Pimephales promelas (fathead minnow): 120480844
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Entry
120480844 CDS
T08155
Name
(RefSeq) E3 ubiquitin-protein ligase TRAIP
KO
K11985
TRAF-interacting protein [EC:
2.3.2.27
]
Organism
pprm
Pimephales promelas (fathead minnow)
Brite
KEGG Orthology (KO) [BR:
pprm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pprm04121
]
120480844
Enzymes [BR:
pprm01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
120480844
Ubiquitin system [BR:
pprm04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
120480844
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-RING_2
zf-C3HC4_2
zf-C3HC4
zf-rbx1
zf-C3HC4_3
THOC7
zf-ANAPC11
zf-RING_UBOX
zf-RING_11
zf-RING_5
zf-C3HC4_4
zf-RING_Vps41
Crescentin
FmiP_Thoc5
Sec3_CC
Gp58
Zn_ribbon_8
zf-RING-like
Filament
CC2-LZ
WEMBL
ATG16
HIP1_clath_bdg
FANCL_C
T3SSipB
zf_RING_Vps8
MscS_porin
CCDC113_CCDC96_CC
TMPIT
zf-RING_16
Prok-RING_4
DUF948
RING_XB3-XBAT31
FapA
DUF730
IFT57
KxDL
RINGv
EzrA
SLX1_C
GAS
GIT_CC
DUF1664
Motif
Other DBs
NCBI-GeneID:
120480844
NCBI-ProteinID:
XP_039530213
LinkDB
All DBs
Position
Unknown
AA seq
452 aa
AA seq
DB search
MPIRAYCTICSDFFDNSKDVAAIHCGHTFHYVCLLQWFQSAPSKTCPQCRKQVSTRHIIN
KLFFDIAPEDDGTPVDPESLQNELDRMKAVLSAKEKEWKDKQKSVDTLTDTIERQKKDLD
RVRKEIGDKEMLCSVLRKQMNFLESQKNDGLAAKEEAKRLRVKMKTYESLDVVLQGQRSE
VEAMITDMGVGQSAVEQLSIYCISLKKEYENLKESKKSTNEMCEKLKRELISSNSKLQKA
TKETNRIKEDMKALQNDLSNADKEITSLKKKVEILQRTLSTPTRTNEAISRLVFESPAPL
ELKPPGHGPMTDSQEIDLNLTFDINTPEQVEKKPVQVPSKKFRLDPSVPLSNNVENARGR
SNGRVKEDDVMGPMLRNSLLFRKNAFGSMLDPCKFGTVRSGYDGLGGRAKFIQPSPLSEI
RPLAMKAKRKKVSRPVTSKPTSSLTTLDGFLE
NT seq
1359 nt
NT seq
+upstream
nt +downstream
nt
atgcccattcgcgcatactgcaccatctgctcggatttttttgataattccaaagatgtg
gctgcaattcactgtggtcacacttttcactatgtctgtcttctccagtggtttcagtcg
gccccaagcaaaacctgtccacaatgtaggaaacaggtcagcacacgacacattatcaac
aagctcttctttgacattgccccagaggatgatgggacgccggtggaccccgaaagttta
cagaatgagcttgatcgcatgaaagcagtattgtctgcaaaagagaaagaatggaaggac
aagcaaaagtcagtggacactctaacagacacaattgagaggcagaagaaggacctggat
agagtccggaaggaaatcggagacaaagagatgttgtgttctgtcctccggaaacagatg
aatttcttggagagtcagaaaaatgatggactggcagccaaggaggaagccaagcgactc
agagtcaaaatgaaaacctatgagagtttagacgtggtcctacaaggtcaaaggtctgaa
gtggaggctatgatcactgatatgggtgttggtcagtctgcagttgaacaactctccata
tactgcatctcacttaaaaaggagtacgaaaacctgaaagaaagcaagaaatcaacaaat
gaaatgtgtgagaagctaaaaagggaactgatctcttccaacagcaagttgcagaaagcc
actaaagagaccaacaggataaaggaggacatgaaggcacttcagaatgacctgtccaac
gcagacaaagagatcacaagcctgaaaaagaaagtggaaattcttcagcggacgttaagc
actccaactcgcactaatgaggccatcagcagactggtgtttgaaagccctgctcctctg
gagctgaagcctcctggtcatggtccgatgacagactctcaggaaattgacctgaatttg
acctttgacatcaacacacctgaacaggtggagaagaaacctgttcaggtcccgtctaag
aagtttcgtctggacccttcggtacccttatccaacaacgtggaaaatgcccgcggacgt
agtaatggtcgtgttaaagaagatgatgtcatggggcccatgttaaggaactcgctgctc
ttcagaaagaacgcgtttgggagcatgctggacccgtgcaaatttggcactgtaagatcc
ggctatgatggacttggaggaagagccaaatttatccaaccttctcctctatctgagatt
cgacccctcgccatgaaggccaagaggaagaaggtttccaggcccgttacaagcaagccc
acctccagcctgaccactctggatggtttcttggaataa
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