Pimephales promelas (fathead minnow): 120481374
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Entry
120481374 CDS
T08155
Name
(RefSeq) SNW domain-containing protein 1-like
KO
K06063
SNW domain-containing protein 1
Organism
pprm
Pimephales promelas (fathead minnow)
Pathway
pprm03040
Spliceosome
pprm04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
pprm00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
120481374
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
120481374
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pprm03041
]
120481374
Spliceosome [BR:
pprm03041
]
Complex B
Other components
Prp19-related factors
120481374
Complex C
120481374
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SKIP_SNW
Motif
Other DBs
NCBI-GeneID:
120481374
NCBI-ProteinID:
XP_039530950
LinkDB
All DBs
Position
Unknown
AA seq
820 aa
AA seq
DB search
MSLLSFLPEPTQLSQDQLEAEERSRVQRSQSTASVSTRREPPPYGSRKSWMPRSLEDFGD
GGAFPEVHVPQYPLEMGRKKRTSNALAVQVDAEGKIKYDAIARQGQNKDKVVFSKNTDML
HEDHPELQKPDEETVKAITEKARAARNKLVSQKIAAAMPVRAADKQAPAQYIRYTPSQQG
LAFNSGAKQRVIRMVEMQKDPMEPPRFKINKKIPPGPPSPPAPVKETPRRKITVEKQQKW
KIPPCISNWKNAKGYTIPLDKRGPQTVHINENFAKLADALDNAEKKAREAVEMRAQVEKK
MAQKEKEKKEEKLRELAKMARDRRAGVKSHGDKGGEETEVRERDEIRHERRRERQHDRNI
SRAAPDKSFLPEPTQLSQDQLEAEERSRVQGSQSTASVSTRREPPPYGSRKSWVPRSLEQ
RQVVFSKYTHMLHEDHPELQKPDEETVKAITEKTRAALNKLVSQKIAAAMPVRAADKQAP
AQYIRYTPSQQGLAFNSGAKQRVIRMVEMQKDPMEPPRFKINKKIPPGPPSPPAPVKETP
RRKITVEEQQKWKIPPCISNWKNAKGYTIPLDKRGPQTVHINENFAKLADALDNAEKKAR
EAVEMRAQVEKKMAQKEKEKKEEKLRELAKMARDRRAGVKSHGDKGGEETEVRERDEIRH
ERRRERQHDRNISRAAPDKRSKLQRDQDRDISELIALGQPNPRTSSEAQYDQRLFNQSKG
MDSGFAGGTDEIYNVYDQPFRSGRDMAQNIYRPGSSRFVPDREFSGADHGPRRYGPVQFE
EDPFGLDKFFEEAKQHGGSKRASTSDRSKDYDHVKKRRKE
NT seq
2463 nt
NT seq
+upstream
nt +downstream
nt
atgtcgctgttaagttttctccctgaacccacccaactgtcccaggaccagttagaggcg
gaggagaggtctcgtgttcagaggtcacaatccactgcttcggtctccactcgcagagaa
cctcctccctacggctccaggaaatcatggatgccccggtcactagaggattttggagat
ggaggagcttttccagaggtccatgtgccccagtatcctctggaaatgggtaggaagaaa
aggacgtccaatgctctggcagtgcaggtggatgcagagggcaagatcaaatatgacgcc
attgctaggcaaggtcaaaacaaagacaaggttgtgttcagcaaaaacacagacatgctt
cacgaagatcatcccgagctgcagaaaccagatgaagagacggtgaaagcgattacagaa
aaggcccgagcagctcggaataaactggtctcgcagaaaattgcagcggccatgcctgta
cgtgctgcagacaaacaggccccagcacagtatattcggtacacaccctcccagcaagga
ctcgcgtttaactctggagcgaaacagagggtcatccgtatggtggaaatgcagaaagat
ccaatggaaccaccgcgattcaaaatcaataagaaaattcctcctggacctccatcccct
cctgctccagtcaaggaaactccaagaagaaaaataactgtggagaaacagcaaaagtgg
aagattccaccctgtatttccaactggaagaacgcaaagggttacaccattcctctggac
aagcgaggcccgcagaccgtccacatcaatgagaactttgccaagctggcggatgctttg
gacaatgcagaaaaaaaggccagagaggctgtggagatgagagctcaagtggaaaagaag
atggcccagaaagaaaaagaaaagaaagaagagaagctgagagagttggctaagatggcc
agagacaggagagctggagtcaaatcccatggtgacaaaggtggtgaagagacagaagtc
agggagcgtgatgagatccgtcacgagaggaggagagaaaggcagcacgacaggaacatc
tccagagccgcccctgataagagttttctccctgaacccacccaactgtcccaggaccag
ttagaggcggaggagaggtctcgtgttcaggggtcacaatccactgcttcggtctccact
cgcagagaacctcctccctacggctccaggaaatcatgggtgccccggtcactagagcag
agacaggttgtgttcagcaaatacacacacatgcttcacgaagatcatcccgagctgcag
aaaccagatgaagagacggtgaaagcgattacagaaaagacccgagcagctctgaataaa
ctggtctcgcagaaaattgcagcggccatgcctgtacgtgctgcagacaaacaggcccca
gcacagtatattcggtacacaccctcccagcaaggactcgcgtttaactctggagcgaaa
cagagggtcatccgtatggtggaaatgcagaaagatccaatggaaccaccgcgattcaaa
atcaataagaaaattcctcctggacctccatcccctcctgctccagtcaaggaaactcca
agaagaaaaataactgtggaagaacagcaaaagtggaagattccaccctgtatttccaac
tggaagaacgcaaagggttacaccattcctctggacaagcgaggcccgcagaccgtccac
atcaatgagaactttgccaagctggcggatgctttggacaatgcagaaaaaaaggccaga
gaggctgtggagatgagagctcaagtggaaaagaagatggcccagaaagaaaaagaaaag
aaagaagagaagctgagagagttggctaagatggccagagacaggagagctggagtcaaa
tcccacggtgacaaaggtggtgaagagacagaagtcagggagcgtgatgagatccgtcac
gagaggaggagagaaaggcagcacgacaggaacatctccagagccgcccctgataagagg
tcgaagctacaaagagatcaggacagggacatcagtgagctcattgccctgggacaaccg
aacccccgtacctccagtgaggctcagtatgaccagcgactcttcaatcagagcaagggg
atggacagtggttttgccggtggcacggatgagatttataatgtgtatgatcagcccttc
agaagtggccgagacatggcacagaatatctacaggcctgggagcagcaggtttgttcct
gatcgggagttctcgggtgcggaccatggcccccggcgctacggcccggtgcagttcgag
gaggatcctttcggtctggataagttctttgaggaagccaagcagcacggaggctccaag
agggcgtccactagtgaccgctcaaaggactacgaccacgtgaagaaacgcaggaaggag
tga
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