Pimephales promelas (fathead minnow): 120480893
Help
Entry
120480893 CDS
T08155
Symbol
sox9a
Name
(RefSeq) transcription factor SOX-9a
KO
K18435
transcription factor SOX9 (SOX group E)
Organism
pprm
Pimephales promelas (fathead minnow)
Brite
KEGG Orthology (KO) [BR:
pprm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pprm03000
]
120480893 (sox9a)
Transcription factors [BR:
pprm03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
120480893 (sox9a)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HMG_box
Sox_N
HMG_box_2
HMG_WDHD1
Gam
Motif
Other DBs
NCBI-GeneID:
120480893
NCBI-ProteinID:
XP_039530265
LinkDB
All DBs
Position
Unknown
AA seq
458 aa
AA seq
DB search
MNLLDPYLKMTDEQEKCLSDAPSPSMSEDSAGSPCPSASGSDTENTRPAENSLMAPDGTL
GDFKKDEDDKFPVCIREAVSQVLKGYDWTLVPMPVRVNGSSKNKPHVKRPMNAFMVWAQA
ARRKLADQYPHLHNAELSKTLGKLWRLLNEGEKRPFVEEAERLRVQHKKDHPDYKYQPRR
RKSVKNGQSESEDGSEPTHISPNAIFKALQQADSPASSMGEVHSPSEHSGQSQGPPTPPT
TPKTDAQPGKADLKRETRPLQESTGRPLNIDFRDVDIGELSSDVIETFDVNEFDQYLPPN
GHAYAGGYGTWMGKNAGAQSGALGTGEPDQPRTTHIKTEQLSPSHYNEQQQQQGSPQHVS
YGSFNVQHLQHYSTSFPSITRAQYDYSDHQGGATSYYSHAGGQSSGLYSTFSYMSSSQRP
MYTPIADSTGVPNIPQSNHSPPQHWDQQQPVYTQLSRP
NT seq
1377 nt
NT seq
+upstream
nt +downstream
nt
atgaatctcctagacccctacctgaaaatgacagatgagcaagagaagtgtttgtctgac
gcccccagtccgagcatgtccgaggactccgcgggctccccgtgcccgtccgcctcgggg
tccgacacggagaacacgcgccccgcggagaacagcctcatggctccggacgggacgctc
ggagacttcaagaaggacgaagacgacaagttcccggtgtgcatccgagaggcggtgtct
caggtgctgaagggctacgactggacgctcgtgcccatgccggtgagagtgaacggctcg
agcaaaaacaagccgcacgtgaagagaccgatgaacgcgtttatggtgtgggcgcaggcg
gcgcgcaggaagctcgcggatcaatacccgcacctccacaacgccgagctcagcaaaact
ctgggaaaactttggagattactgaacgagggtgaaaagcgtcccttcgtggaagaggct
gagcgcctcagggttcagcacaagaaagatcaccccgactacaagtaccagcctcggcgg
aggaagtctgtgaagaacgggcagagcgagtccgaggacggcagcgagccgacgcacatc
tcgcccaacgcgatctttaaagcgctccagcaagcagactcgcccgcgtccagcatggga
gaagtgcactcgcccagcgaacactcaggccagtcccaagggccgcccactcctcccacc
accccgaaaaccgacgcccagccaggcaaagcggatctgaagcgggaaacccgtccgctc
caggaaagcacgggacgcccgctcaacatcgacttccgcgacgtggacatcggcgagctc
agcagcgacgtcatcgaaacgttcgacgtcaacgagttcgaccagtacctgccgccgaac
gggcacgcctacgcgggcggctacgggacctggatggggaagaacgccggcgctcaaagc
ggcgcgctcggcaccggagagccggaccagccgaggacgacgcacatcaagaccgaacag
ctcagtcccagccactacaacgaacagcagcagcagcagggttcgccgcaacacgtcagc
tacggctccttcaacgtccagcatctgcaacactacagcacttcgttcccgtcaatcacc
cgcgcgcagtacgactactccgaccaccagggcggcgccacctcctactacagccacgcc
ggcgggcagagctccggcttgtactccaccttcagctacatgagctccagccagaggccc
atgtacacacccatcgctgactcgacaggggttcccaacatcccccagtccaaccacagt
cctcctcagcactgggaccagcagcagccggtctacacgcagctgtcgagaccctga
DBGET
integrated database retrieval system