Pimephales promelas (fathead minnow): 120480811
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Entry
120480811 CDS
T08155
Symbol
cstf1
Name
(RefSeq) cleavage stimulation factor subunit 1
KO
K14406
cleavage stimulation factor subunit 1
Organism
pprm
Pimephales promelas (fathead minnow)
Pathway
pprm03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
pprm00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
120480811 (cstf1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pprm03019
]
120480811 (cstf1)
Messenger RNA biogenesis [BR:
pprm03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage stimulation factor (CSTF) complex
120480811 (cstf1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
CSTF1_dimer
ANAPC4_WD40
NBCH_WD40
Frtz
Motif
Other DBs
NCBI-GeneID:
120480811
NCBI-ProteinID:
XP_039530153
LinkDB
All DBs
Position
Unknown
AA seq
431 aa
AA seq
DB search
MFRPKPTLKDRHHLYRLIISQLLYDGYTSIANSLISEVKPQNVVSPSEQLMQLAKTGMEN
DDSAVQYAIGRSDNVAPGVGIDLEFDADVQTMSPEASEYETCYVTSHKGPCRVATYSRDG
QLIATGSADASIKILDTERMLAKSAMPLEVMMNETAQQNMENHPVIRTLYDHVDEVTCLA
FHPTEQILASGSRDYTLKLFDYSKPSAKRAFKHVQEAEMLRSISFHPSGDFLLVGTQHPT
LRLYDVNTFQCFVSCNPLDQHTDTISGVCYNPSANSYVTCSKDGSIKLWDGVSNRCVTTF
EKAHDGAEVCSAVYSKNSKYVLSTGKDSVAKLWEISTGRTLVKYTGAGLSGRQTHRTQGV
FNHTEDYVLLPDERTISLCCWDSRTAERKNLLSLGHNNIVRCIVHSPTNPGFMTCSDDFR
ARFWYRRTTTD
NT seq
1296 nt
NT seq
+upstream
nt +downstream
nt
atgttccgaccaaagcccacattgaaggacagacatcacctgtacaggcttatcatcagc
cagctgctgtatgacggctacaccagcatcgctaacagcctcatcagtgaggtgaagccc
cagaatgtggtgtctccatcagagcagctcatgcagctggccaagacgggaatggagaac
gatgacagtgcggtgcaatatgccattggccgctcggacaacgtggcgcccggtgtgggc
attgacctggagtttgatgcagacgtgcagaccatgtccccagaagcatcggagtacgag
acctgctatgtgacatcccataagggtccgtgccgtgttgccacctacagccgtgatggc
caactcattgcaacgggctccgccgacgcttccattaagatcctggatactgagcgcatg
ctggccaaaagtgccatgcctctagaggtgatgatgaacgaaacggctcagcagaacatg
gagaaccaccctgtgatcagaacattgtacgatcacgtggacgaggtcacatgcctggct
tttcacccgaccgaacagatcctggcctccggctctcgggattacaccctcaaactcttc
gattattcgaagccatcagcaaaaagagccttcaagcatgtacaggaagctgaaatgttg
cgctccatctctttccacccatctggggatttcttgctggtgggcacgcagcacccaact
ctgcgcctttatgacgtcaacactttccaatgtttcgtatcctgcaaccctctagatcag
cacacagacaccatcagcggagtctgttacaatcccagtgccaacagctacgtcacctgt
agcaaagatggcagcatcaaactgtgggatggagtgtctaaccggtgtgtgactaccttt
gagaaagcccacgacggggctgaggtctgctcggccgtctactccaaaaactccaagtat
gttctatccactggaaaggattctgttgccaaactctgggaaatttccacaggccggact
ttggtcaagtacacaggtgcgggtctcagtgggcgacaaacgcaccgcactcagggcgtt
tttaaccacacagaggactatgtgctgctgccggacgagagaaccatcagcttgtgctgc
tgggattcacgcacagccgagaggaagaacctgctctccttgggccacaataacatcgtg
cgctgtatcgtccactcacccaccaaccccggcttcatgacctgcagcgacgacttcaga
gcccgattctggtatcgccgcaccaccactgactaa
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