 09160 Human Diseases
  09171 Infectious disease: bacterial
   05132 Salmonella infection
    120480718 (si:dkey-13a21.4)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:pprm04131]
    120480718 (si:dkey-13a21.4)
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:pprm04147]
    120480718 (si:dkey-13a21.4)
   04031 GTP-binding proteins [BR:pprm04031]
    120480718 (si:dkey-13a21.4)
Membrane trafficking [BR:pprm04131]
 Endosome - Lysosome transport
  Rab GTPases and associated proteins
   Rab GTPases
    120480718 (si:dkey-13a21.4)
Exosome [BR:pprm04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   120480718 (si:dkey-13a21.4)
  Exosomal proteins of other body fluids (saliva and urine)
   120480718 (si:dkey-13a21.4)
  Exosomal proteins of colorectal cancer cells
   120480718 (si:dkey-13a21.4)
  Exosomal proteins of bladder cancer cells
   120480718 (si:dkey-13a21.4)
GTP-binding proteins [BR:pprm04031]
 Small (monomeric) G-proteins
  Rab Family
   Rab7/9 [OT]
    120480718 (si:dkey-13a21.4)
SSDB
Motif
Pfam: Ras Roc Arf RsgA_GTPase MMR_HSR1 Gtr1_RagA GTP_EFTU ATP_bind_1 AAA_5 AAA_24 AAA_16 AAA_7 AAA_29
Other DBs
NCBI-GeneID: 120480718
NCBI-ProteinID: XP_039530008
LinkDB
Position
Unknown
AA seq 204 aa
MTEWSTPHLKVILIGNSGVGKSSFMTRFVDHRFTKLYRATIGVDFLAKEVTIDKRSVILQ
IWDTAGTERFHSLGTALYRGAHCCLLVFDVTSSVSFDALDVWKKEFMVQACPSDATAFPF
IVLGNKIDLDHREVSPNKAQQWCSEIGAEYFECSAKEDVGVDTTFHSAARAALQYFKSHH
VENGEDIQIIQKQQDKKPNKKCYC
NT seq 615 nt   +upstreamnt  +downstreamnt
atgactgagtggagcacaccacacttgaaagtgattcttatcggaaactctggagtggga
aaatcttcatttatgacccggtttgttgaccatcgctttactaaattgtatcgtgccaca
attggggtagatttccttgctaaagaagtcactattgataaaagatcagtgattcttcag
atctgggacactgcaggtacagagaggtttcattccctgggtaccgcactatatcgtgga
gctcactgctgcctcctagtgtttgatgttacctcgtccgtctccttcgatgcattagac
gtctggaagaaagagttcatggtgcaggcatgtccttctgacgccactgccttccctttc
atagtgctcggcaataaaattgatttggatcatcgtgaggtgtctccaaacaaagcccag
caatggtgcagtgaaatcggagctgaatattttgaatgtagtgccaaggaagacgttggc
gtggacacgacctttcacagtgcagcacgagctgccctgcagtattttaaaagccaccat
gtggagaatggagaagacatccagattatacagaaacaacaggataagaagccaaataaa
aaatgctattgttga

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