Pimephales promelas (fathead minnow): 120481012
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Entry
120481012 CDS
T08155
Symbol
rprd1b
Name
(RefSeq) regulation of nuclear pre-mRNA domain-containing protein 1B isoform X1
KO
K15559
regulator of Ty1 transposition protein 103
Organism
pprm
Pimephales promelas (fathead minnow)
Brite
KEGG Orthology (KO) [BR:
pprm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pprm03021
]
120481012 (rprd1b)
Transcription machinery [BR:
pprm03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
120481012 (rprd1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CREPT
CID
CTK3
Motif
Other DBs
NCBI-GeneID:
120481012
NCBI-ProteinID:
XP_039530360
LinkDB
All DBs
Position
Unknown
AA seq
379 aa
AA seq
DB search
MMSRVNDVTRARRSFVYQPNLQQNPIVFKHSPKVSRNIYRGLSGERAISMSSFSESALEK
KLSELSNSQQSVQTLSLWIIHHRKHSSLIVRVWHRELKKAKRNRKLTFLYLANDVIQNSK
KKGPEFTKDFEGVLVDACSHVARDGDDGGKKHMERLLNIWQERSLYRPDFIQQLKLAIED
SDSPKHKPTDDRKNLKRSYQKVQEEEEEEDDDYRVQYSPHETDAAAPQLTEDLVKALQDL
ENAASGDAAVRQKIASLPQEVQDVSLLEKITDKQAADKLSKTVDEACLLLAEYNGRLAAE
LEDRRQLARMLTEYIQSQKEALNEREKKLEEYKQKLARVTQVRKELKSHIQSLPDLSLLP
NVTGGLAPLPSAGDLFSTD
NT seq
1140 nt
NT seq
+upstream
nt +downstream
nt
atgatgtcgcgtgtcaatgacgtcacccgcgcgcgacgctcgtttgtttatcaacccaac
ttgcaacaaaatcccatcgtgttcaaacattctccaaaagtttcgaggaatatatacaga
gggttgtctggagagagagcgatcagcatgtcgtcgttctccgagtccgcgctggagaag
aagctgtctgaactgagtaactcgcagcagagcgttcagacgctgtctctgtggatcatt
catcaccgcaaacattcatcgctcatcgtgcgtgtgtggcacagagagctgaagaaagct
aaaagaaacaggaagttgacgttcctgtatctggctaatgacgtgatccagaacagtaag
aaaaagggtcctgagttcaccaaagacttcgaaggcgtcctggtggatgcctgctcacac
gtggccagagatggagatgacggtgggaagaagcacatggagaggttgctgaacatctgg
caggagcgcagcctctaccgtccagacttcatccagcagctcaaactggctatcgaggac
tcggacagtcccaaacacaagcccacagatgatagaaaaaacttgaagagaagctaccag
aaggtgcaggaggaagaggaggaggaagatgatgattacagagttcagtactctcctcat
gagacggacgctgccgctccacagctgacggaggatctggtgaaagcgctgcaggatctg
gagaacgcggcgtctggtgacgcggccgtgagacagaagatcgcatcacttccacaggaa
gtgcaggacgtttcccttctagagaagatcacagataaacaggcggccgataagctgtcg
aagacggtggacgaggcttgtcttctgctggccgagtataacggacggctggccgcggag
ttggaggaccgcagacagctggcccgtatgctcacagaatacatccagagccagaaggag
gcgctcaacgagagggagaagaagctggaggaatacaagcagaaactggctcgtgtcaca
caagtgcggaaggagctgaagtcgcacatccagagtctcccggatctgtctctgctcccg
aacgtcaccggcggtctcgcacccctgccgtctgccggagatctcttttccaccgactga
DBGET
integrated database retrieval system
