Pimephales promelas (fathead minnow): 120481278
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Entry
120481278 CDS
T08155
Symbol
mbd4
Name
(RefSeq) methyl-CpG-binding domain protein 4
KO
K10801
methyl-CpG-binding domain protein 4 [EC:3.2.2.-]
Organism
pprm
Pimephales promelas (fathead minnow)
Pathway
pprm03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
pprm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
120481278 (mbd4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pprm03036
]
120481278 (mbd4)
03400 DNA repair and recombination proteins [BR:
pprm03400
]
120481278 (mbd4)
Chromosome and associated proteins [BR:
pprm03036
]
Eukaryotic type
Heterochromatin formation proteins
MBPs (metylated DNA binding proteins)
120481278 (mbd4)
DNA repair and recombination proteins [BR:
pprm03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
120481278 (mbd4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MBD
HhH-GPD
Motif
Other DBs
NCBI-GeneID:
120481278
NCBI-ProteinID:
XP_039530792
LinkDB
All DBs
Position
Unknown
AA seq
331 aa
AA seq
DB search
MSISEAQRASGWRREIRVRQSGKTAGKVDVYIISPQGKIFRSKTELHRFLLSQTNVELQI
SDFDFSVSATQRTRRTLKEEDRAEVTADEDVCERRDEKREIGDERVNRLNPTVDEHSDIS
APESQEHDGLETTGGGEEENQSRKHTDCVSPSRNSENGLKLFAEKRKTSPYFSRGNNALS
RPKRKALRKWTPPRSPFNLVQETLFHDPWKLLVASIFLNKTSGKMAIPMLWEFFQRYPSA
EVTRASDWRPVSRLLKPLGLSTIRAKTLVRFSDEYLSKSWRYPIELHGIGKYGNDSFRIF
CVEEWREVTPDDHKLNDYHAWLWRNQERLGI
NT seq
996 nt
NT seq
+upstream
nt +downstream
nt
atgtcgatatctgaggcgcagagagcatcgggctggaggagagagataagagtgagacaa
agcggtaaaacagcggggaaagtcgatgtctacatcatcagtcctcagggcaagatcttc
cgatccaagactgagctgcacagattcctgctctcacagacaaacgtggagctgcagatc
agcgacttcgacttctccgtgtctgcgactcaacgaacgagaaggaccctgaaagaggaa
gaccgcgctgaagtgacggcagatgaagacgtgtgcgagcgccgagacgagaagagagag
atcggagacgaacgagtgaatcgattgaacccgactgtagatgaacattcagacatttct
gctccagagagccaagaacacgatgggttggagacgaccggaggaggtgaggaggaaaac
cagagccggaaacacacagactgtgtgtcgccttccagaaactcagagaacgggttgaag
ttatttgcagagaagcggaaaaccagtccgtacttcagtagagggaataatgctctgagc
cggccgaaacgcaaggccttgaggaagtggactccgcctcgctcacccttcaatttggtg
caggagacgctcttccacgacccctggaagctcctggtggcctccatcttcctcaacaag
accagcggtaagatggcgatcccgatgctgtgggagtttttccagcgttacccgagcgca
gaagtgacccgcgcgagcgactggaggcctgtgtcccgtttactgaagccactgggtctc
agtaccatccgcgccaaaacactcgtccgcttctctgacgagtatctgagtaaatcctgg
cggtatcccatcgagctccacggcatcgggaaatacggcaacgactcgttccggatcttc
tgtgtggaggagtggagagaggtgacgccagacgaccataagctcaacgactatcacgcc
tggctgtggagaaaccaggagcgcttaggaatctga
DBGET
integrated database retrieval system