Pimephales promelas (fathead minnow): 120481039
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Entry
120481039 CDS
T08155
Symbol
prdm1a
Name
(RefSeq) PR domain zinc finger protein 1a
KO
K24501
PR domain zinc finger protein 1 [EC:2.1.1.-]
Organism
pprm
Pimephales promelas (fathead minnow)
Brite
KEGG Orthology (KO) [BR:
pprm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pprm03000
]
120481039 (prdm1a)
Transcription factors [BR:
pprm03000
]
Eukaryotic type
Zinc finger
Cys2His2 PRDM
120481039 (prdm1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PRDM2_PR
zf-H2C2_2
zf-C2H2
zf-C2H2_4
SET
C2CH-3rd_BIRD-IDD
zf-C2H2_jaz
zf-C2H2_6
Zf-C2H2_ZNF451_C
zf-met
DUF6761
zf-C2H2_15
zf-C2HE
STL11_N
Phage_zn_bind_3
Motif
Other DBs
NCBI-GeneID:
120481039
NCBI-ProteinID:
XP_039530396
LinkDB
All DBs
Position
Unknown
AA seq
771 aa
AA seq
DB search
MCGWDQGVLAASHHSSAMLTTEGAPYTADNEELKMDVEDADMTKWTEEEFEEKCTYVVKD
HTWEGPAEGTRAEASLPRNLAFKHPPHATEIIGVVSREYIPKGTRFGPLVGESYTAENVP
KDANRKYFWRIYSNGEFRHFVDGLDEEKSNWMRYVNPAHSQQEQNLAACQNGMSIYFYTV
KAIPADQELLVWYCPEFARRLNYPASGEIMMQKLKQSLIEAKQQATEVKHPVKREHSVSE
ILKDVLQEPSRPLPTRPRCPNTPDRPLYPSPVYPPRPSLNEDILKSTTVFGHPTRSHRQF
SATPSPSAHSSPERSPESSPAPASLEPRDTLLSFSPALFSRGLNHYHGYSPAGSMPFYPN
PHYSRYLMPHYPVSSLSGPPTLGGMFPHMYPFYSSLIPPHVPFPPGMLPSEGGRQFLLPP
DSPAHRDLLLPAATSAFSAATSLKDKPIIHGHGHHYAPAGGSPTAGSGASTGRVPTKPTS
AVLSTSRTEDEAINLSKMKRGSAGYKSLDYPLKKQNGKIKYECNVCTKTFGQLSNLKVHL
RVHSGERPFKCQTCNKGFTQLAHLQKHFLVHTGEKPHECQVCHKRFSSTSNLKTHLRLHS
GEKPYQCKICPAKFTQFVHLKLHKRLHTRERPHQCPHCHRNYIHLNSLRLHLKGYCLALI
PPPSCSLDELNRVNEEIERFDISDNADRLEEMEGFDVDGMVEKQIFGLLWQEMDFKASYH
TVSTSGDRHPSTPYRLSEHGSEASVIKVHCSSPIQLLPITVKKETEEAMET
NT seq
2316 nt
NT seq
+upstream
nt +downstream
nt
atgtgtggctgggaccaaggcgtcctggctgcttctcatcacagctcagcaatgttgact
actgagggagcgccctacaccgccgacaatgaggagctcaagatggacgtggaggatgca
gacatgacaaagtggacggaggaagagtttgaggagaaatgcacgtacgtggtgaaggac
cacacctgggagggtccggcggagggcacacgggccgaggcgtcgctgcccaggaacctg
gccttcaaacacccgccgcacgccacagagatcattggcgtagtcagcagagaatacatc
cccaaaggcacacgcttcggcccccttgtgggagagagttacactgcagaaaatgtcccc
aaagatgccaacaggaagtacttctggcggatatactcaaatggagagttccgtcatttt
gtggacggactggacgaggagaagagtaactggatgcgttatgtgaacccagctcattcc
cagcaggagcagaaccttgccgcctgccaaaacgggatgagcatctatttctacaccgtc
aaggccattcctgcagaccaggagcttctggtgtggtactgccccgagtttgctcgccgc
cttaactaccctgcctctggagagattatgatgcaaaaactcaagcagagcctgattgaa
gccaagcagcaagcgaccgaagtcaagcacccggtgaaaagagagcacagcgtttcagag
atcttgaaagacgttctgcaagaacctagcagacctcttcccacccgtcctcgttgccca
aacaccccagaccgacctctctaccccagtcccgtctatccgccccgcccttccctaaac
gaggacattttaaagagcaccacagtgtttggccacccgacacgctcccacagacagttt
tcagcgacgcccagcccttccgcacacagcagtcccgagagaagtccagaaagcagtcct
gcaccagcatcccttgagccacgagacactcttctctccttctctccagcactgttcagt
cgaggcctgaaccactaccatggctactcaccggccggctcaatgccattctacccgaac
ccgcactactcgcgctacctcatgccccactaccctgttagtagtttgagtgggccacca
accctagggggtatgtttccacacatgtacccattttacagcagcctgatcccccctcac
gtacccttcccacccggaatgcttccatccgagggcggtcgacaattcctgcttccccct
gactctccggctcacagggatctccttctaccagcggccaccagtgccttttccgcagcc
acttctctgaaagacaaacccatcatccacgggcacgggcaccactacgcccctgccggc
gggtctccaacagccggttcgggagcctctacgggacgcgttcctaccaagcctacctca
gccgttctgagcaccagccgcacagaggacgaggccatcaatctcagcaagatgaaacga
ggctccgcaggctacaaaagtctcgattatccactcaagaagcagaacgggaagatcaag
tacgagtgcaatgtttgcaccaagactttcggtcaactttccaatctcaaggttcacctg
cgtgtccatagtggcgaacgaccctttaagtgtcagacctgtaataaaggtttcacccag
ctggctcatctgcagaaacactttctggtgcacaccggagagaaaccccatgagtgccag
gtgtgtcacaagcgtttcagcagcacgagcaacttgaagacacatttgcggttgcattct
ggggaaaagccctaccagtgcaagatctgcccagccaagtttacacagttcgtccacctc
aagctgcacaaacggctacacacacgagagcgaccacaccaatgcccgcactgccaccgc
aactacatccacctcaacagtctccggctccatctcaaaggctattgcctagcgctcatc
cctcctcccagctgcagcctcgacgaactcaaccgcgtcaacgaggagatcgaacgcttc
gacatcagcgataacgcagaccggctggaagagatggaggggtttgacgtggacggcatg
gtggagaaacagatcttcggtttgctctggcaagagatggattttaaggcgtcgtatcac
acggttagcactagcggagaccggcacccgtcgacaccgtatcgtctgagcgaacacgga
agtgaggcgtcggtcatcaaggttcattgcagcagccctattcaactcctacccatcacg
gttaaaaaggagacagaggaggccatggaaacctag
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