Pimephales promelas (fathead minnow): 120481226
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Entry
120481226 CDS
T08155
Name
(RefSeq) DDB1- and CUL4-associated factor 1 isoform X1
KO
K11789
DDB1- and CUL4-associated factor 1 [EC:
2.7.11.1
]
Organism
pprm
Pimephales promelas (fathead minnow)
Brite
KEGG Orthology (KO) [BR:
pprm00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
pprm01001
]
120481226
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pprm04121
]
120481226
Enzymes [BR:
pprm01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.11 Protein-serine/threonine kinases
2.7.11.1 non-specific serine/threonine protein kinase
120481226
Protein kinases [BR:
pprm01001
]
Serine/threonine kinases: Other
Other
120481226
Ubiquitin system [BR:
pprm04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
120481226
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40_Prp19
WD40_CDC20-Fz
Beta-prop_EML_2
EIF3I
WD40
ANAPC4_WD40
Beta-prop_WDR19_1st
LisH
Beta-prop_WDR90_POC16_2nd
Motif
Other DBs
NCBI-GeneID:
120481226
NCBI-ProteinID:
XP_039530678
LinkDB
All DBs
Position
Unknown
AA seq
1515 aa
AA seq
DB search
MASGDGGGVDSKAELSALLEQWEREQQAGSGELLNILTKISDLVERETEAYHKADPDPFD
DRHPGRADPECMLGHLLKILFKNDDFMNALVNTYVMSSREVPLNTAACRLLLNIMPGLET
AVVFQEKDGIVERLFKWAQEADQPLRIYATGLLAGAMENQDIAANYREENSVLVPLMLQR
LRELQDKESESRRDGKRPSKSPAPLLPLDEETVDGEFVPSALPESPDAEPVCALRSLGRS
NAGVKGLMKPASAVPPEENEAPLEGLRSWRKRENGGKVKQKLNFSLPEPERSFSELSNSS
WSEMSPWVIGNNYHLFPLTPEIEQRLILQYLTPLGEYQELLAVFMQLGARELLMHYMDLK
QTNDVQLTFEALKYLASLLLHKKFAAEFVAHGGVPKLLEIPRPSMAATGVSLCLYYLAYN
QDAMERVCMLPHSLLAEVVSYTLWLLECSHASGCCHATMFFSICFSFRAVLDLFDKQDGL
RRLVNLISTLEILNPEDQGALLSDDEIFSSRQTAKHTCMALRRYFEAHLSIKVEQVKQSL
QRTEGGALIHPQPYYKACSYTHEQVVEMVEFLIEFGPARLYWEPAEVFHILSCVQLLLQL
ISIACDWRTYYGRADTVRYALDILSILTVIPKTQVLLSENVAVLDESGSSISTVGMSIVL
VVAEGEVFVNDAEIQKSALQVIINCVCAPDKRVSSIGKFISGTPRRRLPQSHRASESVLA
KMWNVVQSNNGIKVLLSLLTIKMPITDADQIRALACKALVGLARSAAVRQIISKLPLFSS
GQIQQLMKEPVLQDKRSEHVRFCKFAAELIERVSGKPLLIGTDVSLARLQRANVVAQSRI
SFPEKELLLLIRNHLLSKGLSDTATALTKEAELPMGLHALAHSSVPPFTPVSVATPPSPA
ASIPRTPRLTNGVAARLGGHTSHHLQPRPSTSQAPPPPSPVVSHHSNGSPLIGRIVFSRE
RPSPCPAAGGKRPKVLRQKSDHGAFIQSPAMKKQLDRHLPSPPSLDSIITEYLREQHARC
KNPVTTCPPFSLFTPHQCPEPKQRRQAPTNFTPRHTRRVVYPKYGGVDGGCFDRHLIFSR
FRPISVFREAEEDESGFMCCAFSARERFLMLGTCTGQLKLYNVFSGQEEASYSCHSSAIT
HLEPSRDGSLLLTSASWSYPLSALWGMKSVFIMKHSFLDDHYVEFSKLSQDRVIGTKEHI
AHIYDIQTGQKILTLNNPDLANNYKRNCATFNPTDDLVLNDGVMWDVRTSQAIHKFDKFN
MNISGVFHPNGLEVIINTEIWDLRTFHLLHTVPALDQCRIVFNNNGTVIYGAMLQADDED
DMMEQQMKSPFGSSFRTFDATDYKPIATIDVKRNIFDLCTDTKDCYLAVIENQDSINMDT
VCRLYEVGRQRLAEEEEDEEEQEEDDQDEDDDDDSDDDIDDIDTDPLLAELNENNGEEDG
EHDFSPSDDEEVARLLDEEADDDDDDDDDDDDDDDDDDDDDDSDDNERDVELVLDNTDSS
DNSDLEDDIILALNE
NT seq
4548 nt
NT seq
+upstream
nt +downstream
nt
atggcgtctggtgacggagggggtgtggactcgaaggcggagctcagtgctttactggag
cagtgggagagagagcagcaagcgggatccggcgaactcctcaacatactgaccaagatc
tcggatctggtggagcgggagacggaggcgtatcacaaggcggatccggacccgttcgat
gaccgccatccaggacgggcagatccagagtgcatgctgggacacctgttgaaaatcctg
ttcaagaacgatgatttcatgaatgcgctggtgaacacgtacgtgatgagcagtcgagag
gtgccgctgaacaccgcggcctgcagactcctgctgaacatcatgccgggcctcgagacc
gctgtggtcttccaggagaaggacggtattgtggagcgcttgtttaaatgggcccaggag
gcggatcagccgctccggatctacgccacaggcctgctagccggagccatggagaaccag
gacatcgccgccaactatcgcgaggagaactctgtgctggttcctctcatgctgcagaga
ctgagggagcttcaggacaaggagtcggagagccggagagacggcaagcgtccgagcaag
agtccggctcctctgctcccgctggacgaggagacggtggacggagagttcgttcccagc
gctctgccggagagcccggacgcggagcccgtgtgtgcgctgaggagcctgggccgctcc
aacgcgggcgtgaaaggcctgatgaagccggcgtctgcggtgccgccggaggagaacgag
gcgccgctggagggcttgaggagctggaggaagagggagaacggcgggaaggtgaagcag
aagctgaacttctccctgccggagccggagcgcagcttcagcgagctgtccaacagcagc
tggtccgagatgagcccctgggtcatcgggaataactatcacctgttcccgctcacgccc
gagatcgagcagcggctgatcctgcagtacctcaccccgctgggggaataccaggagctg
ttagctgtgttcatgcagctcggcgctcgagagctgctgatgcactacatggacctgaag
cagaccaatgacgtccagctcacattcgaagcgctgaagtatcttgcatctctgctcctg
cataagaagtttgctgccgagttcgttgcccacggaggagtgccgaagctgctggagatc
ccccggccctccatggccgccaccggcgtctctctgtgtctctattacctcgcgtacaac
caggacgccatggagcgggtgtgtatgctgccgcactcgctgctggcggaggtggtgagc
tacacgctgtggctgctggagtgctcccacgcctccggctgctgccacgccaccatgttc
ttctccatctgcttctccttcagagccgtgctcgacctcttcgacaagcaggacggcctg
cgccggctcgtcaacctgatcagcacgctggagatcctgaaccccgaggaccagggcgca
ctgctgagcgacgacgagatcttctccagccggcagacggccaaacacacctgcatggcc
ctgcgcaggtacttcgaggcgcacctgagcatcaaggtggagcaggtcaagcagtcgctg
cagaggaccgaggggggggcgctcatacacccacagccctattacaaggcgtgctcctac
acacatgagcaggtggtggagatggtggagttcctgatcgagttcgggccggcgcgcctg
tactgggagcccgccgaggtcttccacatcctgtcctgcgtccagctgctgcttcagctc
atctccatcgcctgcgactggaggacctactacggcagggctgacaccgtgcggtacgcg
ctggacatcctgagcatcctgacggtcatccccaagactcaggttctgctgtcggagaac
gtggcggtgctggacgagagcggctcctccatctccactgtcgggatgagcatcgtgctg
gtcgtcgccgagggtgaagtattcgtaaacgacgccgaaatccagaagtcggccctgcag
gtgatcataaactgcgtctgcgctccggacaagcgtgtctccagcatcggcaagttcatc
tcgggaacgccacgccgccgtctgccgcagagccaccgcgcgagcgagagcgtgctagcc
aagatgtggaacgtggttcagtccaacaacgggatcaaagtcctgctgtccctgctgacc
atcaagatgcccatcaccgatgctgaccagatccgcgcgttagcgtgcaaagccttggtt
ggattagcacgtagcgcagcagtacggcaaatcattagcaagcttccgctattcagcagc
ggtcagatccagcagctcatgaaggagccggtgcttcaggacaagcgtagcgaacacgtg
cgcttctgcaagtttgcagcagagctaatcgagcgagtgtccgggaagcctttgttgatc
ggcactgacgtgtcgttagcgcggctgcagagagctaatgtcgtggcgcagtcgcgcatc
tcgtttccagagaaggaactacttctgctaattcggaatcatcttttatctaaaggtctt
tctgacacggctacggctttaacgaaggaagctgagcttcccatggggctacatgcgcta
gcacattctagcgtgccgccgttcactcccgtttctgtggccacgcctccttctcctgcc
gccagcatccctcggactcctcggctcactaacggagttgcggctcgtttgggtggccac
acctctcatcacctgcagccccgcccctcgacctcacaggctccgcccccgccgtcgcct
gtcgtttctcaccacagcaacggctctccgctaatcgggcgaatcgtgttctcgcgggaa
cgaccgtcaccgtgtcccgccgctggagggaagaggccgaaagtgttgagacagaaatcg
gatcatggcgcttttattcagagtccggctatgaagaagcagctggaccgacatctgccc
tctccaccttctctagacagtataataacggagtatttgcgtgagcagcacgcgcgctgc
aagaacccggtgacgacgtgtccccccttcagcctgttcacccctcatcagtgtcccgag
cccaagcagagacgccaggcgcccaccaacttcaccccgcgacacactcgccgggtcgtg
taccccaaatacggcggagtggacggaggctgtttcgacaggcatctcatcttcagcagg
tttcgcccaatctcggtgttcagggaggctgaggaggatgagagtggcttcatgtgttgt
gcgttctcggctcgagagcggttcctgatgttgggcacgtgcaccggccagctcaaactc
tacaacgtgttcagtggacaagaggaggccagttacagctgccacagctccgccatcaca
cacctcgagccctccagagacggctcgctgctgttgacgtcagcatcttggagttacccg
ttatccgcgctgtgggggatgaagtctgtgttcatcatgaagcattccttcctggatgat
cattatgtggagttcagcaaactctctcaggacagagtcataggaaccaaagagcacatc
gcacatatatatgacatccagacaggacagaaaatcctgaccctcaataaccccgacctg
gccaacaactacaagcgcaactgtgccacgttcaaccccacggacgacctggtcctgaac
gacggggtcatgtgggacgttcgcacatctcaggccatccacaagttcgacaagttcaac
atgaacatcagtggcgttttccatcccaatggattagaggtcatcatcaacaccgagatc
tgggatctgaggacgtttcatctcctccacactgtgccggcgctggatcagtgcaggatc
gtcttcaacaacaacggaaccgtcatttatggagccatgttgcaggccgacgatgaggat
gacatgatggagcagcagatgaagagccccttcggatcctccttcaggaccttcgacgcc
accgactacaaacccatcgccaccattgatgtgaagaggaatatcttcgacctgtgcaca
gacaccaaagactgctatctggccgtcatcgagaatcaggactctataaacatggacact
gtgtgtcgtctgtatgaggtgggccgccagagactcgctgaggaggaggaggatgaagaa
gagcaggaggaggatgaccaggatgaagacgacgacgatgactctgatgatgacatcgat
gacatcgacaccgacccgctgctggccgagctgaacgagaacaacggcgaggaggacgga
gagcacgacttctctccgtccgacgatgaggaggtggcgcgcctcctggatgaagaggct
gacgacgacgatgatgacgacgatgatgatgacgatgatgatgacgacgacgacgatgat
gatgattctgatgataatgagcgagatgtggagcttgtgctggataacacagacagctct
gataactcggacctggaggacgacatcatccttgccctgaacgagtga
DBGET
integrated database retrieval system
