Pimephales promelas (fathead minnow): 120481139
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Entry
120481139 CDS
T08155
Symbol
rfwd3
Name
(RefSeq) E3 ubiquitin-protein ligase RFWD3
KO
K15691
E3 ubiquitin-protein ligase RFWD3 [EC:
2.3.2.27
]
Organism
pprm
Pimephales promelas (fathead minnow)
Brite
KEGG Orthology (KO) [BR:
pprm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pprm04121
]
120481139 (rfwd3)
Enzymes [BR:
pprm01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
120481139 (rfwd3)
Ubiquitin system [BR:
pprm04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
120481139 (rfwd3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40_RFWD3
WD40_CDC20-Fz
Beta-prop_THOC3
zf-RING_2
zf-C3HC4
Beta-prop_WDR5
WD40
zf-RING_UBOX
zf-C3HC4_2
EIF3I
Beta-prop_EML_2
Beta-prop_WDR3_1st
WDR55
zf-rbx1
WD40_WDHD1_1st
CFAP43_N
Beta-prop_RIG_2nd
Beta-prop_WDR75_1st
zf-UDP
zf-RING_Vps41
WD40_Prp19
zf-RING_11
WD40_2
Beta-prop_WDR36-Utp21_2nd
Beta-prop_EIPR1
Beta-prop_HPS5
zf-ANAPC11
Beta-prop_WDR36-Utp21_1st
Beta-prop_SPT8
zf-RING_4
Beta-prop_TEP1_C
Motif
Other DBs
NCBI-GeneID:
120481139
NCBI-ProteinID:
XP_039530531
LinkDB
All DBs
Position
Unknown
AA seq
726 aa
AA seq
DB search
MIGVEMQTHLCLTHLRCVRMEDMEVDAAAGVIVLSESDSTTEDESVSSLLDRLRRPVNRQ
VQRRRRRRTGLSTREELQALIRDTEELSERLRRHTADAHAHSSSRPAAVITHTSRQPAAS
GPRPALASHTGPSVPQEPGGTGAGEPRPESEAVPEPMGLAGEAVPEPVGLAGEAVLEPVG
PAGEPLPEPESPAGAVPCPVGEAVPEPGVPAGEVVPEPGGPAGAVPCPAGEAEDRDGEGE
ICSICFEPWTSAGDHRLAALRCGHLFGYICISRWLSGGGNKCPQCNKQAKRSHIIFLYAR
RLKALDNAEEVRLKSCLELEQGMRRMEQLEVAVCRQQQQLVADENARLRRELEELRRWKA
QVSLGSSQGSFLSSSQRQDASGAGHYVFSKALLVSQSGSSRVMSYCEPLGCLLASQPSTH
ATLLPGFGVKMISAATLKPSQYIPIHSKQIRGLAFSQQQDSLLLSASFDSTIKLTSLLTN
TVVQAYNTGRPVWSCCWCQDNNNYIYAGLSNGSVLVYDTRDTSTHVQELAPLRSSCPVVS
LSYVPRSASSSFPCGGLIAGSLEGGCFWEHVDGTAYTPHILPLESGNCTDIQVEPESRHC
LVTYRPGRTHPSLRCVLMELNRTPQTDGTQTPVCSCTAVQTFSAGASCKLLTKNRVFRSP
AGQGATLVCAGDEASNSTMVWDAGTGALLQKMPADLPVLDICPFQAQQSSFLASLTEKML
KVYKWE
NT seq
2181 nt
NT seq
+upstream
nt +downstream
nt
atgataggtgtggagatgcagacccacttgtgtcttacccacttgcggtgtgtgaggatg
gaggacatggaggtggatgcagcggccggtgtgatcgtgctctcggagtccgacagcacc
acagaagacgagagtgtgtcttcgctgttggatcggctccggcgtccggtgaatcggcag
gtccagaggaggaggaggcggaggactggactgagcactcgtgaagagctccaggcgctt
atacgggacacagaggagctgtcggagcgcctgagacgacacacagctgacgctcacgca
cactcctccagccggcccgctgccgtcatcacacacacgtcccgtcagcccgccgcctcg
ggcccacggccagccctcgcctcacacacaggacccagtgttcctcaggagcccggaggg
acgggagcaggagagccgagaccagagtctgaggctgtgccggagccgatgggtctcgca
ggagaggctgtgccggagccggtgggtctcgcaggagaggcagtgctggagccggtgggt
cccgcaggcgagcctttgccggagccagagagtcccgcaggagctgtcccctgtcccgta
ggcgaggctgtgccggagccaggggttcccgcaggagaggttgtgccagagccggggggt
cccgcaggagcggtgccgtgtcccgcaggagaggctgaggaccgggacggggagggcgag
atctgctccatctgcttcgagccctggacctcggccggggaccaccggctggccgctctg
cgctgcggacacctgttcggctacatctgcatctcacgctggctctcgggcggagggaac
aagtgtccacagtgtaacaagcaggcgaagcgcagccacatcatcttcctgtacgcgcgc
agactgaaggcgctggacaacgcggaggaggtgcgtctgaagagttgtctggagctggag
cagggcatgcgccgcatggagcagctggaggtcgctgtgtgccgtcagcagcagcagctc
gtggccgatgagaacgcacgtctgcgcagagagctcgaggagttgaggcggtggaaagcg
caggtgtcgctgggctcgtcccagggctcgttcctctcctcgtcccagaggcaggacgcg
tccggcgcggggcattacgtgttctccaaggctctgctggtgtctcagagcgggagcagt
cgcgtgatgtcctactgcgagcccctcgggtgtctgctggcgtcccagccctccacacac
gccacgctgctgcccggcttcggggtgaagatgatcagcgccgcgacgctcaagccgagt
cagtacatccccatccacagcaagcagatccgaggcctggccttcagccaacagcaggac
agcctgctcctgtccgcctccttcgacagcaccatcaagctcaccagcctgctgacgaac
accgtggtccaggcctataacacgggccggcccgtgtggagctgctgctggtgccaggac
aacaacaactacatctacgccgggctgagcaacggctctgtgctggtgtacgacacgcgg
gacacgagcacacacgtgcaggagctggcgccgctgcggtccagttgcccggtggtgtcg
ctgtcgtacgtgccccgctccgcctcgagctcgttcccctgcggagggctgatcgccggc
tcgctggagggcggctgcttctgggagcacgtggatggaaccgcatacacacctcacatc
ctgcctctggagtccgggaactgcaccgacatccaggtggagccggagagccgacactgc
ctcgtcacgtacaggccaggtcgtacacacccgtctctgcgctgtgtcctgatggagctg
aaccgaacgccccagaccgatggcactcagacgcccgtgtgctcctgcacggccgtgcag
accttcagcgctggcgcctcctgcaaactgctcaccaagaaccgtgtgttcaggagcccg
gcgggacagggcgccacgctcgtgtgcgccggagatgaggccagcaactccaccatggtg
tgggacgcgggcaccggggcgctgctgcagaagatgcctgcggatctccctgtgctggac
atctgcccgttccaggcccagcagagcagcttcctggcctcgctcaccgagaagatgctc
aaggtctacaagtgggagtga
DBGET
integrated database retrieval system
